Miyakogusa Predicted Gene

Lj0g3v0017229.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0017229.2 CUFF.963.2
         (162 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g33130.1                                                       161   4e-40
Glyma13g02790.1                                                        60   7e-10

>Glyma14g33130.1 
          Length = 140

 Score =  161 bits (407), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 91/138 (65%), Positives = 102/138 (73%), Gaps = 7/138 (5%)

Query: 26  PLLCIGDLLGDVXXXXXXXXXXXXXSLRRETSPPPPASDLSNAPPLPLPDLTKLFQENYE 85
           PLLCIGDLL DV             SL RET P     +  N PP   PDLTKLFQE+Y+
Sbjct: 9   PLLCIGDLLNDVGEEEQQHGQGH--SLLRETFPSSSNFNY-NDPP---PDLTKLFQEHYD 62

Query: 86  HLNSALAGTDHTWPSLTLKLCTALETANQLVQCTNSNVASLLEKVEELQKIVKRGDSAIV 145
           HLNSAL+GTDH+W SLTLKLCTALET+NQLVQ TN+NVASL +KVE+LQKIVKRGDSAI 
Sbjct: 63  HLNSALSGTDHSWTSLTLKLCTALETSNQLVQSTNTNVASLSKKVEDLQKIVKRGDSAIA 122

Query: 146 AAKAV-YVTQDNQSGSLK 162
           AAKA+ YVT DN S + K
Sbjct: 123 AAKALYYVTPDNHSSASK 140


>Glyma13g02790.1 
          Length = 134

 Score = 60.5 bits (145), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 11/80 (13%)

Query: 26  PLLCIGDLLGDVXXXXXXXXXXXXXSLRRETSPPPPASDLSNAPPLPLPDLTKLFQENYE 85
           PLLCIGDLL D+             SL RE SP P +S L+N         TKLFQE+Y+
Sbjct: 9   PLLCIGDLLNDIGEEEEEGRGH---SLLREASPSPSSSLLNNL--------TKLFQEHYD 57

Query: 86  HLNSALAGTDHTWPSLTLKL 105
           HLNS L+GTDH+W SLTLK+
Sbjct: 58  HLNSTLSGTDHSWTSLTLKV 77