Miyakogusa Predicted Gene

Lj0g3v0026819.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0026819.1 tr|D7LPX2|D7LPX2_ARALL Calcium ion binding
protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT,39.52,9e-18,Oxygen-evolving enhancer protein
3,,PsbQ-like domain; PsbQ,Photosystem II PsbQ, oxygen evolving
comp,NODE_59878_length_1545_cov_30.031715.path2.1
         (182 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g31950.2                                                       260   7e-70
Glyma18g05320.1                                                       257   5e-69
Glyma11g31950.1                                                       210   6e-55
Glyma07g14340.2                                                        70   9e-13
Glyma07g14340.1                                                        70   9e-13
Glyma03g26740.1                                                        70   2e-12
Glyma12g34320.1                                                        51   8e-07
Glyma13g36240.1                                                        50   1e-06

>Glyma11g31950.2 
          Length = 189

 Score =  260 bits (664), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 133/187 (71%), Positives = 151/187 (80%), Gaps = 7/187 (3%)

Query: 1   MVLRSFILQPNLTHLLPTCKFCVK--PSFQH----SQQKEFSLKI-SRRVGVLAAMASLI 53
           M LRS ILQPNLTHL PT   CVK  PSFQH    S  KE SLKI SRRVGVLAA+ SLI
Sbjct: 1   MELRSLILQPNLTHLFPTFTCCVKLKPSFQHLQNNSNNKELSLKIRSRRVGVLAAITSLI 60

Query: 54  LGGEGIFSSQSAYASEFAFMAPDLTVEEAQNGAKVHAQDLLQVRELLGAESWKAAQRALR 113
           LGG GIF +QSA A EF F+APD+TVEEA +G + HAQDLL VR+LL  ESW+AAQ+ LR
Sbjct: 61  LGGNGIFRTQSANAFEFKFVAPDMTVEEALSGVRGHAQDLLHVRDLLELESWRAAQKTLR 120

Query: 114 QSSALLRKDLYAIIQSKPGSERPQLRNLFSILFNNVSRLDYAARDKDVPEIWRRYENIVV 173
           QSSA+L+KD+Y IIQSKPG ER QLR L+S LFNNV+RLDYAARDKD P++W+ Y+NIVV
Sbjct: 121 QSSAILKKDIYIIIQSKPGIERAQLRKLYSTLFNNVTRLDYAARDKDGPQVWQCYKNIVV 180

Query: 174 AVNDILS 180
           AVNDILS
Sbjct: 181 AVNDILS 187


>Glyma18g05320.1 
          Length = 200

 Score =  257 bits (657), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 130/183 (71%), Positives = 148/183 (80%), Gaps = 3/183 (1%)

Query: 1   MVLRSFILQPNLTHLLPTCKFCVK--PSFQHSQQ-KEFSLKISRRVGVLAAMASLILGGE 57
           M L S ILQPNLTHL PT   CVK  PSFQH Q  KE SLKISRRVGVLAA+ SLILG  
Sbjct: 15  MELTSLILQPNLTHLFPTFTCCVKLKPSFQHLQNNKELSLKISRRVGVLAAITSLILGVN 74

Query: 58  GIFSSQSAYASEFAFMAPDLTVEEAQNGAKVHAQDLLQVRELLGAESWKAAQRALRQSSA 117
           G F +QSA A EF F+APD+TVE+A +G + HAQDLL VR+LL  ESW+AAQ+ LRQSSA
Sbjct: 75  GNFGTQSANAFEFKFVAPDMTVEDALSGVRGHAQDLLHVRDLLELESWRAAQKTLRQSSA 134

Query: 118 LLRKDLYAIIQSKPGSERPQLRNLFSILFNNVSRLDYAARDKDVPEIWRRYENIVVAVND 177
           +L+KD+Y IIQSKPG ER QLR L+S LFNNV+RLDYAARDKD P++W+ YENIVVAVND
Sbjct: 135 ILKKDIYTIIQSKPGIERAQLRKLYSTLFNNVTRLDYAARDKDGPQVWQCYENIVVAVND 194

Query: 178 ILS 180
           ILS
Sbjct: 195 ILS 197


>Glyma11g31950.1 
          Length = 202

 Score =  210 bits (535), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 110/159 (69%), Positives = 125/159 (78%), Gaps = 7/159 (4%)

Query: 1   MVLRSFILQPNLTHLLPTCKFCVK--PSFQH----SQQKEFSLKI-SRRVGVLAAMASLI 53
           M LRS ILQPNLTHL PT   CVK  PSFQH    S  KE SLKI SRRVGVLAA+ SLI
Sbjct: 1   MELRSLILQPNLTHLFPTFTCCVKLKPSFQHLQNNSNNKELSLKIRSRRVGVLAAITSLI 60

Query: 54  LGGEGIFSSQSAYASEFAFMAPDLTVEEAQNGAKVHAQDLLQVRELLGAESWKAAQRALR 113
           LGG GIF +QSA A EF F+APD+TVEEA +G + HAQDLL VR+LL  ESW+AAQ+ LR
Sbjct: 61  LGGNGIFRTQSANAFEFKFVAPDMTVEEALSGVRGHAQDLLHVRDLLELESWRAAQKTLR 120

Query: 114 QSSALLRKDLYAIIQSKPGSERPQLRNLFSILFNNVSRL 152
           QSSA+L+KD+Y IIQSKPG ER QLR L+S LFNNV+R+
Sbjct: 121 QSSAILKKDIYIIIQSKPGIERAQLRKLYSTLFNNVTRI 159


>Glyma07g14340.2 
          Length = 234

 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 72  FMAPDLTVEEAQNGAKVHAQDLLQVRELLGAESWKAAQRALRQSSALLRKDLYAIIQSKP 131
           F+ P L+  EA   AK  A++++ V++L+  ++W   Q  LR  +  LR DL  +I  KP
Sbjct: 124 FLQP-LSPTEAAQRAKESAKEIVGVKKLIEKKAWPYVQNDLRLRAEYLRFDLNTVIAGKP 182

Query: 132 GSERPQLRNLFSILFNNVSRLDYAARDKDVPEIWRRYENIVVAVNDILSIL 182
             E+  L+ L   LF ++S LD+AA+ K  PE  + Y   V ++ND+L+ L
Sbjct: 183 KDEKKSLKELTGKLFQDISNLDHAAKIKSSPEAEKYYAATVSSLNDVLAKL 233


>Glyma07g14340.1 
          Length = 236

 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 72  FMAPDLTVEEAQNGAKVHAQDLLQVRELLGAESWKAAQRALRQSSALLRKDLYAIIQSKP 131
           F+ P L+  EA   AK  A++++ V++L+  ++W   Q  LR  +  LR DL  +I  KP
Sbjct: 126 FLQP-LSPTEAAQRAKESAKEIVGVKKLIEKKAWPYVQNDLRLRAEYLRFDLNTVIAGKP 184

Query: 132 GSERPQLRNLFSILFNNVSRLDYAARDKDVPEIWRRYENIVVAVNDILSIL 182
             E+  L+ L   LF ++S LD+AA+ K  PE  + Y   V ++ND+L+ L
Sbjct: 185 KDEKKSLKELTGKLFQDISNLDHAAKIKSSPEAEKYYAATVSSLNDVLAKL 235


>Glyma03g26740.1 
          Length = 232

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 65/111 (58%), Gaps = 1/111 (0%)

Query: 72  FMAPDLTVEEAQNGAKVHAQDLLQVRELLGAESWKAAQRALRQSSALLRKDLYAIIQSKP 131
           F+ P L+  +A   AK  A++++ V++L+  ++W   Q  LR  +  LR DL  +I +KP
Sbjct: 122 FLQP-LSPTDAAQRAKESAKEIVGVKKLIEKKAWPYVQNDLRLRAEYLRFDLNTVIAAKP 180

Query: 132 GSERPQLRNLFSILFNNVSRLDYAARDKDVPEIWRRYENIVVAVNDILSIL 182
             E+  L+ L   LF ++S LD+AA+ K  PE  + Y   V ++ND+L+ L
Sbjct: 181 KDEKKSLKELTGKLFQDISNLDHAAKIKSSPEAEKYYAATVSSLNDVLAKL 231


>Glyma12g34320.1 
          Length = 250

 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 51/93 (54%)

Query: 87  KVHAQDLLQVRELLGAESWKAAQRALRQSSALLRKDLYAIIQSKPGSERPQLRNLFSILF 146
           K +A DLL + +L+  ++    ++ LR  S  +  D   +I + P  ++ QL ++ + LF
Sbjct: 148 KKYAFDLLAMADLIAEDTLNYVRKYLRLKSTFMYYDFDKVISAIPVDDKQQLTDMANKLF 207

Query: 147 NNVSRLDYAARDKDVPEIWRRYENIVVAVNDIL 179
           +N  RL+ A+R K +PE    Y+   V + +++
Sbjct: 208 DNFERLEEASRKKSLPETKSCYQETEVMLKEVM 240


>Glyma13g36240.1 
          Length = 233

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 51/94 (54%)

Query: 87  KVHAQDLLQVRELLGAESWKAAQRALRQSSALLRKDLYAIIQSKPGSERPQLRNLFSILF 146
           K +A DLL + +L+  ++    ++ LR  S  +  D   II + P  ++ QL ++ + LF
Sbjct: 131 KKYAFDLLAMADLIAEDTLNYVRKYLRLKSTFMYYDFDKIIPAIPVDDKQQLTDMANKLF 190

Query: 147 NNVSRLDYAARDKDVPEIWRRYENIVVAVNDILS 180
           +N  RL+ A+R K +PE    Y+   V + +++ 
Sbjct: 191 DNFERLEEASRKKSLPETKSCYQETEVMLKEVMD 224