Miyakogusa Predicted Gene

Lj0g3v0020849.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0020849.1 Non Chatacterized Hit- tr|H3GQR2|H3GQR2_PHYRM
Uncharacterized protein OS=Phytophthora ramorum
GN=fge,60.98,1e-18,DUF382,Domain of unknown function DUF382; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.1158.1
         (113 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g25110.1                                                       125   1e-29
Glyma13g25110.2                                                       124   2e-29
Glyma13g31550.1                                                       123   5e-29
Glyma13g31550.2                                                       122   9e-29
Glyma15g07760.1                                                       122   1e-28
Glyma07g31350.1                                                       102   9e-23

>Glyma13g25110.1 
          Length = 577

 Score =  125 bits (313), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/82 (79%), Positives = 69/82 (84%), Gaps = 6/82 (7%)

Query: 1   MQPKM---VIDYQVLHDAFFKYQTKPKLTSLGELYHEGKEFEVKLREMKPDMLSHELKEA 57
           MQPKM    IDYQVLHDAFFKYQTKPKLTSLGELYHEGKEFEVKLREMKP MLSHELKEA
Sbjct: 252 MQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGELYHEGKEFEVKLREMKPGMLSHELKEA 311

Query: 58  PGMPEGAPPNYEEPVFNTKHWG 79
            GMPEGAPP +   + N + +G
Sbjct: 312 LGMPEGAPPPW---LINMQRYG 330


>Glyma13g25110.2 
          Length = 556

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/82 (79%), Positives = 69/82 (84%), Gaps = 6/82 (7%)

Query: 1   MQPKM---VIDYQVLHDAFFKYQTKPKLTSLGELYHEGKEFEVKLREMKPDMLSHELKEA 57
           MQPKM    IDYQVLHDAFFKYQTKPKLTSLGELYHEGKEFEVKLREMKP MLSHELKEA
Sbjct: 252 MQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGELYHEGKEFEVKLREMKPGMLSHELKEA 311

Query: 58  PGMPEGAPPNYEEPVFNTKHWG 79
            GMPEGAPP +   + N + +G
Sbjct: 312 LGMPEGAPPPW---LINMQRYG 330


>Glyma13g31550.1 
          Length = 575

 Score =  123 bits (308), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 63/82 (76%), Positives = 69/82 (84%), Gaps = 6/82 (7%)

Query: 1   MQPKM---VIDYQVLHDAFFKYQTKPKLTSLGELYHEGKEFEVKLREMKPDMLSHELKEA 57
           MQPKM    IDYQVLHDAFFKYQTKPKLTSLG+LYHEGKEFEVKLREMKP MLSHELKEA
Sbjct: 251 MQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGDLYHEGKEFEVKLREMKPGMLSHELKEA 310

Query: 58  PGMPEGAPPNYEEPVFNTKHWG 79
            GMPEG+PP +   + N + +G
Sbjct: 311 LGMPEGSPPPW---LINMQRYG 329


>Glyma13g31550.2 
          Length = 538

 Score =  122 bits (306), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 63/82 (76%), Positives = 69/82 (84%), Gaps = 6/82 (7%)

Query: 1   MQPKM---VIDYQVLHDAFFKYQTKPKLTSLGELYHEGKEFEVKLREMKPDMLSHELKEA 57
           MQPKM    IDYQVLHDAFFKYQTKPKLTSLG+LYHEGKEFEVKLREMKP MLSHELKEA
Sbjct: 251 MQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGDLYHEGKEFEVKLREMKPGMLSHELKEA 310

Query: 58  PGMPEGAPPNYEEPVFNTKHWG 79
            GMPEG+PP +   + N + +G
Sbjct: 311 LGMPEGSPPPW---LINMQRYG 329


>Glyma15g07760.1 
          Length = 575

 Score =  122 bits (305), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/82 (76%), Positives = 68/82 (82%), Gaps = 6/82 (7%)

Query: 1   MQPKM---VIDYQVLHDAFFKYQTKPKLTSLGELYHEGKEFEVKLREMKPDMLSHELKEA 57
           MQPKM    IDYQVLHDAFFKYQTKPKLTSLG+LYHEGKEFEVKLREMKP MLS ELKEA
Sbjct: 251 MQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGDLYHEGKEFEVKLREMKPGMLSQELKEA 310

Query: 58  PGMPEGAPPNYEEPVFNTKHWG 79
            GMPEGAPP +   + N + +G
Sbjct: 311 LGMPEGAPPPW---LINMQRYG 329


>Glyma07g31350.1 
          Length = 382

 Score =  102 bits (254), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 49/57 (85%), Positives = 51/57 (89%)

Query: 10  QVLHDAFFKYQTKPKLTSLGELYHEGKEFEVKLREMKPDMLSHELKEAPGMPEGAPP 66
           QV HD FF YQTKPK TSLG+LYHEGKEFEVKLREMKP MLSHELKEA G+PEGAPP
Sbjct: 103 QVFHDVFFNYQTKPKRTSLGDLYHEGKEFEVKLREMKPGMLSHELKEALGIPEGAPP 159