Miyakogusa Predicted Gene

Lj0g3v0035909.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0035909.1 tr|F4HRS2|F4HRS2_ARATH HEAT repeat-containing
protein OS=Arabidopsis thaliana GN=SWEETIE PE=4 SV=1,40.91,6e-19,
,CUFF.1578.1
         (136 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g53520.1                                                       226   5e-60
Glyma18g41790.1                                                       177   2e-45

>Glyma18g53520.1 
          Length = 1113

 Score =  226 bits (576), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 107/131 (81%), Positives = 115/131 (87%), Gaps = 3/131 (2%)

Query: 1   MCLCLSPKRKWNMFLDGLQSPIVSSKLRPCLDESWPVILQALALDAVPVNSEGNDYPKAL 60
           +CLCL+PKRKWN+FLDGLQSPIVSSKLRPCLDESWPVILQALALDAVPVNSEGN+   A 
Sbjct: 178 ICLCLTPKRKWNLFLDGLQSPIVSSKLRPCLDESWPVILQALALDAVPVNSEGNE---AS 234

Query: 61  ASNAEKHGVTSCQYSMVELKFEDFKFLWGFSLLGLFQSQHPILYRPIIQLDFANAKHGAN 120
             N +KH  T+ QYSMVELK EDFKFLWGFSLLGLFQSQHPI+ RPIIQL F NAKHG N
Sbjct: 235 VENTQKHSATTYQYSMVELKCEDFKFLWGFSLLGLFQSQHPIICRPIIQLAFVNAKHGGN 294

Query: 121 SPSNEVKPSGV 131
            PSNEVKPSG+
Sbjct: 295 LPSNEVKPSGL 305


>Glyma18g41790.1 
          Length = 193

 Score =  177 bits (450), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 90/121 (74%), Positives = 98/121 (80%), Gaps = 4/121 (3%)

Query: 6   SPKRKWNMFLDGLQSPIVSSKLRPCLDESWPVILQALALDAVPVNSEGNDYPKALASNAE 65
           +PKRK N+FLDGLQSPIVSSKL PCLDE W VILQALALDA+PVNSEGN+   AL  N +
Sbjct: 24  TPKRKGNVFLDGLQSPIVSSKLCPCLDE-WLVILQALALDAIPVNSEGNE---ALVENTQ 79

Query: 66  KHGVTSCQYSMVELKFEDFKFLWGFSLLGLFQSQHPILYRPIIQLDFANAKHGANSPSNE 125
           KH  T+ QYSMVELK EDFKFLWGFSLLGLFQ QHPI+YRPIIQ  F  AKHG N P+  
Sbjct: 80  KHSATTYQYSMVELKCEDFKFLWGFSLLGLFQLQHPIIYRPIIQPAFVKAKHGGNLPNLS 139

Query: 126 V 126
           V
Sbjct: 140 V 140