Miyakogusa Predicted Gene
- Lj0g3v0018479.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0018479.1 tr|I3SWZ4|I3SWZ4_LOTJA Peptidyl-prolyl cis-trans
isomerase OS=Lotus japonicus PE=2
SV=1,82.14,5e-18,Cyclophilin-like,Cyclophilin-like peptidyl-prolyl
cis-trans isomerase domain; PEPTIDYL-PROLYL CIS-TR,CUFF.1070.1
(76 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma18g07030.1 89 1e-18
Glyma11g27000.1 85 2e-17
Glyma11g35280.1 80 5e-16
Glyma18g03120.1 76 7e-15
Glyma11g11370.1 64 4e-11
Glyma12g03540.1 63 8e-11
Glyma04g00580.1 59 8e-10
Glyma06g00650.1 55 1e-08
Glyma12g02790.1 53 6e-08
Glyma19g34290.2 53 6e-08
Glyma19g34290.1 53 6e-08
Glyma04g00700.1 52 1e-07
Glyma06g00740.1 52 1e-07
Glyma20g39340.3 52 1e-07
Glyma20g39340.1 52 1e-07
Glyma03g31440.1 51 2e-07
Glyma10g27990.1 51 2e-07
Glyma10g44560.1 50 4e-07
Glyma11g10480.1 49 9e-07
Glyma20g39340.2 49 1e-06
Glyma03g41210.2 47 5e-06
Glyma03g41210.1 47 5e-06
Glyma19g43830.1 47 6e-06
>Glyma18g07030.1
Length = 226
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 46/56 (82%)
Query: 21 KLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSGELPL 76
+ I + LDGRHVVFGKVLSGMDVVYK+EAEG QSGTPKSKVVI DSGELPL
Sbjct: 171 QFFITTVTTSWLDGRHVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGELPL 226
>Glyma11g27000.1
Length = 204
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 45/56 (80%)
Query: 21 KLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSGELPL 76
+ I + LDGRHVVFG+VLSG+DVVY +EAEG QSGTPKSKVVI DSGELPL
Sbjct: 149 QFFITTVTTSWLDGRHVVFGRVLSGLDVVYNIEAEGTQSGTPKSKVVIVDSGELPL 204
>Glyma11g35280.1
Length = 238
Score = 80.1 bits (196), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/43 (83%), Positives = 42/43 (97%)
Query: 32 LDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSGEL 74
LDGRHVVFGKVLSGMDV+YK+EAEG++SG+PK+KVVI DSGEL
Sbjct: 194 LDGRHVVFGKVLSGMDVLYKIEAEGSESGSPKNKVVILDSGEL 236
>Glyma18g03120.1
Length = 235
Score = 76.3 bits (186), Expect = 7e-15, Method: Composition-based stats.
Identities = 34/43 (79%), Positives = 41/43 (95%)
Query: 32 LDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSGEL 74
LDG HVVFGKVLSGMDV+YK+EAEG+++G+PK+KVVI DSGEL
Sbjct: 191 LDGHHVVFGKVLSGMDVLYKIEAEGSENGSPKNKVVILDSGEL 233
>Glyma11g11370.1
Length = 236
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 32 LDGRHVVFGKVLSGMDVVYKME-AEGNQSGTPKSKVVIADSGELP 75
LDG HVVFGKV+ GMD+VY +E G SG P+ KVVIADSGE+P
Sbjct: 184 LDGEHVVFGKVVQGMDIVYVIEGGAGTYSGKPRKKVVIADSGEIP 228
>Glyma12g03540.1
Length = 236
Score = 62.8 bits (151), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/45 (64%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 32 LDGRHVVFGKVLSGMDVVYKME-AEGNQSGTPKSKVVIADSGELP 75
LDG HVVFG+V+ GMD+VY +E G SG P+ KVVIADSGE+P
Sbjct: 184 LDGEHVVFGRVVQGMDIVYVIEGGAGTYSGKPRKKVVIADSGEIP 228
>Glyma04g00580.1
Length = 232
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 32 LDGRHVVFGKVLSGMDVVYKME-AEGNQSGTPKSKVVIADSGELP 75
LDG HVVFGKV+ GMD V+ +E G +G P+ KVVIADSGE+P
Sbjct: 180 LDGEHVVFGKVVQGMDTVFAIEGGAGTYNGKPRKKVVIADSGEIP 224
>Glyma06g00650.1
Length = 199
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 21 KLLINAHISDRLDGRHVVFGKVLSGMDVVYKME-AEGNQSGTPKSKVVIADSGELP 75
+ I + LDG H VFGKV+ GMD V+ +E G +G P+ KVVIADSGE+P
Sbjct: 136 QFFITTVKTGWLDGEHGVFGKVVQGMDSVFAIEGGAGTYNGKPRKKVVIADSGEIP 191
>Glyma12g02790.1
Length = 172
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 1 MNMLYKMPILIYSTFLPCFKKLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSG 60
++M P S F C K ++ LDG+HVVFG+V+ GMDVV ++E G+ SG
Sbjct: 105 LSMANAGPGTNGSQFFICTTK-------TEWLDGKHVVFGQVVEGMDVVKEIEKVGSSSG 157
Query: 61 TPKSKVVIADSGEL 74
VV+AD G+L
Sbjct: 158 RTAKPVVVADCGQL 171
>Glyma19g34290.2
Length = 635
Score = 53.1 bits (126), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 13 STFLPCFKKLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSG 72
S F FK+ LDG+HVVFGKV++GMD++ K+E G G P V I D G
Sbjct: 121 SQFFITFKR-------QPHLDGKHVVFGKVVNGMDILKKIEPVGTSDGKPTQPVKIIDCG 173
Query: 73 EL 74
E+
Sbjct: 174 EV 175
>Glyma19g34290.1
Length = 659
Score = 53.1 bits (126), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 13 STFLPCFKKLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSG 72
S F FK+ LDG+HVVFGKV++GMD++ K+E G G P V I D G
Sbjct: 121 SQFFITFKR-------QPHLDGKHVVFGKVVNGMDILKKIEPVGTSDGKPTQPVKIIDCG 173
Query: 73 EL 74
E+
Sbjct: 174 EV 175
>Glyma04g00700.1
Length = 172
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 1 MNMLYKMPILIYSTFLPCFKKLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSG 60
++M P S F C K ++ LDG+HVVFG+V+ G+DVV +E G+ SG
Sbjct: 105 LSMANAGPGTNGSQFFICTVK-------TEWLDGKHVVFGQVVEGLDVVKDIEKVGSSSG 157
Query: 61 TPKSKVVIADSGEL 74
VV+ADSG+L
Sbjct: 158 KTSKPVVVADSGQL 171
>Glyma06g00740.1
Length = 172
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 1 MNMLYKMPILIYSTFLPCFKKLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSG 60
++M P S F C K ++ LDG+HVVFG+V+ G+DVV +E G+ SG
Sbjct: 105 LSMANAGPGTNGSQFFICTVK-------TEWLDGKHVVFGQVVEGLDVVKDIEKVGSSSG 157
Query: 61 TPKSKVVIADSGEL 74
VV+ADSG+L
Sbjct: 158 KTSKPVVVADSGQL 171
>Glyma20g39340.3
Length = 252
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 32 LDGRHVVFGKVLSGMDVVYKMEAEGNQSGT-PKSKVVIADSGELP 75
LD RHVVFG+VL GMD+V +E++ G P KV I+D GELP
Sbjct: 206 LDQRHVVFGQVLEGMDIVRLIESQETDRGDRPTKKVTISDCGELP 250
>Glyma20g39340.1
Length = 253
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 32 LDGRHVVFGKVLSGMDVVYKMEAEGNQSGT-PKSKVVIADSGELP 75
LD RHVVFG+VL GMD+V +E++ G P KV I+D GELP
Sbjct: 207 LDQRHVVFGQVLEGMDIVRLIESQETDRGDRPTKKVTISDCGELP 251
>Glyma03g31440.1
Length = 668
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 13 STFLPCFKKLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSG 72
S F FK+ LDG+HVVFGKV++G+D++ K+E G G P V I D G
Sbjct: 121 SQFFITFKR-------QPHLDGKHVVFGKVVNGIDILKKIEQVGTSDGKPTQPVKIIDCG 173
Query: 73 EL 74
E+
Sbjct: 174 EV 175
>Glyma10g27990.1
Length = 263
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 32 LDGRHVVFGKVLSGMDVVYKMEA-EGNQSGTPKSKVVIADSGELPL 76
LD RHVVFG V+ GMDVV +E+ E + P+ IADSGELP+
Sbjct: 216 LDNRHVVFGHVIDGMDVVRTLESQETGKFDNPRKPCKIADSGELPI 261
>Glyma10g44560.1
Length = 265
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 32 LDGRHVVFGKVLSGMDVVYKMEAEGNQSGT-PKSKVVIADSGELPL 76
LD RHVVFG+VL GM +V +E++ G P+ KV I+D GELP+
Sbjct: 219 LDQRHVVFGQVLEGMAIVRLIESQETDRGDRPRKKVTISDCGELPI 264
>Glyma11g10480.1
Length = 172
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 1 MNMLYKMPILIYSTFLPCFKKLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSG 60
++M P S F C +K ++ LDG+HVVFG+V+ G++VV +E G+ SG
Sbjct: 105 LSMANAGPGTNGSQFFICTEK-------TEWLDGKHVVFGQVIEGLNVVKDIEKVGSSSG 157
Query: 61 TPKSKVVIADSGEL 74
VVIA+ G+L
Sbjct: 158 RTSKPVVIANCGQL 171
>Glyma20g39340.2
Length = 212
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 32 LDGRHVVFGKVLSGMDVVYKMEAEGNQSG-TPKSKVVIADSGELP 75
LD RHVVFG+VL GMD+V +E++ G P KV I+D GELP
Sbjct: 166 LDQRHVVFGQVLEGMDIVRLIESQETDRGDRPTKKVTISDCGELP 210
>Glyma03g41210.2
Length = 175
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 1 MNMLYKMPILIYSTFLPCFKKLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSG 60
++M P S F C K + LDG+HVVFGKV+ G VV +ME G+ SG
Sbjct: 106 LSMANAGPHTNGSQFFICTAK-------TPWLDGKHVVFGKVVDGYSVVEEMEKVGSGSG 158
Query: 61 TPKSKVVIADSGEL 74
VVI D G++
Sbjct: 159 RTSEPVVIEDCGQI 172
>Glyma03g41210.1
Length = 175
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 1 MNMLYKMPILIYSTFLPCFKKLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSG 60
++M P S F C K + LDG+HVVFGKV+ G VV +ME G+ SG
Sbjct: 106 LSMANAGPHTNGSQFFICTAK-------TPWLDGKHVVFGKVVDGYSVVEEMEKVGSGSG 158
Query: 61 TPKSKVVIADSGEL 74
VVI D G++
Sbjct: 159 RTSEPVVIEDCGQI 172
>Glyma19g43830.1
Length = 175
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 32 LDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSGEL 74
LDG+HVVFGKV+ G VV +ME G+ SG VVI D G++
Sbjct: 130 LDGKHVVFGKVVDGYSVVQEMEKVGSGSGRTSEPVVIEDCGQI 172