Miyakogusa Predicted Gene

Lj0g3v0024609.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0024609.1 tr|G7JU86|G7JU86_MEDTR Cytosine-specific
methyltransferase OS=Medicago truncatula GN=MTR_4g113420
PE,32.82,2e-17,CHROMO_2,Chromo domain/shadow; BAH,Bromo adjacent
homology (BAH) domain; Chromo domain-like,Chromo d,CUFF.1384.1
         (692 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g17720.1                                                       325   8e-89
Glyma01g36500.1                                                       305   1e-82
Glyma01g36500.2                                                       298   9e-81
Glyma01g01120.1                                                       273   5e-73
Glyma09g26010.1                                                        96   1e-19
Glyma11g30960.1                                                        83   9e-16

>Glyma16g17720.1 
          Length = 735

 Score =  325 bits (834), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 178/320 (55%), Positives = 208/320 (65%), Gaps = 67/320 (20%)

Query: 408 MNDNLIECILAKVNVTHIKPRVNMNLTSNSPS----DFYYDMEY---------------- 447
           MNDNLI+CI+ K NVTHI PRV + L S S S    D  Y ++Y                
Sbjct: 1   MNDNLIDCIMGKANVTHITPRVGLKLASISSSDFYYDMEYCVDYSTFRNIPTGPNPSESL 60

Query: 448 -----------------CVDY----------STFRNIPT-------DNPANITELSAPAT 473
                            C++            +F+ I         +NP    ELS P+ 
Sbjct: 61  LVVCKCDFICSYAINVSCLELFQRCSSNICSVSFKIISIKCQYTALNNPVKTNELSPPSV 120

Query: 474 HESLSTEASSITKSPPSSELHKTELELLDLYSGCGGMSTGLCFGAKTSSVNLVARWAVDS 533
            ESLST+AS+            TEL LLDLYSGCGGMSTGLC GAKT+SVNLV RWAVDS
Sbjct: 121 LESLSTDAST------------TELALLDLYSGCGGMSTGLCLGAKTASVNLVTRWAVDS 168

Query: 534 DRSASESLRLNHSATYVRNESAEDFLELVKEWEKLCKRYNVSGAQRKLPSRSNSSAEKKQ 593
           DRSA ESL+LNHS T+VRNESAEDFLEL+K WEKLCKRYNVS  +RKLP RSNSS  KK+
Sbjct: 169 DRSAGESLKLNHSDTHVRNESAEDFLELLKAWEKLCKRYNVSSTERKLPFRSNSSGAKKR 228

Query: 594 VNSQAHDTASDDEIEVSRLVDICYSDPNETGKRGLYFKVRWKGHGASEDSWEPIENLRKC 653
            NS+ H+  SD E+EVS+LVDIC+ DPNETGKRGLY KV WKG+ ASED+WEPI++L KC
Sbjct: 229 GNSEVHEI-SDGELEVSKLVDICFGDPNETGKRGLYLKVHWKGYSASEDTWEPIKSLSKC 287

Query: 654 KESIQDFVRKGVKSKILPRP 673
           KES+QDFVRKG+KS ILP P
Sbjct: 288 KESMQDFVRKGMKSNILPLP 307


>Glyma01g36500.1 
          Length = 833

 Score =  305 bits (781), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 159/399 (39%), Positives = 233/399 (58%), Gaps = 9/399 (2%)

Query: 284 SSFFGDPIPDDEAQKRWGWRYELKDKKCKNQQFXXXXXXXXXXXXXXXCHYAQANIGNCI 343
           + F G PIP  EA+ +W  RY  + KK    +                CHY QA +   +
Sbjct: 38  ACFVGKPIPSAEARAKWPHRYPSEVKKKAPARSSEEVTSENSEVMLARCHYRQAKVDGVV 97

Query: 344 FTLGDCAFIEGEDGQK-HVGKIVEFFQTTDSQNYFRVQWFYRIQDTVIQDEGDFHDKRRL 402
           + L D A+++ EDG+  ++ +IVE F+T D +  F  QWFYR +DTVI++ GD  DK+R+
Sbjct: 98  YNLYDDAYVKAEDGKPDYIARIVEMFETVDKEQCFMAQWFYRAEDTVIKNHGDLVDKKRV 157

Query: 403 FYSSIMNDNLIECILAKVNVTHIKPRVNM-NLTSNSP-SDFYYDMEYCVDYSTFRN---- 456
           F S + + N ++CI++KV +    P V++ +  +  P  D+YYDM+Y V Y TF N    
Sbjct: 158 FISDVKDVNPLDCIVSKVKIFKKNPSVDLASKKAKLPFCDYYYDMKYTVPYLTFSNLVNE 217

Query: 457 -IPTDNPANITELSAPATHESLSTEASSITKSPPSSELHKTELELLDLYSGCGGMSTGLC 515
            + T++ A+ T  S   +   ++    +  K+  ++    ++  LLDLYSGCG MSTGLC
Sbjct: 218 TVKTESDASSTISSESGSIGCVNNANLAKRKTTQNNSSGSSQWTLLDLYSGCGAMSTGLC 277

Query: 516 FGAKTSSVNLVARWAVDSDRSASESLRLNHSATYVRNESAEDFLELVKEWEKLCKRYNVS 575
            GA  + + LV  WAVD +  A +SL+LNH  T+VRNE AEDFL L+K W KLC+ + + 
Sbjct: 278 LGASLAGIKLVTMWAVDINAHACKSLKLNHPETHVRNEPAEDFLNLIKAWAKLCEEFALL 337

Query: 576 GAQRKLPSRSNSSAEKKQVNSQAHDTASD-DEIEVSRLVDICYSDPNETGKRGLYFKVRW 634
           G++R          E + V  +     SD +E EV +L+ +CY DPN   K GLYFKVRW
Sbjct: 338 GSERSDSDPDMDEDENEAVQKEESGNQSDLEEFEVEKLLAVCYGDPNGVKKPGLYFKVRW 397

Query: 635 KGHGASEDSWEPIENLRKCKESIQDFVRKGVKSKILPRP 673
            G+ +S D+WEPI+ L  CKE ++DFV KG K ++LP P
Sbjct: 398 LGYDSSYDTWEPIDGLSDCKEVMKDFVTKGYKKRLLPLP 436


>Glyma01g36500.2 
          Length = 594

 Score =  298 bits (764), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 157/405 (38%), Positives = 231/405 (57%), Gaps = 15/405 (3%)

Query: 284 SSFFGDPIPDDEAQKRWGWRYELKDKKCKNQQFXXXXXXXXXXXXXXXCHYAQANIGNCI 343
           + F G PIP  EA+ +W  RY  + KK    +                CHY QA +   +
Sbjct: 38  ACFVGKPIPSAEARAKWPHRYPSEVKKKAPARSSEEVTSENSEVMLARCHYRQAKVDGVV 97

Query: 344 FTLGDCAFIEGEDGQ-KHVGKIVEFFQTTDSQNYFRVQWFYRIQDTVIQDEGDFHDKRRL 402
           + L D A+++ EDG+  ++ +IVE F+T D +  F  QWFYR +DTVI++ GD  DK+R+
Sbjct: 98  YNLYDDAYVKAEDGKPDYIARIVEMFETVDKEQCFMAQWFYRAEDTVIKNHGDLVDKKRV 157

Query: 403 FYSSIMNDNLIECILAKVNVTHIKPRVNMNLTSNSPS--------DFYYDMEYCVDYSTF 454
           F S + + N ++CI++K  ++   P + + +     S        D+YYDM+Y V Y TF
Sbjct: 158 FISDVKDVNPLDCIVSKDYLSFWNPYIYICVCVYLASKKAKLPFCDYYYDMKYTVPYLTF 217

Query: 455 RN-----IPTDNPANITELSAPATHESLSTEASSITKSPPSSELHKTELELLDLYSGCGG 509
            N     + T++ A+ T  S   +   ++    +  K+  ++    ++  LLDLYSGCG 
Sbjct: 218 SNLVNETVKTESDASSTISSESGSIGCVNNANLAKRKTTQNNSSGSSQWTLLDLYSGCGA 277

Query: 510 MSTGLCFGAKTSSVNLVARWAVDSDRSASESLRLNHSATYVRNESAEDFLELVKEWEKLC 569
           MSTGLC GA  + + LV  WAVD +  A +SL+LNH  T+VRNE AEDFL L+K W KLC
Sbjct: 278 MSTGLCLGASLAGIKLVTMWAVDINAHACKSLKLNHPETHVRNEPAEDFLNLIKAWAKLC 337

Query: 570 KRYNVSGAQRKLPSRSNSSAEKKQVNSQAHDTASD-DEIEVSRLVDICYSDPNETGKRGL 628
           + + + G++R          E + V  +     SD +E EV +L+ +CY DPN   K GL
Sbjct: 338 EEFALLGSERSDSDPDMDEDENEAVQKEESGNQSDLEEFEVEKLLAVCYGDPNGVKKPGL 397

Query: 629 YFKVRWKGHGASEDSWEPIENLRKCKESIQDFVRKGVKSKILPRP 673
           YFKVRW G+ +S D+WEPI+ L  CKE ++DFV KG K ++LP P
Sbjct: 398 YFKVRWLGYDSSYDTWEPIDGLSDCKEVMKDFVTKGYKKRLLPLP 442


>Glyma01g01120.1 
          Length = 744

 Score =  273 bits (698), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 142/349 (40%), Positives = 219/349 (62%), Gaps = 20/349 (5%)

Query: 343 IFTLGDCAFIEGEDGQ-KHVGKIVEFFQTTDSQNYFRVQWFYRIQDTVIQDEGDFHDKRR 401
           ++ L D A ++ E+G+  ++ KIVE F+  D   YF  QW+YR +DTVI+      + +R
Sbjct: 2   LYKLYDDAHVKAEEGEDNYICKIVEIFEAIDGALYFTAQWYYRAKDTVIKKLAYLIEPKR 61

Query: 402 LFYSSIMNDNLIECILAKVNVTHIKPRVNMNLTSNS--PSDFYYDMEYCVDYSTFRNIPT 459
           +F+S + +DN ++C++ K+N+  I   V++     +  P D+Y D +Y + YSTF N+P+
Sbjct: 62  VFFSEVQDDNPLDCLVEKLNIARITLNVDLEAKKETIPPCDYYCDTQYLLPYSTFVNLPS 121

Query: 460 DNPANITELSAPATHESLSTEASSITKSPPSSELHK----TELELLDLYSGCGGMSTGLC 515
           +N  + +E S+  + E+       +   P  + L +     E++LLDLY GCG MSTGLC
Sbjct: 122 ENGESGSETSSTISSETNGIGKYEVNSQPKEAFLPEESKDPEMKLLDLYCGCGAMSTGLC 181

Query: 516 FGAKTSSVNLVARWAVDSDRSASESLRLNHSATYVRNESAEDFLELVKEWEKLCKRYNVS 575
            G   S VNLV RWAVD ++ A E L+LNH  T VRNESAE+FL L+KEW++LC  +++ 
Sbjct: 182 LGGNLSGVNLVTRWAVDLNQHACECLKLNHPETEVRNESAENFLSLLKEWQELCSYFSL- 240

Query: 576 GAQRKLPSR---------SNSSAEKKQVNSQ-AHDTASDDEI-EVSRLVDICYSDPNETG 624
             ++K+             + ++  ++VNS+  ++   DDEI EVS ++ +CY DPN+  
Sbjct: 241 -VEKKVSHEKYVNLFSEDDDDTSSNEEVNSEDDNELNEDDEIFEVSEILAVCYGDPNKKK 299

Query: 625 KRGLYFKVRWKGHGASEDSWEPIENLRKCKESIQDFVRKGVKSKILPRP 673
           ++GLYFKV WKG+ ++ DSWEPIE L  CKE I++FV +G KS+ILP P
Sbjct: 300 EQGLYFKVHWKGYESALDSWEPIEGLSNCKEKIKEFVSRGFKSQILPLP 348


>Glyma09g26010.1 
          Length = 165

 Score = 95.9 bits (237), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 56/138 (40%), Positives = 81/138 (58%), Gaps = 10/138 (7%)

Query: 497 ELELLDLYSGCGGMSTGLCFGAKTSSVNLVARWAVDSDRSASESLRLNHSATYVRNESAE 556
           E++LLDLY GC  MSTGLC G   S +NLV RW VD ++ A E L+LNH  T    E   
Sbjct: 23  EMKLLDLYCGCRAMSTGLCLGGNLSGMNLVTRWVVDLNKHACECLKLNHPDT----EVIP 78

Query: 557 DFLELVKEWEKLCKRYNVSGAQRKLPSRSNSSAEKKQVNSQ-AHDTASDDEI-EVSRLVD 614
            F  ++K  +K+     V+          + ++  ++VNS+  ++   DDEI EVS ++ 
Sbjct: 79  CFYVVIKLKKKVSHEKYVN----LFSEEDDDTSSNEEVNSEDDNELNEDDEIFEVSEILV 134

Query: 615 ICYSDPNETGKRGLYFKV 632
           +CY DPN+  ++GLYFKV
Sbjct: 135 VCYGDPNKKKEQGLYFKV 152


>Glyma11g30960.1 
          Length = 221

 Score = 83.2 bits (204), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 52/193 (26%)

Query: 498 LELLDLYSGCGGMSTGLCFGAKTSSVNLVAR------------------------W--AV 531
           ++LLDLY GC  MSTGLC G   S V L+ R                        W  ++
Sbjct: 36  MKLLDLYCGCRAMSTGLCLGGNLSGVTLLLRENFIEINSLLLSESSSNKSSFKSVWFNSL 95

Query: 532 DSDRSASESLRLNHSAT--YVRNESAEDFLELVKEWEKLCKRYNVSGAQRKLPSR----- 584
           D      +    +HS T  ++ N          KEW++LC  +++   ++K+        
Sbjct: 96  DVFLFLEDPFAADHSRTRWFLINSH--------KEWQELCSYFSL--VEKKVSHEKYVNL 145

Query: 585 ----SNSSAEKKQVNSQA-HDTASDDEI-EVSRLVDICYSDPNETGKR---GLYFKVRWK 635
                N +   ++VNS+  ++   DDE+ +VS ++ + Y DPN   K+   GLYFKV WK
Sbjct: 146 FSEDDNDTGSNEEVNSEDDNELNEDDEVFKVSEILVVIYGDPNIYKKKKEQGLYFKVHWK 205

Query: 636 GHGASEDSWEPIE 648
            +G++ DSWEPIE
Sbjct: 206 SYGSALDSWEPIE 218