Miyakogusa Predicted Gene

Lj0g3v0048489.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0048489.2 Non Chatacterized Hit- tr|Q7VAI6|Q7VAI6_PROMA
Uncharacterized conserved protein OS=Prochlorococcus
m,45.45,1e-18,seg,NULL,CUFF.2243.2
         (182 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g32400.1                                                       224   3e-59
Glyma09g27230.1                                                       219   2e-57

>Glyma16g32400.1 
          Length = 243

 Score =  224 bits (571), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 120/184 (65%), Positives = 131/184 (71%), Gaps = 2/184 (1%)

Query: 1   MSCKINSLNPPIPCRFYXXXXXXXXXXXXXLC-SSDEQQKXXXXXXXXXXXXXXXYSVSF 59
           MSCKINSL+ PIPC+FY                 S E+Q+               Y+VSF
Sbjct: 1   MSCKINSLSSPIPCKFYTNKPKLRRTNTILFSFPSSEKQQKTISTSTSETPTTEAYTVSF 60

Query: 60  KTKRACKLGISRYPDFEYDAEGGMGTGPGAKVTENQ-ANNNDLLVSFDLETLYIPPLTSS 118
           KT++ CKLGISRYPDFEYDAEGGMGTG GAKVTEN    NNDL VSFDLETLYIPPLTSS
Sbjct: 61  KTEKGCKLGISRYPDFEYDAEGGMGTGVGAKVTENNNPANNDLPVSFDLETLYIPPLTSS 120

Query: 119 TTKFXXXXXXXXXKIDIVPQALQGSVNQESGKVDLEFKAKFLFSIGSLYKAPPLLVKTVL 178
           TTKF         KIDIVP+A  GS+NQESGKVDLEFKAKFLFS GSLYKAPPL+VKTVL
Sbjct: 121 TTKFLGFPLPPFLKIDIVPEAFHGSINQESGKVDLEFKAKFLFSAGSLYKAPPLMVKTVL 180

Query: 179 TTEE 182
           T+EE
Sbjct: 181 TSEE 184


>Glyma09g27230.1 
          Length = 238

 Score =  219 bits (557), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 116/184 (63%), Positives = 131/184 (71%), Gaps = 7/184 (3%)

Query: 1   MSCKINSLNPPIPCRFYXXXXXXXXXXXX--XLCSSDEQQKXXXXXXXXXXXXXXXYSVS 58
           M+CKINSL+ PIPC+ Y                 SS++QQK               Y+VS
Sbjct: 1   MNCKINSLSSPIPCKLYTKKPRLRRTNTILFSFSSSEKQQKTISTSTSIEA-----YTVS 55

Query: 59  FKTKRACKLGISRYPDFEYDAEGGMGTGPGAKVTENQANNNDLLVSFDLETLYIPPLTSS 118
           FKT++ CKLGISRYPDFEYDAEGG+GTG GAK T+N   NNDL VSFDLETLYIPPLTSS
Sbjct: 56  FKTEKGCKLGISRYPDFEYDAEGGIGTGVGAKDTKNDPANNDLPVSFDLETLYIPPLTSS 115

Query: 119 TTKFXXXXXXXXXKIDIVPQALQGSVNQESGKVDLEFKAKFLFSIGSLYKAPPLLVKTVL 178
           TTKF         KIDIVP+A QG++NQESGKVDLEFKAKFLFS  SLYKAPPL+VKTVL
Sbjct: 116 TTKFLGLPLPPFLKIDIVPEAFQGNINQESGKVDLEFKAKFLFSAASLYKAPPLMVKTVL 175

Query: 179 TTEE 182
           T+EE
Sbjct: 176 TSEE 179