Miyakogusa Predicted Gene

Lj0g3v0020899.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0020899.1 tr|F2DTA3|F2DTA3_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,41.1,2e-18,DUF179,Protein
of unknown function DUF179; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL,NODE_6563_length_695_cov_314.516541.path1.1
         (233 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g26280.1                                                       281   6e-76
Glyma18g49850.1                                                       261   6e-70
Glyma06g48330.3                                                        91   1e-18
Glyma06g48330.1                                                        91   1e-18
Glyma04g43580.1                                                        91   1e-18
Glyma04g43580.2                                                        90   2e-18
Glyma06g48330.2                                                        82   4e-16
Glyma08g26280.2                                                        63   3e-10

>Glyma08g26280.1 
          Length = 413

 Score =  281 bits (718), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 152/236 (64%), Positives = 166/236 (70%), Gaps = 11/236 (4%)

Query: 1   MEACFLTHSSFIKTPDQLIPSIRAGSLAYSKSKRPSQQFQSRKVGIPFTVSCCQFSSSS- 59
           MEACFL+H+SF KT DQLIP+IR GSL + K  R SQ  Q RK  IP  +SCC  SS S 
Sbjct: 113 MEACFLSHNSFTKTTDQLIPTIRNGSLPHHK--RSSQHLQCRKARIPLPISCCHMSSPSP 170

Query: 60  --GEDKPIVNADWRSFRAKLVAGEQILKPEXXXXXXXXXXXXXXSPLITIGDKWAHIIHE 117
              +DKP +++DWRSFRAKLVAGEQ+ +                 PLITIGDKWAH+IHE
Sbjct: 171 FGDDDKPTLSSDWRSFRAKLVAGEQLTR--HVEEVNDLDTVVDHPPLITIGDKWAHVIHE 228

Query: 118 PERGCLLIATEKLDGVHIFERTVILLLATGPIGPSGIILNRPSLMSIKETRSTAFDVEDT 177
           PE GCLLIATEKLDGVHIFERTVILLL+TGP+GPSGIILNRPSLMSIKETRSTA DVE T
Sbjct: 229 PENGCLLIATEKLDGVHIFERTVILLLSTGPLGPSGIILNRPSLMSIKETRSTALDVEGT 288

Query: 178 FSNSXXXXXXXXXXXXXXXSPKXXXXXXXXXXAVGKSGVFEEVMKGLYYGAKESVG 233
           FSNS               SPK           VGKSGVFEEVMKGLYYGAKESVG
Sbjct: 289 FSNSPLFFGGPLEEGIFLLSPK----EGNGGDGVGKSGVFEEVMKGLYYGAKESVG 340


>Glyma18g49850.1 
          Length = 307

 Score =  261 bits (666), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 146/239 (61%), Positives = 162/239 (67%), Gaps = 11/239 (4%)

Query: 1   MEACFLTHSSFIKTPDQLIPSIRAGSLAYSKSKRPSQQFQSRKVGIPFTVSCCQFSSSS- 59
           MEACFL+H+SF KT DQLIP+IR GSL + K  R SQ F  RK  IP  +S C  SS S 
Sbjct: 1   MEACFLSHNSFTKTTDQLIPTIRNGSLPHPK--RSSQHFHYRKARIPLPISGCHMSSPSP 58

Query: 60  --GEDKPIVNADWRSFRAKLVAGEQILKPEXXXXXXXXXX---XXXXSPLITIGDKWAHI 114
              ++K  ++ DWRSFRAKLVAGEQ+ +P                   PLITIGDKWAH+
Sbjct: 59  FDDDEKSTLSGDWRSFRAKLVAGEQLTRPVEEVSFSSVNDLDIVVDHPPLITIGDKWAHV 118

Query: 115 IHEPERGCLLIATEKLDGVHIFERTVILLLATGPIGPSGIILNRPSLMSIKETRSTAFDV 174
           IHEPE+GC+LIATEKLDGVHIFERTVILLL+TGP+GPSGIILNRPSLMSIKETRSTA DV
Sbjct: 119 IHEPEKGCILIATEKLDGVHIFERTVILLLSTGPLGPSGIILNRPSLMSIKETRSTALDV 178

Query: 175 EDTFSNSXXXXXXXXXXXXXXXSPKXXXXXXXXXXAVGKSGVFEEVMKGLYYGAKESVG 233
           E TFSNS               SPK              SGVFEEVMKGLYYGAKESVG
Sbjct: 179 EGTFSNSPLFFGGPLEEGLFLLSPKEGGGGGDGVGK---SGVFEEVMKGLYYGAKESVG 234


>Glyma06g48330.3 
          Length = 340

 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/181 (36%), Positives = 84/181 (46%), Gaps = 18/181 (9%)

Query: 56  SSSSGEDKPIVNADWRSFRAKLVAGEQILKPEXXXXXXXXXXXXXXSPLITIGDKWAHII 115
           S ++ E     N DWR FRAKL   E + +                 PL   G +WAH I
Sbjct: 90  SDNNSEKCHHTNLDWREFRAKLYRDE-LKEISDADTHNQGGTLPISKPL---GAQWAHPI 145

Query: 116 HEPERGCLLIATEKLDGVHIFERTVILLLATGPI----GPSGIILNRPSLMSIKETRSTA 171
             PE GC+L+ATEKLDGV  FERTVILLL +G      GP GI++NRP    IK  + T 
Sbjct: 146 PVPETGCVLVATEKLDGVRTFERTVILLLRSGTRHHQGGPFGIVINRPLHKKIKHMKPTN 205

Query: 172 FDVEDTFSNSXXXXXXXXXXXXXXXSPKXXXXXXXXXXAVGKSGVFEEVMKGLYYGAKES 231
            D+  TFS+                 P              K   FEEV+ GL +G++ S
Sbjct: 206 HDLLTTFSDC----------SLHFGGPLEASMVLLKTEEKMKLPGFEEVIPGLCFGSRNS 255

Query: 232 V 232
           +
Sbjct: 256 L 256


>Glyma06g48330.1 
          Length = 340

 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/181 (36%), Positives = 84/181 (46%), Gaps = 18/181 (9%)

Query: 56  SSSSGEDKPIVNADWRSFRAKLVAGEQILKPEXXXXXXXXXXXXXXSPLITIGDKWAHII 115
           S ++ E     N DWR FRAKL   E + +                 PL   G +WAH I
Sbjct: 90  SDNNSEKCHHTNLDWREFRAKLYRDE-LKEISDADTHNQGGTLPISKPL---GAQWAHPI 145

Query: 116 HEPERGCLLIATEKLDGVHIFERTVILLLATGPI----GPSGIILNRPSLMSIKETRSTA 171
             PE GC+L+ATEKLDGV  FERTVILLL +G      GP GI++NRP    IK  + T 
Sbjct: 146 PVPETGCVLVATEKLDGVRTFERTVILLLRSGTRHHQGGPFGIVINRPLHKKIKHMKPTN 205

Query: 172 FDVEDTFSNSXXXXXXXXXXXXXXXSPKXXXXXXXXXXAVGKSGVFEEVMKGLYYGAKES 231
            D+  TFS+                 P              K   FEEV+ GL +G++ S
Sbjct: 206 HDLLTTFSDC----------SLHFGGPLEASMVLLKTEEKMKLPGFEEVIPGLCFGSRNS 255

Query: 232 V 232
           +
Sbjct: 256 L 256


>Glyma04g43580.1 
          Length = 340

 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 85/181 (46%), Gaps = 18/181 (9%)

Query: 56  SSSSGEDKPIVNADWRSFRAKLVAGEQILKPEXXXXXXXXXXXXXXSPLITIGDKWAHII 115
           S ++ E     N DWR FRAKL   +++ +                 PL   G +WAH I
Sbjct: 90  SENNSEKCHHTNLDWREFRAKLYR-DELKEISDADMHNQGGTLPNSKPL---GTQWAHPI 145

Query: 116 HEPERGCLLIATEKLDGVHIFERTVILLLATGPI----GPSGIILNRPSLMSIKETRSTA 171
             PE GC+L+ATEKLDG+  FERTVILLL +G      GP GI++NRP    IK  + T 
Sbjct: 146 PVPEAGCVLVATEKLDGIRTFERTVILLLRSGTRHHQGGPFGIVINRPLHKKIKHLKPTN 205

Query: 172 FDVEDTFSNSXXXXXXXXXXXXXXXSPKXXXXXXXXXXAVGKSGVFEEVMKGLYYGAKES 231
            D+  TFS+                 P              K   FEEV+ GL +G++ S
Sbjct: 206 HDLLTTFSDC----------SLHFGGPLEASMVLLKTEEKMKLPGFEEVIPGLCFGSRNS 255

Query: 232 V 232
           +
Sbjct: 256 L 256


>Glyma04g43580.2 
          Length = 281

 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 85/181 (46%), Gaps = 18/181 (9%)

Query: 56  SSSSGEDKPIVNADWRSFRAKLVAGEQILKPEXXXXXXXXXXXXXXSPLITIGDKWAHII 115
           S ++ E     N DWR FRAKL   +++ +                 PL   G +WAH I
Sbjct: 31  SENNSEKCHHTNLDWREFRAKLYR-DELKEISDADMHNQGGTLPNSKPL---GTQWAHPI 86

Query: 116 HEPERGCLLIATEKLDGVHIFERTVILLLATGPI----GPSGIILNRPSLMSIKETRSTA 171
             PE GC+L+ATEKLDG+  FERTVILLL +G      GP GI++NRP    IK  + T 
Sbjct: 87  PVPEAGCVLVATEKLDGIRTFERTVILLLRSGTRHHQGGPFGIVINRPLHKKIKHLKPTN 146

Query: 172 FDVEDTFSNSXXXXXXXXXXXXXXXSPKXXXXXXXXXXAVGKSGVFEEVMKGLYYGAKES 231
            D+  TFS+                 P              K   FEEV+ GL +G++ S
Sbjct: 147 HDLLTTFSDC----------SLHFGGPLEASMVLLKTEEKMKLPGFEEVIPGLCFGSRNS 196

Query: 232 V 232
           +
Sbjct: 197 L 197


>Glyma06g48330.2 
          Length = 284

 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 67/130 (51%), Gaps = 14/130 (10%)

Query: 107 IGDKWAHIIHEPERGCLLIATEKLDGVHIFERTVILLLATGPI----GPSGIILNRPSLM 162
           +G +WAH I  PE GC+L+ATEKLDGV  FERTVILLL +G      GP GI++NRP   
Sbjct: 81  LGAQWAHPIPVPETGCVLVATEKLDGVRTFERTVILLLRSGTRHHQGGPFGIVINRPLHK 140

Query: 163 SIKETRSTAFDVEDTFSNSXXXXXXXXXXXXXXXSPKXXXXXXXXXXAVGKSGVFEEVMK 222
            IK  + T  D+  TFS+                 P              K   FEEV+ 
Sbjct: 141 KIKHMKPTNHDLLTTFSDC----------SLHFGGPLEASMVLLKTEEKMKLPGFEEVIP 190

Query: 223 GLYYGAKESV 232
           GL +G++ S+
Sbjct: 191 GLCFGSRNSL 200


>Glyma08g26280.2 
          Length = 215

 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 2/51 (3%)

Query: 1   MEACFLTHSSFIKTPDQLIPSIRAGSLAYSKSKRPSQQFQSRKVGIPFTVS 51
           MEACFL+H+SF KT DQLIP+IR GSL +   KR SQ  Q RK  IP  +S
Sbjct: 113 MEACFLSHNSFTKTTDQLIPTIRNGSLPH--HKRSSQHLQCRKARIPLPIS 161