Miyakogusa Predicted Gene

Lj0g3v0022809.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0022809.1 Non Chatacterized Hit- tr|K4AJV4|K4AJV4_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,38.56,8e-17,seg,NULL; FAMILY NOT NAMED,NULL,CUFF.1287.1
         (161 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g13110.1                                                        71   4e-13
Glyma09g02220.1                                                        70   7e-13
Glyma02g14200.1                                                        56   1e-08
Glyma01g10040.1                                                        56   2e-08
Glyma17g37570.1                                                        53   1e-07
Glyma14g40550.1                                                        53   1e-07
Glyma04g02800.1                                                        49   2e-06

>Glyma15g13110.1 
          Length = 437

 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 70  IPISAIADAAANSGEDEEAPLPP---EFLAATSAQKLPLGPNRNFDSDTVHAPAGAACTL 126
           I ++   +  +NS +  +  L     E   A    KLP G +    SD +H PAGA+C  
Sbjct: 99  IDLTRQQEKQSNSADQNQVSLKVGSDELSFALGPHKLPFGYSPRIGSDEIHLPAGASCMR 158

Query: 127 FPDDLRRFMTYPINGSCPDDELLSQKLLLKGCDPL 161
             ++L ++M Y I G CP D++L+Q+L+LKGC+P 
Sbjct: 159 LHEELTQYMAYEIGGECPMDDVLAQRLMLKGCEPF 193


>Glyma09g02220.1 
          Length = 382

 Score = 70.5 bits (171), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 43/65 (66%)

Query: 97  ATSAQKLPLGPNRNFDSDTVHAPAGAACTLFPDDLRRFMTYPINGSCPDDELLSQKLLLK 156
           A    KLP G +    SD +H P GA+C    ++L ++M+Y I G CP D++L+Q+L+LK
Sbjct: 130 ALGPHKLPFGYSPRIGSDEIHTPVGASCMRLHEELNQYMSYEIGGECPMDDVLAQRLMLK 189

Query: 157 GCDPL 161
           GC+PL
Sbjct: 190 GCEPL 194


>Glyma02g14200.1 
          Length = 463

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query: 111 FDSDTVHAPAGAACTLFPDDLRRFMTYPINGSCPDDELLSQKLLLKGCDPL 161
           + +D V+   G AC L+  +L ++M Y I   C DD  L+QKL+L GCDPL
Sbjct: 168 YGADKVYNTIGHACVLYKKELEKYMDYDIGSYCDDDWNLAQKLMLNGCDPL 218


>Glyma01g10040.1 
          Length = 354

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query: 111 FDSDTVHAPAGAACTLFPDDLRRFMTYPINGSCPDDELLSQKLLLKGCDPL 161
           + +D V+   G AC L+  +L ++M Y I   C DD  L+QKL+L GCDPL
Sbjct: 92  YGADKVYNTIGHACVLYKKELEKYMDYDIGSYCDDDWNLAQKLMLNGCDPL 142


>Glyma17g37570.1 
          Length = 422

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 35/61 (57%)

Query: 101 QKLPLGPNRNFDSDTVHAPAGAACTLFPDDLRRFMTYPINGSCPDDELLSQKLLLKGCDP 160
            +LPLG +       +    G  C    D L +FM Y + G+CPDD  ++QKL+LKGC+P
Sbjct: 117 HQLPLGKDSRTGITEMVPSVGHTCEKNSDFLSQFMNYKVFGACPDDWSVAQKLILKGCEP 176

Query: 161 L 161
           L
Sbjct: 177 L 177


>Glyma14g40550.1 
          Length = 421

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 35/61 (57%)

Query: 101 QKLPLGPNRNFDSDTVHAPAGAACTLFPDDLRRFMTYPINGSCPDDELLSQKLLLKGCDP 160
            +LPLG +       +    G  C    D L +FM Y + G+CPDD  ++QKL+LKGC+P
Sbjct: 116 HQLPLGKDSRTGITEMVPSVGHTCEKNSDLLSQFMNYKVFGACPDDWSVAQKLILKGCEP 175

Query: 161 L 161
           L
Sbjct: 176 L 176


>Glyma04g02800.1 
          Length = 420

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%)

Query: 101 QKLPLGPNRNFDSDTVHAPAGAACTLFPDDLRRFMTYPINGSCPDDELLSQKLLLKGCDP 160
            +LPLG +       + +  G +C    D L ++M+Y   G CP+D  ++QKL+LKGC+P
Sbjct: 114 HQLPLGKDSKSGITEMVSSVGHSCEKSSDLLSQYMSYKAFGPCPNDWSVAQKLILKGCEP 173

Query: 161 L 161
           L
Sbjct: 174 L 174