Miyakogusa Predicted Gene

Lj0g3v0054459.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0054459.2 Non Chatacterized Hit- tr|I3S0X9|I3S0X9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.46,0,HIT-like,HIT-like domain; HIT_2,Histidine triad (HIT)
protein; no description,HIT-like domain; coile,CUFF.2414.2
         (130 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g05590.1                                                       159   7e-40
Glyma11g31690.1                                                       153   5e-38
Glyma11g31700.1                                                       120   3e-28
Glyma18g05580.1                                                       111   2e-25
Glyma01g21740.1                                                        64   4e-11

>Glyma18g05590.1 
          Length = 192

 Score =  159 bits (402), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 88/165 (53%), Positives = 96/165 (58%), Gaps = 35/165 (21%)

Query: 1   MVNLRPLLPGNV-----------------------------------LICPKREVKRFVD 25
           MVNLRPLLPG+V                                   LICPKREVKRF D
Sbjct: 28  MVNLRPLLPGHVIQHNMFQGFQSLTARDFLVSSVSILIYGFIMFLHVLICPKREVKRFGD 87

Query: 26  LTAEETSDLWLTAQKVGRQLESYHKASSLTLAIQDGPQAGQTXXXXXXXXXXRRGGDFEN 85
           LTA+ETSDLWLTAQKVGRQLE+YHKASSLTLAIQDGPQAGQT          R+ GDFE 
Sbjct: 88  LTADETSDLWLTAQKVGRQLETYHKASSLTLAIQDGPQAGQTVPHVHIHLIPRKSGDFEK 147

Query: 86  NDEIYDAMXXXXXXXXXXXXXXXXXXXXTLGEMAQEADDYRKLFL 130
           NDEIYDA+                    +L EM+QEAD+YRKLFL
Sbjct: 148 NDEIYDAVDEKEKELKQKLDLDKERKDRSLEEMSQEADEYRKLFL 192


>Glyma11g31690.1 
          Length = 150

 Score =  153 bits (386), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 78/129 (60%), Positives = 88/129 (68%)

Query: 2   VNLRPLLPGNVLICPKREVKRFVDLTAEETSDLWLTAQKVGRQLESYHKASSLTLAIQDG 61
            NL   +  +VLIC KREVKRFVDLTA+ETSDLWLTAQKVG+QLESYHKASSLTLAIQDG
Sbjct: 22  TNLSYAMFLHVLICSKREVKRFVDLTADETSDLWLTAQKVGKQLESYHKASSLTLAIQDG 81

Query: 62  PQAGQTXXXXXXXXXXRRGGDFENNDEIYDAMXXXXXXXXXXXXXXXXXXXXTLGEMAQE 121
           PQAGQ           R+ GDFE NDEIYDA+                    +L +M+QE
Sbjct: 82  PQAGQMVPHVHIHLIPRKSGDFEKNDEIYDAIDEKEKELKQKLDLDKERKDRSLEDMSQE 141

Query: 122 ADDYRKLFL 130
           AD+YRKLFL
Sbjct: 142 ADEYRKLFL 150


>Glyma11g31700.1 
          Length = 161

 Score =  120 bits (302), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/134 (47%), Positives = 78/134 (58%), Gaps = 4/134 (2%)

Query: 1   MVNLRPLLPGNVL----ICPKREVKRFVDLTAEETSDLWLTAQKVGRQLESYHKASSLTL 56
            VNLRP +  + L    +   REVKR  DLT +ET DLWL A+K+GRQLESYHKASSLT 
Sbjct: 28  FVNLRPAVTVSYLKLNLVNLTREVKRVADLTDDETVDLWLIAKKLGRQLESYHKASSLTF 87

Query: 57  AIQDGPQAGQTXXXXXXXXXXRRGGDFENNDEIYDAMXXXXXXXXXXXXXXXXXXXXTLG 116
            IQDGPQAGQ+          R+ GD+ENND+IYD +                    ++ 
Sbjct: 88  CIQDGPQAGQSVPHVHIHILPRKSGDYENNDDIYDDINEKEKELNRALKVDIERKDRSIQ 147

Query: 117 EMAQEADDYRKLFL 130
           EMA EAD+YRK   
Sbjct: 148 EMALEADEYRKFVF 161


>Glyma18g05580.1 
          Length = 114

 Score =  111 bits (277), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/113 (50%), Positives = 67/113 (59%)

Query: 18  REVKRFVDLTAEETSDLWLTAQKVGRQLESYHKASSLTLAIQDGPQAGQTXXXXXXXXXX 77
           REVKR  DLT +ET DLW  A+K+GRQLESYHKASSL+  IQDGPQAGQT          
Sbjct: 2   REVKRVADLTDDETIDLWRIAKKLGRQLESYHKASSLSFGIQDGPQAGQTVPHVHIHILP 61

Query: 78  RRGGDFENNDEIYDAMXXXXXXXXXXXXXXXXXXXXTLGEMAQEADDYRKLFL 130
            + GD+ENND+IYD M                    ++ EMA EAD+YRK   
Sbjct: 62  WKSGDYENNDDIYDDMNEKEKELNRALKVDVERKDRSIEEMALEADEYRKFVF 114


>Glyma01g21740.1 
          Length = 202

 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/43 (79%), Positives = 36/43 (83%), Gaps = 1/43 (2%)

Query: 17  KREVKRFVDLTAEETSDLWLTAQKVGRQLESYHKASSLTLAIQ 59
           +REV  FVD TA+ETSDL  TAQKVG QLESYHKASSLT AIQ
Sbjct: 90  QREVMCFVDFTADETSDL-CTAQKVGEQLESYHKASSLTPAIQ 131