Miyakogusa Predicted Gene

Lj0g3v0048499.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0048499.1 CUFF.2246.1
         (119 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g29670.1                                                       134   2e-32

>Glyma10g29670.1 
          Length = 221

 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/125 (60%), Positives = 87/125 (69%), Gaps = 6/125 (4%)

Query: 1   MLQLVSTVAFNLKILSEPLNSLAGKIARGDSNGFRRLIGG-WRGK--PTRRKRGKQLAWF 57
           +LQL STVAFNLKIL EP NSLAG+IARGDS     L+GG  RGK  P RR   K+ AWF
Sbjct: 61  ILQLASTVAFNLKILPEPFNSLAGEIARGDSQTLSFLVGGGRRGKIAPNRRVTKKKSAWF 120

Query: 58  ASVYVA---GWWSWRVSRMDLFLKVLLFCGVGVSLFRLCQGKKAIKEWFLGFLFGIVLVI 114
           A V V    G WSWR+   DLFL+ L FC  G+SL RL  GKKA++EW LGF FG+VL++
Sbjct: 121 AFVLVCVAGGLWSWRIQEFDLFLRALSFCLAGISLLRLWLGKKAVREWVLGFFFGVVLIL 180

Query: 115 GSRFG 119
            SR G
Sbjct: 181 SSRLG 185