Miyakogusa Predicted Gene

Lj0g3v0023769.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0023769.1 Non Chatacterized Hit- tr|B6TYT6|B6TYT6_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2
SV=1,53.47,0.000000000003,seg,NULL; coiled-coil,NULL,CUFF.1329.1
         (374 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g05780.1                                                       367   e-101

>Glyma19g05780.1 
          Length = 325

 Score =  367 bits (941), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/339 (60%), Positives = 231/339 (68%), Gaps = 28/339 (8%)

Query: 1   MAGLLAWAADVVXXXXXXXXXSIPIIWSEDQRKYVWELDQKAXXXXXXXXXXXXXXXXXX 60
           MAGLLAWA              IPI++S DQ+KYV ELDQKA                  
Sbjct: 1   MAGLLAWAVGGGGGKEAEDDGIIPILFSADQQKYVNELDQKASSLRRWIHDLRQRLPPQD 60

Query: 61  XXQSLPHLHAHSLASNNALTLQLNSHSTTRQQAQLREVTLKEENAAFENAISNCENKIKE 120
             QSLPHLHAHSLASN AL LQLNSHSTTRQQAQLREVTLKEENAAFENAIS+CENKIKE
Sbjct: 61  ISQSLPHLHAHSLASNAALALQLNSHSTTRQQAQLREVTLKEENAAFENAISDCENKIKE 120

Query: 121 KLQEKDLLQRRLEEMDETEKKLRTDQDSVQQLQASQDAGKSWNSGAWEEETKTNSKAGSD 180
           KLQE DLL+ +L+               V+ ++       SW S  WEEE K NSKAG +
Sbjct: 121 KLQEADLLREKLK---------------VENMKQP-----SWVSDGWEEEKKANSKAGLE 160

Query: 181 ADVDVEAAKSAMLEELEQRKKDLNSMEDTVRELEKKWAVLQENAHKQPSPVQREKTLDKQ 240
           A+       SA+L+ELE++KKD++SME+ V ELEKKWA +QENA KQPSP QREKTLDK 
Sbjct: 161 AE-------SALLDELEKKKKDMSSMENAVHELEKKWAQVQENALKQPSPGQREKTLDKH 213

Query: 241 LHGLIEQLAVKQAQAEDLFSDIHLKEMELERLNGLWRRM-XXXXXXXXXXXXXFGKSSSD 299
           LHGLIEQLAVKQAQAE L  +IHLKEMELERLNGLWRR               F K SSD
Sbjct: 214 LHGLIEQLAVKQAQAEGLLGEIHLKEMELERLNGLWRRTESSNSEANTAARNRFSKGSSD 273

Query: 300 KLYGLSDYEGHQRLPYHSAGKTESQQRLMLLSCRVLLAV 338
           KL+ LSDYEGHQRLPYHSAG+TESQQRLMLL    +L +
Sbjct: 274 KLHSLSDYEGHQRLPYHSAGRTESQQRLMLLRSAFVLYI 312