Miyakogusa Predicted Gene

Lj0g3v0033009.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0033009.1 tr|F2DY84|F2DY84_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,27.96,1e-17,SUBFAMILY NOT NAMED,NULL; APOSPORY-ASSOCIATED PROTEIN
C-RELATED,NULL; seg,NULL; no description,Glyco,CUFF.1453.1
         (386 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g26900.1                                                       530   e-150
Glyma02g07880.1                                                       338   5e-93
Glyma16g04600.1                                                       118   1e-26
Glyma19g28700.1                                                       112   9e-25
Glyma19g09050.1                                                        51   3e-06

>Glyma16g26900.1 
          Length = 381

 Score =  530 bits (1364), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 274/393 (69%), Positives = 312/393 (79%), Gaps = 23/393 (5%)

Query: 1   MALSSIFCSTRLISTSLVT----VNSASHTCY--VPHKQRKSEFPLPAVASVPYQPINYD 54
           MALSS+F STR I T  VT    + S+  TC   +PHK+   +FPLPAVASVPYQPIN+D
Sbjct: 3   MALSSLFFSTRFIPTPFVTSTRNIPSSPRTCASCIPHKR---DFPLPAVASVPYQPINFD 59

Query: 55  YLQEEFNGLGVTFEEAGGDSCMAKMELKNGSTATLLLPSGLITSYKAPMWHGGKVELLHT 114
           YLQEEF+G GVTFE    DSC+AKMELKNGS  T++LPSGLITSYKAPMWHGGK+ELLHT
Sbjct: 60  YLQEEFSGHGVTFEGVE-DSCIAKMELKNGSIVTMMLPSGLITSYKAPMWHGGKLELLHT 118

Query: 115 AVSEGEYGHAIIQGGVSLNFNFQTIHDDDGE-SWSPTNWVLHNIKGNAEESIQVELINRA 173
            VSEGEYG AIIQGGVSLNFNFQT   DDGE SWSPTNWVLH I+GNA ESIQVEL NR 
Sbjct: 119 NVSEGEYGDAIIQGGVSLNFNFQT---DDGEFSWSPTNWVLHKIQGNANESIQVELTNRT 175

Query: 174 AEDKIGLKYIVTLEEDVLSSELEISNPKSLPLQMIGSILSHLTVSTPEATYAIGLERSNY 233
           ++DKIGLKYIVTLE+D L+SE+EISN KSLP+QM GSILSHLTVS+PEATYA+GLERSNY
Sbjct: 176 SDDKIGLKYIVTLEKDALNSEVEISNKKSLPVQMTGSILSHLTVSSPEATYALGLERSNY 235

Query: 234 CIKPPFESGFVLSPPDSGQEEGDGKIWNSSPLKQLFPRWGANSQNXXXXXXXXXXXXXXX 293
           C KP FES F+LSPPD GQEEG GKI     ++QLFP+WG   QN               
Sbjct: 236 CSKPLFESEFMLSPPD-GQEEGFGKI-----VEQLFPQWGTKDQN---NGSEGSQSEEMD 286

Query: 294 XXXXXYKQLRDKLSLVYTNAPRSFTVIDRGRRNSVVIGRNGFEETYLYSPGSRVESYSKD 353
                YKQL +KLS VYT+ PR+FTVIDRGRRNSV +GR GF+E YL+SPGSRVE YSK 
Sbjct: 287 EEIDNYKQLSEKLSHVYTDVPRNFTVIDRGRRNSVSVGRTGFDEMYLFSPGSRVEIYSKY 346

Query: 354 AYICVGQAAVLQPIVLGPEEVWKGGQYLQNPNL 386
           +YICVGQAA+L+PI+L PE+VW+GGQY+ NPNL
Sbjct: 347 SYICVGQAAILKPIILSPEDVWRGGQYIHNPNL 379


>Glyma02g07880.1 
          Length = 279

 Score =  338 bits (868), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 186/284 (65%), Positives = 209/284 (73%), Gaps = 29/284 (10%)

Query: 1   MALSSIFCSTRLISTSLVT----VNSASHTCYVPHKQRKSEFPLPAVASVPYQPIN-YDY 55
           MALSS+F STR I T  VT    + S++HTC       K EFPLP VASVPYQPIN + Y
Sbjct: 3   MALSSLFGSTRFIPTPFVTSTRNIPSSAHTCA---SNNKREFPLPPVASVPYQPINNFAY 59

Query: 56  LQEEFNG-LGVTFEEAGGDSCMAKMELKNGSTATLLLPSGLITSYKAPMWHGGKVELLHT 114
           LQEEF+G  GVTFE    DSC+AKMELKNGS  T+++PSGLITS + P            
Sbjct: 60  LQEEFSGHAGVTFEGVE-DSCVAKMELKNGSIVTMMMPSGLITSSRPP------------ 106

Query: 115 AVSEGEYGHAIIQGGVSLNFNFQTIHDDDGESWSPTNWVLHNIKGNAEESIQVELINRAA 174
               GEYG AIIQGGVSLNFNFQT HDD   SWSPTNW+LH I+GNA E IQVEL NR +
Sbjct: 107 -CGMGEYGDAIIQGGVSLNFNFQT-HDDGEFSWSPTNWLLHKIQGNANEYIQVELTNRTS 164

Query: 175 EDKIGLKYIVTLEEDVLSSELEISNPKSLPLQMIGSILSHLTVSTPEATYAIGLERSNYC 234
           +DKIGLKYIVTLE+D L+SELEISN KSLP+QM GSIL+HLTVS+PEATYA+GLERSNYC
Sbjct: 165 DDKIGLKYIVTLEQDALNSELEISNKKSLPVQMTGSILNHLTVSSPEATYALGLERSNYC 224

Query: 235 IKPPFESGFVLSPPDSGQEEGDGKIWNSSPLKQLFPRWGANSQN 278
            KP FES F+LSPPDS QEEG GKI     L+Q FP WG   QN
Sbjct: 225 SKPLFESEFMLSPPDSCQEEGFGKI-----LQQFFPHWGTKGQN 263


>Glyma16g04600.1 
          Length = 359

 Score =  118 bits (295), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 150/334 (44%), Gaps = 15/334 (4%)

Query: 56  LQEEFNGLGVTFEEAGGDSCMAKMELKNGSTATLLLPSGLITSYKAPM-WHG-GKVELLH 113
           L E+F   G+ F E+  ++ +  + ++NGS+  L +P   +TSYK  + W   G  E+L+
Sbjct: 37  LNEKFGRKGIKFLESD-NTPIVDLTVRNGSSLRLRIPDAHVTSYKPKVNWKDDGFQEVLY 95

Query: 114 TAVSEGEYGHAIIQGGVSLNFNFQTIHDDDGESWSPTNWVLHNIKGNAEESIQVELINRA 173
           T +   E G    +GGV L  N        G   S   W ++++  ++ +++QVEL    
Sbjct: 96  T-IPATETGPYKAKGGVGLVMNEVLQPGAKGLLPSTLEWTVNDVDSDSIDALQVEL--SC 152

Query: 174 AEDKIGLKYIVTLEEDVLSSELEISNPKSLPLQMIGSILSHLTVSTPEATYAIGLERSNY 233
                 + YIVTL    +++ +   N    P  +  +ILSH        T   GL   +Y
Sbjct: 153 TSRFFDITYIVTLYPVSMATAVVAKNIGPKPATLTNAILSHFRFKNRRGTAIKGLRSCSY 212

Query: 234 CIKPPFESGF-VLSPPDSGQEEGDGKIWNSSPLKQLFPRWGANSQNXXXXXXXXXXXXXX 292
               P  S F +L+P ++   E    +   +  +     WG  + +              
Sbjct: 213 IPHAPLSSPFQILTPSEATISEPPRWLSFGNETEAKPGTWGQQALSITLLENKMSRVYAA 272

Query: 293 XXXXXXYKQLRDKLSLVYTNAPRSFTVIDRGRRNSVVIGRNGFEETYLYSPGSRVESYSK 352
                     +++L   Y   P  +  ID+GR     + R GFE+ YL SPGS  E Y K
Sbjct: 273 PP--------KERLKAFYNTPPSKYETIDQGRGLCFRVIRMGFEDIYLSSPGSLSEKYGK 324

Query: 353 DAYICVGQAAVLQPIVLGPEEVWKGGQYLQNPNL 386
           D +IC G A++L P+ + P E W+G Q +++ NL
Sbjct: 325 DYFICTGPASILVPVTVNPGEEWRGAQVIEHDNL 358


>Glyma19g28700.1 
          Length = 357

 Score =  112 bits (279), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 150/334 (44%), Gaps = 15/334 (4%)

Query: 56  LQEEFNGLGVTFEEAGGDSCMAKMELKNGSTATLLLPSGLITSYKAPM-WHG-GKVELLH 113
           L E+F   G+ F E+  +  + ++ ++NGS+  L +P   +TSYK  + W   G  E+L+
Sbjct: 35  LNEKFGRKGIKFLESD-NIPIVELTVRNGSSLRLRIPDAHVTSYKPKVNWKDDGFQEVLY 93

Query: 114 TAVSEGEYGHAIIQGGVSLNFNFQTIHDDDGESWSPTNWVLHNIKGNAEESIQVELINRA 173
           T +   E G    +GGV L  N        G   S   W ++++  ++ +++Q+EL    
Sbjct: 94  T-IPATETGPYKAKGGVGLVMNELLQPGAKGLLPSTLEWTVNDVDSDSIDALQLEL--SC 150

Query: 174 AEDKIGLKYIVTLEEDVLSSELEISNPKSLPLQMIGSILSHLTVSTPEATYAIGLERSNY 233
                 + YIVTL    +++ +   N    P  +  +ILSH        T   GL   +Y
Sbjct: 151 TSRFFDITYIVTLYPVSMATAVVAKNIGPKPATLTNAILSHFRFKKRGETAIQGLRSCSY 210

Query: 234 CIKPPFESGF-VLSPPDSGQEEGDGKIWNSSPLKQLFPRWGANSQNXXXXXXXXXXXXXX 292
               P  S F +L+P ++   E    +   +  +     WG  + +              
Sbjct: 211 IPHAPPSSPFQILTPSEATISEPPRWLSFGNEPEAKPGTWGQQALSITLLENKMSRVYAA 270

Query: 293 XXXXXXYKQLRDKLSLVYTNAPRSFTVIDRGRRNSVVIGRNGFEETYLYSPGSRVESYSK 352
                     +++L   Y   P  +  ID+GR     + R GFE+ YL SPGS  E Y K
Sbjct: 271 PP--------KERLKAFYNTPPSKYETIDQGRGLCFRVIRMGFEDIYLSSPGSLSEKYGK 322

Query: 353 DAYICVGQAAVLQPIVLGPEEVWKGGQYLQNPNL 386
           D +IC G A++L P+ + P E W+G Q +++ NL
Sbjct: 323 DYFICTGPASILVPVTVNPGEEWRGAQVIEHDNL 356


>Glyma19g09050.1 
          Length = 318

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 7/86 (8%)

Query: 305 KLSLVYTNAPRSFTVIDRGRRNSVVIGRNGFEETYLYSPGSRVESYSKDA-------YIC 357
           ++  +Y   P    VID  ++ + V+ +N   +  +++PG R      D         IC
Sbjct: 213 QMDRLYLRTPTKIAVIDHEKKRTFVLQKNAMPDAVIWNPGYRKAKALPDLGDADYKFMIC 272

Query: 358 VGQAAVLQPIVLGPEEVWKGGQYLQN 383
           V  AA+  P++L P E WKG Q L N
Sbjct: 273 VDSAAIETPLMLKPYEEWKGYQELSN 298