Miyakogusa Predicted Gene

Lj0g3v0020869.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0020869.1 Non Chatacterized Hit- tr|G7L350|G7L350_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,81.6,0,SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,NULL;
seg,NULL,NODE_10168_length_1497_cov_75.666000.path1.1
         (326 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g05840.1                                                       454   e-128
Glyma19g03360.1                                                       105   5e-23
Glyma18g49860.1                                                       102   5e-22

>Glyma13g05840.1 
          Length = 444

 Score =  454 bits (1167), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 226/326 (69%), Positives = 270/326 (82%), Gaps = 4/326 (1%)

Query: 1   MERVEAVYHDRAAETGSLVVSACGFDSVPAELGIMFNSRQWVSPAVPNRVEAYVSLESEK 60
           MERVE  YH  A + GSLVVSACGFDSVPAE+G +F+SRQWV PA PNRV AY+SLES+K
Sbjct: 123 MERVEREYHAEATKKGSLVVSACGFDSVPAEMGFLFHSRQWVGPARPNRVGAYLSLESDK 182

Query: 61  SIVGNFATYESAVLGVANANKLQELXXXXXXXXXXLIPGPPPSKGETIENQKKIGLWAVK 120
            IVGNF T+ESAV+ V +   L+E+           IPGPPP KGE IE+QKKIGLW V 
Sbjct: 183 RIVGNFGTFESAVMAVKD---LKEMERSRVTRVIPEIPGPPP-KGEIIEHQKKIGLWGVT 238

Query: 121 LPSADAAVVRRTLAILKENPNGLTGLNESSEVVEKREAFWSSVKPAHFGVKIGTKSLLGI 180
           LPSADA +V RTL+ L E+P+GL GLNE++E+VEKR+A+W+SVKPAHFGVKIG+KSLL +
Sbjct: 239 LPSADATLVGRTLSTLTESPHGLPGLNENAEMVEKRKAYWTSVKPAHFGVKIGSKSLLHV 298

Query: 181 LRIIMVGICIGLLGNTGFGRWLLLKFPSVFSLGWFKKNGPSEEEVEKASFKMWFVGRGFS 240
              I++GI IG+LG T FGRWLLLK+PS+F+ G F KNGPSEEE+  ASFKMWFVG GFS
Sbjct: 299 FGFILIGIIIGVLGRTSFGRWLLLKYPSIFTFGGFSKNGPSEEEIASASFKMWFVGHGFS 358

Query: 241 NVSLASQGNSKPDMEIVTRVTGPEIGYIATPIILIQCALILLSQRRNLPKGGVYPPGIIF 300
           N SLA+QGN+KPDMEI+TRV GPE+GY+ TPII++QCAL+L  QR+NLPKGGVY PGI+F
Sbjct: 359 NESLAAQGNTKPDMEIITRVMGPEMGYVTTPIIMVQCALVLHGQRKNLPKGGVYTPGIVF 418

Query: 301 GPTDLQERLQQNGISFDMISKTTISS 326
           GPTDLQERLQQNGISFD+ISK++ISS
Sbjct: 419 GPTDLQERLQQNGISFDVISKSSISS 444


>Glyma19g03360.1 
          Length = 72

 Score =  105 bits (263), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 51/72 (70%), Positives = 62/72 (86%), Gaps = 1/72 (1%)

Query: 97  IPGPPPSKGETIENQKKIGLWAVKLPSADAAVVRRTLAILKENPNGLTGLNESSEVVEKR 156
           IPGPPP+ GE IE+QKKIGLW V L SADA +V RTL+ L E+P+GL GLNES+E+VEKR
Sbjct: 1   IPGPPPN-GEIIEHQKKIGLWGVTLASADATLVGRTLSTLTESPHGLPGLNESAEMVEKR 59

Query: 157 EAFWSSVKPAHF 168
           +A+W+SVKPAHF
Sbjct: 60  KAYWTSVKPAHF 71


>Glyma18g49860.1 
          Length = 160

 Score =  102 bits (254), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 47/56 (83%), Positives = 53/56 (94%)

Query: 271 PIILIQCALILLSQRRNLPKGGVYPPGIIFGPTDLQERLQQNGISFDMISKTTISS 326
           P+ + QCAL+LLSQR NLPKGGVYPPGIIFGPTDLQERLQQNGISFD+IS++TISS
Sbjct: 105 PVEVGQCALVLLSQRDNLPKGGVYPPGIIFGPTDLQERLQQNGISFDVISESTISS 160