Miyakogusa Predicted Gene
- Lj0g3v0045219.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0045219.1 Non Chatacterized Hit- tr|I3T6Q6|I3T6Q6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,74.8,0,SPERMIDINE_SYNTHASE_1,Spermidine/spermine synthases
family; NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SU,gene.g3291.t1.1
(385 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g18950.2 329 3e-90
Glyma13g18950.1 328 5e-90
Glyma02g03860.1 65 2e-10
Glyma01g03830.1 64 3e-10
Glyma17g22640.1 60 4e-09
Glyma10g39440.1 50 3e-06
Glyma08g39810.2 49 9e-06
>Glyma13g18950.2
Length = 396
Score = 329 bits (843), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 170/254 (66%), Positives = 183/254 (72%), Gaps = 59/254 (23%)
Query: 130 NTICGIVATVFGATGFLGRYVVQHLAKMGSQVLVPFRGSEDCHRHLKLMGDLGQI----- 184
+++ GI+ATVFGATGFLGRYVVQ LAKMGSQVLVPFRGSED RHLKLMGDLGQI
Sbjct: 58 SSVSGIIATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDNPRHLKLMGDLGQIVPMKY 117
Query: 185 -----------------------------------------------SKEHGGIMRFIQV 197
SKEHGGI+RFIQV
Sbjct: 118 NPRDESSVKAVMAKANVVINLIGRDYETRNYSFEEVHYHMAEQLAKISKEHGGILRFIQV 177
Query: 198 SCLGASPSSPSRMLRAKAAAEEAILRELPEATILKPATMIGTEDRILNRWAHFAKKYSFL 257
SCLGASPSSPSRMLR K+AAEE ILRELPEATILKPA MIGTEDRILN WAHFAKKY FL
Sbjct: 178 SCLGASPSSPSRMLRTKSAAEEMILRELPEATILKPAVMIGTEDRILNPWAHFAKKYGFL 237
Query: 258 PLFGDGSTKIQPVYVVDVANALTAALKDDGTSMGKVYELGGPE-------AELMYEVIRE 310
PLFGDGSTKIQPVYV+DVA ALT+ LKDDGTSMGK+YELGGPE A++M++ IRE
Sbjct: 238 PLFGDGSTKIQPVYVIDVAAALTSLLKDDGTSMGKIYELGGPEIFTVHELADVMFDTIRE 297
Query: 311 WPRYVKVPFPIAKA 324
WPRYVKVPFPIAKA
Sbjct: 298 WPRYVKVPFPIAKA 311
>Glyma13g18950.1
Length = 429
Score = 328 bits (841), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 170/254 (66%), Positives = 183/254 (72%), Gaps = 59/254 (23%)
Query: 130 NTICGIVATVFGATGFLGRYVVQHLAKMGSQVLVPFRGSEDCHRHLKLMGDLGQI----- 184
+++ GI+ATVFGATGFLGRYVVQ LAKMGSQVLVPFRGSED RHLKLMGDLGQI
Sbjct: 58 SSVSGIIATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDNPRHLKLMGDLGQIVPMKY 117
Query: 185 -----------------------------------------------SKEHGGIMRFIQV 197
SKEHGGI+RFIQV
Sbjct: 118 NPRDESSVKAVMAKANVVINLIGRDYETRNYSFEEVHYHMAEQLAKISKEHGGILRFIQV 177
Query: 198 SCLGASPSSPSRMLRAKAAAEEAILRELPEATILKPATMIGTEDRILNRWAHFAKKYSFL 257
SCLGASPSSPSRMLR K+AAEE ILRELPEATILKPA MIGTEDRILN WAHFAKKY FL
Sbjct: 178 SCLGASPSSPSRMLRTKSAAEEMILRELPEATILKPAVMIGTEDRILNPWAHFAKKYGFL 237
Query: 258 PLFGDGSTKIQPVYVVDVANALTAALKDDGTSMGKVYELGGPE-------AELMYEVIRE 310
PLFGDGSTKIQPVYV+DVA ALT+ LKDDGTSMGK+YELGGPE A++M++ IRE
Sbjct: 238 PLFGDGSTKIQPVYVIDVAAALTSLLKDDGTSMGKIYELGGPEIFTVHELADVMFDTIRE 297
Query: 311 WPRYVKVPFPIAKA 324
WPRYVKVPFPIAKA
Sbjct: 298 WPRYVKVPFPIAKA 311
>Glyma02g03860.1
Length = 340
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 40/53 (75%)
Query: 321 IAKAKKVLIIGGGDGGMLREVSRHPGVEQITMVEIDAGVVEFCRQYLPNHSAG 373
I+ KKVL+IGGGDGG+LREV+RH VE+I + EID VV+ +Q+ P+ + G
Sbjct: 124 ISNPKKVLVIGGGDGGVLREVARHASVEKIDICEIDKMVVDVSKQFFPDIAVG 176
>Glyma01g03830.1
Length = 338
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 39/53 (73%)
Query: 321 IAKAKKVLIIGGGDGGMLREVSRHPGVEQITMVEIDAGVVEFCRQYLPNHSAG 373
I KKVL+IGGGDGG+LREV+RH VE+I + EID VV+ +Q+ P+ + G
Sbjct: 122 IPNPKKVLVIGGGDGGVLREVARHASVEKIDICEIDKMVVDVSKQFFPDIAVG 174
>Glyma17g22640.1
Length = 76
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 327 VLIIGGGDGGMLREVSRHPGVEQITMVEIDAGVVEFCRQYLPNHSAG 373
VL+IGGGDGG+LREV+RH VE+I + EID VVE +Q+ P+ + G
Sbjct: 1 VLVIGGGDGGVLREVARHSSVEKIDIFEIDKMVVEVSKQFFPDIAVG 47
>Glyma10g39440.1
Length = 334
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 302 ELMYEVIREWPRYVKVPFPIAKAKKVLIIGGGDGGMLREVSRHPGVEQITMVEIDAGVVE 361
E +Y P + P P K V I+GGG+G RE+ RH + ++ M +ID VV
Sbjct: 87 EFIYHECLVHPALLHNPSP----KNVFIMGGGEGSTARELLRHKTINKVVMCDIDEEVVN 142
Query: 362 FCRQYL 367
FC+ YL
Sbjct: 143 FCKSYL 148
>Glyma08g39810.2
Length = 257
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 39/53 (73%)
Query: 321 IAKAKKVLIIGGGDGGMLREVSRHPGVEQITMVEIDAGVVEFCRQYLPNHSAG 373
I KKVL+IGGGDGG++REV+RH VE+I + EID VV+ +QY P+ + G
Sbjct: 40 IPNPKKVLVIGGGDGGVIREVARHSSVEKIDICEIDKMVVDVSKQYFPDVAVG 92