Miyakogusa Predicted Gene

Lj0g3v0038729.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0038729.1 Non Chatacterized Hit- tr|I1N5D0|I1N5D0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50832 PE,80,0,Riboflavin
synthase domain-like,Riboflavin synthase-like beta-barrel;
FAD_binding_1,FAD-binding, typ,CUFF.1743.1
         (149 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g53510.1                                                       241   2e-64
Glyma08g47950.1                                                       144   3e-35
Glyma14g36070.1                                                        74   7e-14
Glyma06g10180.2                                                        73   1e-13
Glyma06g10180.1                                                        73   1e-13
Glyma04g10200.1                                                        72   1e-13
Glyma17g07050.1                                                        72   3e-13
Glyma17g07050.2                                                        72   3e-13
Glyma13g00990.1                                                        70   7e-13

>Glyma18g53510.1 
          Length = 627

 Score =  241 bits (614), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 116/145 (80%), Positives = 123/145 (84%), Gaps = 5/145 (3%)

Query: 1   MSFFATAEHERERLKYFASAEGRDDMYQYNQKERRTVLEVLEDFPSVQMPFEWLVQLVPP 60
           MSFFATAEHERERLKYFAS EGRDD+YQYNQKERRTVLEVLEDFPSVQMPFEWLVQLVPP
Sbjct: 341 MSFFATAEHERERLKYFASPEGRDDLYQYNQKERRTVLEVLEDFPSVQMPFEWLVQLVPP 400

Query: 61  LKTRAFSISSSQLAHPNQVHLTVNVVSWTTPYKRKKKGLCSSWLAALDPRDAVYIPVWFL 120
           LK RAFSISSSQ AHPNQVHLTVNVVSWTTPYKRKKKGLCSSWLAALDP D +++P WF 
Sbjct: 401 LKPRAFSISSSQSAHPNQVHLTVNVVSWTTPYKRKKKGLCSSWLAALDPCDGIHVPTWF- 459

Query: 121 NSRLHSSLVPQRFPSNTITITSPHT 145
               H  L+P   PS  + +  P T
Sbjct: 460 ----HKGLLPTPSPSLPLILVGPGT 480


>Glyma08g47950.1 
          Length = 314

 Score =  144 bits (363), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 84/158 (53%), Positives = 99/158 (62%), Gaps = 35/158 (22%)

Query: 1   MSFFATAEHERERLKYFASAEGRDDMYQYNQKERRTVLEV------------LEDFPSVQ 48
           MSFF TAEHERERL+YFAS EGRDD++        TV+++            +ED PSVQ
Sbjct: 34  MSFFETAEHERERLEYFASPEGRDDLFHL------TVIQISLDSLFFIFCLAIEDIPSVQ 87

Query: 49  MPFEWLVQLVPPLKTRAFSISSSQLAHPNQVHLTVNVVSWTTPYKRKKKGLCSSWLAALD 108
           M FEWLVQLVPPL+ RAFSISSSQ AHPNQVHLTVNVVSWTTPYKR+KK           
Sbjct: 88  MRFEWLVQLVPPLQPRAFSISSSQSAHPNQVHLTVNVVSWTTPYKREKKRTM-------- 139

Query: 109 PRDAVYIPV-WFLNSRLHSSLVPQRFPSNTITITSPHT 145
               ++I + WF     H  L+P   PS  + +  P T
Sbjct: 140 ---LLFISISWF-----HKGLLPTPSPSLPLILVGPGT 169


>Glyma14g36070.1 
          Length = 689

 Score = 73.6 bits (179), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 10/133 (7%)

Query: 2   SFFATAEH-----ERERLKYFASAEGRDDMYQYNQKERRTVLEVLEDFPSVQMPFE-WLV 55
           S  A A H     E +RL + +S +G+D+  ++    +R++LEV+ +FPS + P   +  
Sbjct: 399 SLVALAAHTSEPSEADRLTFLSSPQGKDEYSKWLVGSQRSLLEVMAEFPSAKPPLGVFFA 458

Query: 56  QLVPPLKTRAFSISSSQLAHPNQVHLTVNVVSWTTPYKRKKKGLCSSWLAALDP----RD 111
            + P L+ R +SISSS    P +VH+T  +V   TP  R  KG+CS+W+    P    RD
Sbjct: 459 AVAPHLQPRYYSISSSPRFSPQKVHVTCALVCGPTPTGRIHKGVCSTWMKNAIPLEKSRD 518

Query: 112 AVYIPVWFLNSRL 124
             + P++   S  
Sbjct: 519 CSWAPIFIRTSNF 531


>Glyma06g10180.2 
          Length = 691

 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 62/101 (61%), Gaps = 1/101 (0%)

Query: 5   ATAEHERERLKYFASAEGRDDMYQYNQKERRTVLEVLEDFPSVQMPFE-WLVQLVPPLKT 63
           A+   E ERLK+ +S +G+D+  ++    +R++LEV+ +FPS + P   +   + P L+ 
Sbjct: 409 ASEPSEAERLKFLSSPQGKDEYSKWVVGSQRSLLEVMAEFPSAKPPLGVFFAAVAPRLQP 468

Query: 64  RAFSISSSQLAHPNQVHLTVNVVSWTTPYKRKKKGLCSSWL 104
           R +SISSS    P +VH+T  +V   TP  R  KG+CS+W+
Sbjct: 469 RYYSISSSPRFAPQRVHVTCALVYGPTPTGRIHKGVCSTWM 509


>Glyma06g10180.1 
          Length = 691

 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 62/101 (61%), Gaps = 1/101 (0%)

Query: 5   ATAEHERERLKYFASAEGRDDMYQYNQKERRTVLEVLEDFPSVQMPFE-WLVQLVPPLKT 63
           A+   E ERLK+ +S +G+D+  ++    +R++LEV+ +FPS + P   +   + P L+ 
Sbjct: 409 ASEPSEAERLKFLSSPQGKDEYSKWVVGSQRSLLEVMAEFPSAKPPLGVFFAAVAPRLQP 468

Query: 64  RAFSISSSQLAHPNQVHLTVNVVSWTTPYKRKKKGLCSSWL 104
           R +SISSS    P +VH+T  +V   TP  R  KG+CS+W+
Sbjct: 469 RYYSISSSPRFAPQRVHVTCALVYGPTPTGRIHKGVCSTWM 509


>Glyma04g10200.1 
          Length = 691

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 66/115 (57%), Gaps = 5/115 (4%)

Query: 10  ERERLKYFASAEGRDDMYQYNQKERRTVLEVLEDFPSVQMPFE-WLVQLVPPLKTRAFSI 68
           E ERLK+ +S +G+D+  ++    +R++LEV+ +FPS + P   +   + P L+ R +SI
Sbjct: 414 EAERLKFLSSPQGKDEYSKWVVGSQRSLLEVMAEFPSAKPPLGVFFAAVAPRLQPRYYSI 473

Query: 69  SSSQLAHPNQVHLTVNVVSWTTPYKRKKKGLCSSWLAALDPR----DAVYIPVWF 119
           SSS    P +VH+T  +V   TP  R  KG+CS+W+    P     D  + P++ 
Sbjct: 474 SSSPRFAPQRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEKSPDCCWAPIFI 528


>Glyma17g07050.1 
          Length = 707

 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 15/144 (10%)

Query: 10  ERERLKYFASAEGRDDMYQYNQKERRTVLEVLEDFPSVQMPFE-WLVQLVPPLKTRAFSI 68
           E +RL++ AS  G+D+  ++    +R++LEV+ +FPS + P   +   + P L+ R +SI
Sbjct: 430 EADRLRHLASPAGKDEYSEWVIASQRSLLEVMAEFPSAKPPIGVFFAAVAPRLQPRFYSI 489

Query: 69  SSSQLAHPNQVHLTVNVVSWTTPYKRKKKGLCSSWLAALDP----RDAVYIPVWFLNSRL 124
           SSS    PN++H+T  +V    P  R  KG+CS+W+    P    +D  + P++   S  
Sbjct: 490 SSSPRMVPNRIHVTCALVHEKMPTGRIHKGVCSTWMKNSVPLEKSQDCSWAPIFVRTSNF 549

Query: 125 HSSLVPQRFPSNT---ITITSPHT 145
                  R PS+    I +  P T
Sbjct: 550 -------RLPSDNKVPIIMIGPGT 566


>Glyma17g07050.2 
          Length = 686

 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 15/144 (10%)

Query: 10  ERERLKYFASAEGRDDMYQYNQKERRTVLEVLEDFPSVQMPFE-WLVQLVPPLKTRAFSI 68
           E +RL++ AS  G+D+  ++    +R++LEV+ +FPS + P   +   + P L+ R +SI
Sbjct: 430 EADRLRHLASPAGKDEYSEWVIASQRSLLEVMAEFPSAKPPIGVFFAAVAPRLQPRFYSI 489

Query: 69  SSSQLAHPNQVHLTVNVVSWTTPYKRKKKGLCSSWLAALDP----RDAVYIPVWFLNSRL 124
           SSS    PN++H+T  +V    P  R  KG+CS+W+    P    +D  + P++   S  
Sbjct: 490 SSSPRMVPNRIHVTCALVHEKMPTGRIHKGVCSTWMKNSVPLEKSQDCSWAPIFVRTSNF 549

Query: 125 HSSLVPQRFPSNT---ITITSPHT 145
                  R PS+    I +  P T
Sbjct: 550 -------RLPSDNKVPIIMIGPGT 566


>Glyma13g00990.1 
          Length = 707

 Score = 70.5 bits (171), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 15/144 (10%)

Query: 10  ERERLKYFASAEGRDDMYQYNQKERRTVLEVLEDFPSVQMPFE-WLVQLVPPLKTRAFSI 68
           E +RL++ AS  G+D+  ++    +R++LEV+ +FPS + P   +   + P L+ R +SI
Sbjct: 430 EADRLRHLASPAGKDEYSEWVITSQRSLLEVMAEFPSAKPPIGVFFAAVAPRLQPRFYSI 489

Query: 69  SSSQLAHPNQVHLTVNVVSWTTPYKRKKKGLCSSWLAALDP----RDAVYIPVWFLNSRL 124
           SSS    PN++H+T  +V    P  R  KG+CS+W+    P    +D  + P++   S  
Sbjct: 490 SSSPRMVPNRIHVTCALVHDKMPTGRIHKGVCSTWMKNSVPLEKSQDCSWAPIFVRTSNF 549

Query: 125 HSSLVPQRFPSNT---ITITSPHT 145
                  R P++    I +  P T
Sbjct: 550 -------RLPADNKVPIIMIGPGT 566