Miyakogusa Predicted Gene

Lj0g3v0024529.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0024529.1 tr|B9MUB0|B9MUB0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_917368 PE=4
SV=1,70.49,0,seg,NULL; PRLI-INTERACTING FACTOR L,NULL;
COBW-RELATED,NULL; Cobalamin synthesis protein cobW C-term,CUFF.1380.1
         (424 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g17700.1                                                       447   e-125
Glyma10g43740.1                                                       336   2e-92
Glyma20g38450.1                                                       332   3e-91
Glyma01g07010.1                                                       222   7e-58
Glyma16g17690.1                                                       167   2e-41
Glyma02g12890.1                                                       144   2e-34
Glyma08g45390.1                                                       116   4e-26

>Glyma16g17700.1 
          Length = 274

 Score =  447 bits (1149), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 230/276 (83%), Positives = 237/276 (85%), Gaps = 2/276 (0%)

Query: 1   MATTYMALRTTAKTLLGVAHSPVPHSCHPLSLIRTLHSFVSRHPSFHHPYSGTFSFFFRG 60
           MAT YM LRT+AKTL      PV  S     LIRTLHSFV+R        +  FS  FRG
Sbjct: 1   MATRYMTLRTSAKTLFHHLQPPVQDSRCAFHLIRTLHSFVARDSDPRKFRNSFFSGTFRG 60

Query: 61  MASASAPNHNLDEAASLAPDNRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENEFG 120
           M SA  PN N DEAASLA DNRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENEFG
Sbjct: 61  MVSA--PNPNFDEAASLALDNRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENEFG 118

Query: 121 EVDIDGSLVASHSSVSEDIIMVNNGCLCCTVRGDLVKMLLELARKKRDVIDHIVIETTGL 180
           EVDIDGSLVASHSS SE+IIMVNNGCLCCTVRGDLVKMLLEL RKKRD  DHIVIETTGL
Sbjct: 119 EVDIDGSLVASHSSASEEIIMVNNGCLCCTVRGDLVKMLLELVRKKRDKFDHIVIETTGL 178

Query: 181 AKPGPVIETFCSDELVSQYVKLDGVVTLVDCKHAMQHLNEVKPRFVVNEAVEQVAYADRI 240
           AKP PVIETFCSDELVSQ+VKLDGVVTLVDCKHAM+HLNEVKPRFVVNEAVEQVAYADRI
Sbjct: 179 AKPAPVIETFCSDELVSQHVKLDGVVTLVDCKHAMKHLNEVKPRFVVNEAVEQVAYADRI 238

Query: 241 ILNKIDLVSESELNALTKKIKHINGMAQIKQAKFGS 276
           ILNKIDLV+ESELN LTKKIKHINGMAQIKQAKFGS
Sbjct: 239 ILNKIDLVTESELNILTKKIKHINGMAQIKQAKFGS 274


>Glyma10g43740.1 
          Length = 446

 Score =  336 bits (862), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 167/294 (56%), Positives = 222/294 (75%), Gaps = 8/294 (2%)

Query: 12  AKTLLGVA-HSPVPHSCHPLSLIRTLHSFVSRHP----SFHHPYSGTFSFFFRGMASASA 66
           A + LG+A H+P P +   LSL  TL   + R      S   P   +  FF     +A  
Sbjct: 11  ASSFLGLAYHNPKPFT---LSLQTTLLPLLRRTTTHSRSLTFPLRPSRRFFVTSATTAPP 67

Query: 67  PNHNLDEAASLAPDNRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDG 126
            + + D +  + PDNR+PAT+ITGFLGSGKTTLLNHILT++HGK+IAVIENEFGE+DIDG
Sbjct: 68  QSEDSDVSTVIPPDNRIPATIITGFLGSGKTTLLNHILTAEHGKKIAVIENEFGEIDIDG 127

Query: 127 SLVASHSSVSEDIIMVNNGCLCCTVRGDLVKMLLELARKKRDVIDHIVIETTGLAKPGPV 186
           SLVA+ ++ +EDI+M+NNGCLCCTVRGDLV+M+ EL  KK+   DHIVIETTGLA P P+
Sbjct: 128 SLVAAKTAGAEDIMMLNNGCLCCTVRGDLVRMISELVAKKKGKFDHIVIETTGLANPAPI 187

Query: 187 IETFCSDELVSQYVKLDGVVTLVDCKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKID 246
           I+TF ++E +   VKLDGVVTLVD KHA  HL+EVKP+ VVNEAVEQ+AYADRII+NK D
Sbjct: 188 IQTFYAEENIFNDVKLDGVVTLVDAKHAGFHLDEVKPKGVVNEAVEQIAYADRIIVNKTD 247

Query: 247 LVSESELNALTKKIKHINGMAQIKQAKFGSVDIDFVLGVGGYDLQRIESDVHGE 300
           LV ES++ +L ++I+ IN +A +K+ ++G V++D+VLG+GG+DL+RIE+ ++ E
Sbjct: 248 LVGESDIASLVQRIRKINSLANLKRTEYGKVNLDYVLGIGGFDLERIENAINDE 301



 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 47/88 (53%), Positives = 66/88 (75%)

Query: 337 EGTLDLDEVDDWLERLVEEKGEDLYRMKGVLSVDGSDQRYVLQGVHSILDGSKGKEWEPE 396
           EG+LDL++ + WL  L+ ++ ED+YRMKG+LSV G ++R+V QGVH I  GS  + W P+
Sbjct: 359 EGSLDLEKANMWLGTLLLDRSEDIYRMKGLLSVQGMNERFVFQGVHDIFQGSPERLWGPD 418

Query: 397 EKRINKLVFIGRNLDETTLRKGFRGCLV 424
           E R+NK+VFIG+NLD   L KGF+ CL+
Sbjct: 419 EPRVNKIVFIGKNLDAKELEKGFKACLL 446


>Glyma20g38450.1 
          Length = 445

 Score =  332 bits (852), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 166/277 (59%), Positives = 215/277 (77%), Gaps = 6/277 (2%)

Query: 30  LSLIRTLHSFVSRHPSFHHPYSGTF----SFFFRGMASASAPNHNLDEAAS--LAPDNRV 83
           LSL  TL   + R  +  H  S TF    S  F   A+ +AP  + D   S  + PDNR+
Sbjct: 24  LSLQTTLLPLLRRTTTHSHSQSLTFPLRPSRRFSVPATTTAPPQSEDSDVSTLIPPDNRI 83

Query: 84  PATVITGFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDGSLVASHSSVSEDIIMVN 143
           PAT+ITGFLGSGKTTLLNHILT++HGKRIAVIENEFGE+DIDGSLVA+ ++ +EDI+M+N
Sbjct: 84  PATIITGFLGSGKTTLLNHILTAEHGKRIAVIENEFGEIDIDGSLVAAKAAGAEDIMMLN 143

Query: 144 NGCLCCTVRGDLVKMLLELARKKRDVIDHIVIETTGLAKPGPVIETFCSDELVSQYVKLD 203
           NGCLCCTVRGDLV+M+ EL  KK+   DHIVIETTGLA P P+I+TF ++E +   VKLD
Sbjct: 144 NGCLCCTVRGDLVRMISELVAKKKGKFDHIVIETTGLANPAPIIQTFYAEENIFNEVKLD 203

Query: 204 GVVTLVDCKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVSESELNALTKKIKHI 263
           GVVTLVD KHA  HL+EVKP+ VVNEAVEQ+AYADRII+NK DLV ES++ +L ++I+ I
Sbjct: 204 GVVTLVDAKHAGFHLDEVKPKGVVNEAVEQIAYADRIIVNKTDLVGESDIASLVQRIRKI 263

Query: 264 NGMAQIKQAKFGSVDIDFVLGVGGYDLQRIESDVHGE 300
           N +A +K+ ++G V++D+VLG+GG+DL+RIE+ ++ E
Sbjct: 264 NSLANLKRTEYGKVNLDYVLGIGGFDLERIENAINDE 300



 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 46/88 (52%), Positives = 64/88 (72%)

Query: 337 EGTLDLDEVDDWLERLVEEKGEDLYRMKGVLSVDGSDQRYVLQGVHSILDGSKGKEWEPE 396
           EG+LDL++ + WL  L+ +  ED+YRMKG+LSV G ++R+V QGVH +  GS  + W P+
Sbjct: 358 EGSLDLEKANMWLGTLLLDHSEDIYRMKGLLSVQGMNERFVFQGVHDMFQGSPERLWGPD 417

Query: 397 EKRINKLVFIGRNLDETTLRKGFRGCLV 424
           E RINK+VFIG+ LD   L KGF+ CL+
Sbjct: 418 EPRINKIVFIGKKLDAKELEKGFKACLL 445


>Glyma01g07010.1 
          Length = 365

 Score =  222 bits (565), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 139/343 (40%), Positives = 194/343 (56%), Gaps = 22/343 (6%)

Query: 86  TVITGFLGSGKTTLLNHILTSQHGKRIAVIENEFGE-VDIDGSLV--ASHSSVSEDIIMV 142
           T+ITG+LGSGK+TL+NHIL SQHGKRIAVI NEFGE + ++ +++      ++ E+ + +
Sbjct: 32  TLITGYLGSGKSTLVNHILNSQHGKRIAVILNEFGEEIGVERAMINEGDKGALVEEWVEL 91

Query: 143 NNGCLCCTVRGDLVKMLLELARKKRDVIDHIVIETTGLAKPGPVIETFCSDELVSQYVKL 202
            NGC+CCTV+  LV+ L +L ++K + +DHI++ETTGLA P P+      DE +   VKL
Sbjct: 92  ANGCICCTVKHSLVQALEQLVQRK-ERLDHILLETTGLANPAPLASVLWLDEQLESEVKL 150

Query: 203 DGVVTLVDCKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLVS-ESE--LNALTKK 259
           D +VT+VD K+    L+E +      EA  Q+A+AD IILNK+DLVS ES   L  L  +
Sbjct: 151 DSIVTVVDAKNLRFQLDEHRGSSSFPEAYFQIAFADIIILNKVDLVSVESSGALEELEVE 210

Query: 260 IKHINGMAQIKQAKFGSVDIDFVLGVGGYDLQRIESDVHGECPSSASHQXXXXXXXXXXX 319
           I +IN +A+I  +    VD+  +L    YD  R             + Q           
Sbjct: 211 IHNINSLAEIIHSVRCQVDLSKILNRQAYDTAR-------------ATQLEALLEESRSL 257

Query: 320 XXXXXXXXXXXXXXXXAEGTLDLDEVDDWLERLVEEKGEDL--YRMKGVLSVDGSDQRYV 377
                               ++LD+   WLE ++ EK  D+  YR KGVLSV  SDQ + 
Sbjct: 258 STKKLHDSDVRTICICETRMINLDKTRIWLEEILWEKKYDMDVYRCKGVLSVQNSDQLHT 317

Query: 378 LQGVHSILDGSKGKEWEPEEKRINKLVFIGRNLDETTLRKGFR 420
           LQ V  + +    ++WE EEKRINK+VFIG NL E  L   FR
Sbjct: 318 LQAVKELYEIVPSRKWEKEEKRINKIVFIGHNLKEDILINSFR 360


>Glyma16g17690.1 
          Length = 3826

 Score =  167 bits (424), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 76/89 (85%), Positives = 82/89 (92%)

Query: 336  AEGTLDLDEVDDWLERLVEEKGEDLYRMKGVLSVDGSDQRYVLQGVHSILDGSKGKEWEP 395
            AEGTLDLDEVDDWLER++EEKG+DLYRMKGVLSVD SDQRYV QGVHS+LDG  GK WEP
Sbjct: 3738 AEGTLDLDEVDDWLERVIEEKGDDLYRMKGVLSVDSSDQRYVFQGVHSMLDGCPGKTWEP 3797

Query: 396  EEKRINKLVFIGRNLDETTLRKGFRGCLV 424
             EKRINKLVFIGRNLDET L+KGF+GCLV
Sbjct: 3798 NEKRINKLVFIGRNLDETALKKGFKGCLV 3826


>Glyma02g12890.1 
          Length = 204

 Score =  144 bits (363), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 77/169 (45%), Positives = 114/169 (67%), Gaps = 4/169 (2%)

Query: 83  VPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVD-IDGSLV--ASHSSVSEDI 139
           V  T+ITG+LG+GK+TL+NHIL +Q+GKRIAVI NEFGE   ++ +++      ++ E+ 
Sbjct: 29  VGVTLITGYLGAGKSTLVNHILNTQYGKRIAVILNEFGEEKGVERAMINEGGKGALVEEW 88

Query: 140 IMVNNGCLCCTVRGDLVKMLLELARKKRDVIDHIVIETTGLAKPGPVIETFCSDELVSQY 199
           + + NGC+CCTV+  LV+ L +L ++K + +DHI++ETTGLA P P+      DE +   
Sbjct: 89  VELANGCICCTVKHSLVQALEQLVQRK-ERLDHILLETTGLANPAPLASVLWLDEQLESE 147

Query: 200 VKLDGVVTLVDCKHAMQHLNEVKPRFVVNEAVEQVAYADRIILNKIDLV 248
           V+LD +VT+VD K+    L E +      EA  Q+ +AD IILNK+DLV
Sbjct: 148 VRLDSIVTVVDAKNLRFQLEEHRGSSSFPEAYFQITFADIIILNKVDLV 196


>Glyma08g45390.1 
          Length = 195

 Score =  116 bits (291), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 57/107 (53%), Positives = 76/107 (71%), Gaps = 2/107 (1%)

Query: 58  FRGMASASAPNH--NLDEAASLAPDNRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVI 115
           F   ++ +AP    + D +  ++P+N +   +IT FL   K TLLNHILT +HGK+IA I
Sbjct: 20  FSVTSATTAPPQFEDFDVSNVISPNNCISEIIITNFLSFNKITLLNHILTVEHGKKIADI 79

Query: 116 ENEFGEVDIDGSLVASHSSVSEDIIMVNNGCLCCTVRGDLVKMLLEL 162
           ENEFGE+D+DGSLVA+ S   EDI+M+NN CLCC V GDLVKM+ +L
Sbjct: 80  ENEFGEIDLDGSLVAAKSVGVEDIMMLNNNCLCCIVNGDLVKMISKL 126