Miyakogusa Predicted Gene

Lj0g3v0024349.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0024349.1 Non Chatacterized Hit- tr|G7IGQ6|G7IGQ6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,30.6,0.000000003,DUF4283,Domain of unknown function DUF4283;
seg,NULL,CUFF.1372.1
         (428 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g06720.1                                                        55   1e-07
Glyma09g10240.1                                                        52   1e-06
Glyma13g13950.1                                                        51   2e-06

>Glyma19g06720.1 
          Length = 3023

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 63/137 (45%)

Query: 85  GTVREVYTIEVLQAFVNEFHSFVIRVKPLSAREVLLEFQSADDMRVVLQEGKEFLKQKFM 144
           G +++V  +E ++  V     + I  K LS   +LL   S +  + ++Q  K      F 
Sbjct: 462 GKLKKVMAVESIEDRVAWDLGYNICTKFLSDDMILLMGLSEEKAQHIIQTEKNNGSSLFY 521

Query: 145 VITPCTRQTRSRSSLVWLKVHRVPVYAWSYDFFDAVVCTFSRLVCLDHPTSSRARFDVAR 204
            +       R ++ +VWL+V   P+  W  D F         ++ LD  T +R R D AR
Sbjct: 522 SLERWRPGCRPQNRVVWLQVWGFPIEMWGADHFRKATALIGDVIELDDDTDNRRRLDRAR 581

Query: 205 VLVDAPEPLVAAREISI 221
           +LV  P P   ++EI++
Sbjct: 582 ILVRTPLPPSISKEINV 598


>Glyma09g10240.1 
          Length = 2152

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 108 IRVKPLSAREVLLEFQSADDMRVVLQEGKEFLKQKFMVITPCTRQTRSRSSLVWLKVHRV 167
           IR   +   +VLL   S  D   ++  G+ FL   F  I       R    L W++   +
Sbjct: 264 IRTTFMGDDQVLLLGLSEHDANQLINGGRTFL---FSSIERWHPNMRVDYRLTWIQCWGI 320

Query: 168 PVYAWSYDFFDAVVCTFSRLVCLDHPTSSRARFDVARVLVDAPEPLVAAREISILLDGEI 227
           PV AW+   F+ ++     +V +D     + R D AR+L+           + +++DG  
Sbjct: 321 PVQAWNPKHFNQIIAAMGEVVDIDDAVEEKRRVDKARLLIRTQWRPSIQHTVEVMIDGAK 380

Query: 228 IMVVVEPDHAQG 239
            MV +  +  QG
Sbjct: 381 FMVHITEESCQG 392


>Glyma13g13950.1 
          Length = 1474

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 42/79 (53%)

Query: 146 ITPCTRQTRSRSSLVWLKVHRVPVYAWSYDFFDAVVCTFSRLVCLDHPTSSRARFDVARV 205
           I   T + ++   L+W+ +  VP+  W    F  ++ TF  +V LD  T  R+R DVAR+
Sbjct: 338 IQKWTPEMKTEFRLIWIHIWGVPLEIWEAKHFQTLLSTFGEIVELDEQTVDRSRLDVARI 397

Query: 206 LVDAPEPLVAAREISILLD 224
           L+   E  + ++ +  L++
Sbjct: 398 LIRTKEKPIFSKSMKALVN 416