Miyakogusa Predicted Gene
- Lj0g3v0042719.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0042719.1 Non Chatacterized Hit- tr|C6T2R2|C6T2R2_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,89.08,0,ZF_RING_2,Zinc finger, RING-type; seg,NULL; no
description,Zinc finger, RING/FYVE/PHD-type;
zf-rbx1,,NODE_31641_length_677_cov_60.376663.path1.1
(119 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma12g10750.1 192 7e-50
Glyma06g45990.1 192 7e-50
Glyma13g38420.1 192 8e-50
Glyma12g32060.1 185 1e-47
Glyma12g32060.4 184 2e-47
Glyma12g10750.2 113 4e-26
Glyma12g32060.2 108 1e-24
Glyma12g32060.3 107 4e-24
Glyma18g19000.1 84 4e-17
Glyma01g13960.1 79 8e-16
Glyma20g22300.1 50 4e-07
Glyma10g28310.2 50 4e-07
Glyma10g28310.1 50 4e-07
Glyma13g34030.2 50 5e-07
Glyma13g34030.1 50 5e-07
>Glyma12g10750.1
Length = 116
Score = 192 bits (488), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 94/119 (78%), Positives = 97/119 (81%), Gaps = 3/119 (2%)
Query: 1 MATLDSDVQMVXXXXXXXXXXXXXXXXXXXXRFEIKKWNAVALWAWDIVVDNCAICRNHI 60
MATLDSDV MV RFEIKKWNAVALWAWDIVVDNCAICRNHI
Sbjct: 1 MATLDSDVPMVPAGEPSSSAGPSSKKPK---RFEIKKWNAVALWAWDIVVDNCAICRNHI 57
Query: 61 MDRCIECQANQASSTADECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 119
MD CIECQANQAS+T++ECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 58 MDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 116
>Glyma06g45990.1
Length = 116
Score = 192 bits (488), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 94/119 (78%), Positives = 97/119 (81%), Gaps = 3/119 (2%)
Query: 1 MATLDSDVQMVXXXXXXXXXXXXXXXXXXXXRFEIKKWNAVALWAWDIVVDNCAICRNHI 60
MATLDSDV MV RFEIKKWNAVALWAWDIVVDNCAICRNHI
Sbjct: 1 MATLDSDVPMVPAGEPSSSAGPSSKKPK---RFEIKKWNAVALWAWDIVVDNCAICRNHI 57
Query: 61 MDRCIECQANQASSTADECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 119
MD CIECQANQAS+T++ECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 58 MDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 116
>Glyma13g38420.1
Length = 118
Score = 192 bits (487), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 93/119 (78%), Positives = 97/119 (81%), Gaps = 1/119 (0%)
Query: 1 MATLDSDVQMVXXXXXXXXXXXXXXXXXXXXRFEIKKWNAVALWAWDIVVDNCAICRNHI 60
MATLDSDV MV RFEIKKWNAV+LWAWDIVVDNCAICRNHI
Sbjct: 1 MATLDSDVTMVPAGEPSTSAGPSSSTKKPK-RFEIKKWNAVSLWAWDIVVDNCAICRNHI 59
Query: 61 MDRCIECQANQASSTADECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 119
MD CIECQANQAS+T++ECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 60 MDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
>Glyma12g32060.1
Length = 118
Score = 185 bits (469), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/119 (77%), Positives = 96/119 (80%), Gaps = 1/119 (0%)
Query: 1 MATLDSDVQMVXXXXXXXXXXXXXXXXXXXXRFEIKKWNAVALWAWDIVVDNCAICRNHI 60
MATLDSDV V RFEIKKWNAV+LWAWDIVVDNCAICRNHI
Sbjct: 1 MATLDSDV-TVFPAGEASSSAGPSSSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHI 59
Query: 61 MDRCIECQANQASSTADECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 119
MD CIECQANQAS+T++ECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 60 MDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
>Glyma12g32060.4
Length = 118
Score = 184 bits (468), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/119 (76%), Positives = 96/119 (80%), Gaps = 1/119 (0%)
Query: 1 MATLDSDVQMVXXXXXXXXXXXXXXXXXXXXRFEIKKWNAVALWAWDIVVDNCAICRNHI 60
MATLDSDV V RFEIKKWNAV+LWAWDIVVDNCAICRNHI
Sbjct: 1 MATLDSDV-TVFPAGEASSSAGPSSSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHI 59
Query: 61 MDRCIECQANQASSTADECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 119
MD CIECQANQAS+T++ECTVAWG+CNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 60 MDLCIECQANQASATSEECTVAWGICNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
>Glyma12g10750.2
Length = 91
Score = 113 bits (283), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Query: 1 MATLDSDVQMVXXXXXXXXXXXXXXXXXXXXRFEIKKWNAVALWAWDIVVDNCAICRNHI 60
MATLDSDV MV RFEIKKWNAVALWAWDIVVDNCAICRNHI
Sbjct: 1 MATLDSDVPMVPAGEPSSSAGPSSKKPK---RFEIKKWNAVALWAWDIVVDNCAICRNHI 57
Query: 61 MDRCIECQANQASSTADECTVAW 83
MD CIECQANQAS+T++ECTVAW
Sbjct: 58 MDLCIECQANQASATSEECTVAW 80
>Glyma12g32060.2
Length = 85
Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 1 MATLDSDVQMVXXXXXXXXXXXXXXXXXXXXRFEIKKWNAVALWAWDIVVDNCAICRNHI 60
MATLDSDV V RFEIKKWNAV+LWAWDIVVDNCAICRNHI
Sbjct: 1 MATLDSDVT-VFPAGEASSSAGPSSSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHI 59
Query: 61 MDRCIECQANQASSTADECTVAWGV 85
MD CIECQANQAS+T++ECTVAWG
Sbjct: 60 MDLCIECQANQASATSEECTVAWGT 84
>Glyma12g32060.3
Length = 93
Score = 107 bits (266), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 1 MATLDSDVQMVXXXXXXXXXXXXXXXXXXXXRFEIKKWNAVALWAWDIVVDNCAICRNHI 60
MATLDSDV V RFEIKKWNAV+LWAWDIVVDNCAICRNHI
Sbjct: 1 MATLDSDVT-VFPAGEASSSAGPSSSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHI 59
Query: 61 MDRCIECQANQASSTADECTVAWGVCNHAFHF 92
MD CIECQANQAS+T++ECTVAW + +
Sbjct: 60 MDLCIECQANQASATSEECTVAWADGSRPVKY 91
>Glyma18g19000.1
Length = 146
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
Query: 1 MATLDSDVQMVXXXXXXXXXXXXXXXXXXXXRFEIKKWNAVALWAWDIVVDNCAICRNHI 60
MATLDSDV V RF+IKKWN V+LWAW+IVVDNCAICRNHI
Sbjct: 1 MATLDSDVT-VFPVGKASSSGGPSLSNKKLKRFKIKKWNVVSLWAWNIVVDNCAICRNHI 59
Query: 61 MD--RCIECQANQASSTADECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQK 116
MD + IECQAN+AS+ ++ECTVAW +F + R + +V E F++
Sbjct: 60 MDLYKRIECQANEASAISEECTVAWVKTGPSFVDAAVGRIAQGTRVLAEGGYEKIFRQ 117
>Glyma01g13960.1
Length = 85
Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 1 MATLDSDVQMVXXXXXXXXXXXXXXXXXXXXRFEIKKWNAVALWAWDIVVDNCAICRNHI 60
MATLD DV MV FEIKKWN V LWAWDIVVDNCAIC NHI
Sbjct: 1 MATLDFDVPMVPTGEPSSNVGPSSKKPK---HFEIKKWNVVTLWAWDIVVDNCAICWNHI 57
Query: 61 MDRCIECQANQ----ASSTADECTVAW 83
MD C + Q +S+T++ECTVAW
Sbjct: 58 MDLCKKFHFFQLKTASSATSEECTVAW 84
>Glyma20g22300.1
Length = 57
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 75 TADECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQ 115
D+C + WGVCNHAFH HCI +W+ ++ CP+ EW+F+
Sbjct: 13 PGDDCPLIWGVCNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK 56
>Glyma10g28310.2
Length = 57
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 75 TADECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQ 115
D+C + WGVCNHAFH HCI +W+ ++ CP+ EW+F+
Sbjct: 13 PGDDCPLIWGVCNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK 56
>Glyma10g28310.1
Length = 57
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 75 TADECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQ 115
D+C + WGVCNHAFH HCI +W+ ++ CP+ EW+F+
Sbjct: 13 PGDDCPLIWGVCNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK 56
>Glyma13g34030.2
Length = 57
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 75 TADECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQ 115
D+C + WGVCNHAFH HCI +W+ ++ CP+ EW+F+
Sbjct: 13 PGDDCPLIWGVCNHAFHLHCILKWVHSQTSQAHCPMCRREWQFK 56
>Glyma13g34030.1
Length = 57
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 75 TADECTVAWGVCNHAFHFHCISRWLKTRQV---CPLDNSEWEFQ 115
D+C + WGVCNHAFH HCI +W+ ++ CP+ EW+F+
Sbjct: 13 PGDDCPLIWGVCNHAFHLHCILKWVHSQTSQAHCPMCRREWQFK 56