Miyakogusa Predicted Gene

Lj0g3v0036659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0036659.1 Non Chatacterized Hit- tr|D7KQA7|D7KQA7_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,62.5,9e-19,SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN,SSXT;
coiled-coil,NULL; SSXT,SSXT;
seg,NULL,NODE_47957_length_1049_cov_14.057198.path1.1
         (203 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g30650.1                                                       116   2e-26
Glyma20g36960.1                                                       115   4e-26
Glyma03g40930.2                                                       114   6e-26
Glyma19g43580.1                                                       114   6e-26
Glyma03g40930.1                                                       114   7e-26
Glyma16g02310.5                                                        84   1e-16
Glyma16g02310.4                                                        84   1e-16
Glyma16g02310.3                                                        84   1e-16
Glyma16g02310.2                                                        84   1e-16
Glyma16g02310.1                                                        84   1e-16
Glyma07g05720.4                                                        84   1e-16
Glyma07g05720.3                                                        84   1e-16
Glyma07g05720.2                                                        84   1e-16
Glyma07g05720.1                                                        84   1e-16
Glyma07g05720.5                                                        74   2e-13
Glyma06g13940.1                                                        65   5e-11

>Glyma10g30650.1 
          Length = 212

 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/77 (76%), Positives = 62/77 (80%), Gaps = 1/77 (1%)

Query: 13 ASYYTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          A+YY NN VT+DHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS
Sbjct: 13 AAYYPNN-VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 71

Query: 73 XXXXXXXXXXXXXSGIV 89
                       SG+V
Sbjct: 72 QPQPSPLAGQYPSSGLV 88


>Glyma20g36960.1 
          Length = 212

 Score =  115 bits (287), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 58/77 (75%), Positives = 62/77 (80%), Gaps = 1/77 (1%)

Query: 13 ASYYTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          A+YY NN VT+DHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS
Sbjct: 13 AAYYPNN-VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 71

Query: 73 XXXXXXXXXXXXXSGIV 89
                       SG++
Sbjct: 72 QPQPSPMPGQYPSSGLM 88


>Glyma03g40930.2 
          Length = 202

 Score =  114 bits (285), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 57/77 (74%), Positives = 62/77 (80%), Gaps = 1/77 (1%)

Query: 13 ASYYTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          A+YY NN VT+DHIQQYLDENKSLILKIVESQNSGKLSECAENQ+RLQRNLMYLAAIADS
Sbjct: 13 AAYYPNN-VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADS 71

Query: 73 XXXXXXXXXXXXXSGIV 89
                       SG++
Sbjct: 72 QPQPPTMPGQYPPSGMM 88


>Glyma19g43580.1 
          Length = 210

 Score =  114 bits (285), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 57/77 (74%), Positives = 62/77 (80%), Gaps = 1/77 (1%)

Query: 13 ASYYTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          A+YY NN VT+DHIQQYLDENKSLILKIVESQNSGKLSECAENQ+RLQRNLMYLAAIADS
Sbjct: 13 AAYYPNN-VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADS 71

Query: 73 XXXXXXXXXXXXXSGIV 89
                       SG++
Sbjct: 72 QPQPPTMSGQYPPSGMM 88


>Glyma03g40930.1 
          Length = 225

 Score =  114 bits (285), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 57/77 (74%), Positives = 62/77 (80%), Gaps = 1/77 (1%)

Query: 13 ASYYTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          A+YY NN VT+DHIQQYLDENKSLILKIVESQNSGKLSECAENQ+RLQRNLMYLAAIADS
Sbjct: 13 AAYYPNN-VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADS 71

Query: 73 XXXXXXXXXXXXXSGIV 89
                       SG++
Sbjct: 72 QPQPPTMPGQYPPSGMM 88


>Glyma16g02310.5 
          Length = 181

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 35/57 (61%), Positives = 49/57 (85%)

Query: 16 YTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          +   N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+
Sbjct: 14 FPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADA 70


>Glyma16g02310.4 
          Length = 210

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 35/57 (61%), Positives = 49/57 (85%)

Query: 16 YTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          +   N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+
Sbjct: 14 FPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADA 70


>Glyma16g02310.3 
          Length = 210

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 35/57 (61%), Positives = 49/57 (85%)

Query: 16 YTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          +   N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+
Sbjct: 14 FPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADA 70


>Glyma16g02310.2 
          Length = 210

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 35/57 (61%), Positives = 49/57 (85%)

Query: 16 YTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          +   N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+
Sbjct: 14 FPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADA 70


>Glyma16g02310.1 
          Length = 210

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 35/57 (61%), Positives = 49/57 (85%)

Query: 16 YTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          +   N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+
Sbjct: 14 FPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADA 70


>Glyma07g05720.4 
          Length = 213

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 35/57 (61%), Positives = 49/57 (85%)

Query: 16 YTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          +   N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+
Sbjct: 14 FPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADA 70


>Glyma07g05720.3 
          Length = 213

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 35/57 (61%), Positives = 49/57 (85%)

Query: 16 YTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          +   N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+
Sbjct: 14 FPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADA 70


>Glyma07g05720.2 
          Length = 213

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 35/57 (61%), Positives = 49/57 (85%)

Query: 16 YTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          +   N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+
Sbjct: 14 FPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADA 70


>Glyma07g05720.1 
          Length = 213

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 35/57 (61%), Positives = 49/57 (85%)

Query: 16 YTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          +   N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+
Sbjct: 14 FPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADA 70


>Glyma07g05720.5 
          Length = 190

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/47 (68%), Positives = 42/47 (89%)

Query: 26 IQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          + QYLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+
Sbjct: 1  MMQYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADA 47


>Glyma06g13940.1 
          Length = 195

 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 44/60 (73%)

Query: 13 ASYYTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
           S+ +   +T++ IQ+YL+ENK LIL I+E QN GK +E A+ Q++LQ NL +LA +AD+
Sbjct: 6  PSFPSVPTLTTEQIQKYLEENKELILAILEHQNMGKFTEIAQCQAKLQHNLTFLAKLADA 65