Miyakogusa Predicted Gene

Lj0g3v0022569.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0022569.1 Non Chatacterized Hit- tr|I1HKF6|I1HKF6_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,45.22,2e-18,seg,NULL,CUFF.1263.1
         (112 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g28420.1                                                       128   1e-30
Glyma11g28420.3                                                       124   2e-29
Glyma18g06720.1                                                       124   2e-29
Glyma11g28420.2                                                       123   4e-29
Glyma11g28420.4                                                       123   5e-29

>Glyma11g28420.1 
          Length = 181

 Score =  128 bits (322), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/108 (61%), Positives = 70/108 (64%)

Query: 1   MSAPNEEXXXXXXXXXXXXXXXXXXXIIVDVASECHRVARXXXXXXXXXXXXXXXXXAQA 60
           MS PNEE                   IIVDVASECHRVAR                 AQA
Sbjct: 1   MSVPNEENLSSHSQLSSHFFLDLLDSIIVDVASECHRVARLGLDSNLEEEDEELKLSAQA 60

Query: 61  RVRVADPSNNNEANGKYLVDIFGQTHPPVADEIFECMNCGRSIMAGRV 108
           RVRVADPSN+NEANGKY+VDIFGQTHPPVA+EIF+CMNCGRSIMAGR 
Sbjct: 61  RVRVADPSNSNEANGKYVVDIFGQTHPPVANEIFDCMNCGRSIMAGRF 108


>Glyma11g28420.3 
          Length = 173

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 60/82 (73%), Positives = 64/82 (78%)

Query: 27  IIVDVASECHRVARXXXXXXXXXXXXXXXXXAQARVRVADPSNNNEANGKYLVDIFGQTH 86
           IIVDVASECHRVAR                 AQARVRVADPSN+NEANGKY+VDIFGQTH
Sbjct: 19  IIVDVASECHRVARLGLDSNLEEEDEELKLSAQARVRVADPSNSNEANGKYVVDIFGQTH 78

Query: 87  PPVADEIFECMNCGRSIMAGRV 108
           PPVA+EIF+CMNCGRSIMAGR 
Sbjct: 79  PPVANEIFDCMNCGRSIMAGRF 100


>Glyma18g06720.1 
          Length = 225

 Score =  124 bits (311), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/108 (60%), Positives = 70/108 (64%), Gaps = 2/108 (1%)

Query: 1   MSAPNEEXXXXXXXXXXXXXXXXXXXIIVDVASECHRVARXXXXXXXXXXXXXXXXXAQA 60
           MS PNEE                   IIVDVASECHRVAR                 AQA
Sbjct: 47  MSVPNEENLSYSQLSYFFLDLLDS--IIVDVASECHRVARLGLDSNLEEEDEELKLSAQA 104

Query: 61  RVRVADPSNNNEANGKYLVDIFGQTHPPVADEIFECMNCGRSIMAGRV 108
           RVRVADPSN+NEANGKY+VDIFGQTHPPVA+EIF+C+NCGRSIMAGR 
Sbjct: 105 RVRVADPSNSNEANGKYVVDIFGQTHPPVANEIFDCLNCGRSIMAGRF 152


>Glyma11g28420.2 
          Length = 147

 Score =  123 bits (309), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 60/82 (73%), Positives = 64/82 (78%)

Query: 27  IIVDVASECHRVARXXXXXXXXXXXXXXXXXAQARVRVADPSNNNEANGKYLVDIFGQTH 86
           IIVDVASECHRVAR                 AQARVRVADPSN+NEANGKY+VDIFGQTH
Sbjct: 19  IIVDVASECHRVARLGLDSNLEEEDEELKLSAQARVRVADPSNSNEANGKYVVDIFGQTH 78

Query: 87  PPVADEIFECMNCGRSIMAGRV 108
           PPVA+EIF+CMNCGRSIMAGR 
Sbjct: 79  PPVANEIFDCMNCGRSIMAGRF 100


>Glyma11g28420.4 
          Length = 128

 Score =  123 bits (308), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 60/81 (74%), Positives = 64/81 (79%)

Query: 27  IIVDVASECHRVARXXXXXXXXXXXXXXXXXAQARVRVADPSNNNEANGKYLVDIFGQTH 86
           IIVDVASECHRVAR                 AQARVRVADPSN+NEANGKY+VDIFGQTH
Sbjct: 19  IIVDVASECHRVARLGLDSNLEEEDEELKLSAQARVRVADPSNSNEANGKYVVDIFGQTH 78

Query: 87  PPVADEIFECMNCGRSIMAGR 107
           PPVA+EIF+CMNCGRSIMAGR
Sbjct: 79  PPVANEIFDCMNCGRSIMAGR 99