Miyakogusa Predicted Gene

Lj0g3v0017049.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0017049.1 Non Chatacterized Hit- tr|K3YIP7|K3YIP7_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si014116,49.5,1e-16,seg,NULL; PREDICTED PROTEIN,NULL; MEMBRANE
ASSOCIATED RING
FINGER,NULL,NODE_67104_length_933_cov_108.628082.path1.1
         (114 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g02420.1                                                       195   1e-50
Glyma11g36020.1                                                       194   2e-50
Glyma05g31600.1                                                       143   4e-35
Glyma05g08220.2                                                        77   4e-15
Glyma05g08220.1                                                        77   4e-15
Glyma17g12750.4                                                        77   4e-15
Glyma17g12750.3                                                        77   4e-15
Glyma17g12750.2                                                        77   4e-15
Glyma17g12750.1                                                        77   4e-15
Glyma13g45010.1                                                        66   1e-11
Glyma15g00320.3                                                        66   1e-11
Glyma15g00320.2                                                        66   1e-11
Glyma15g00320.1                                                        66   1e-11

>Glyma18g02420.1 
          Length = 323

 Score =  195 bits (495), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 96/114 (84%), Positives = 98/114 (85%)

Query: 1   MWTDCTTCFESCGTMATXXXXXXXXXXXXXXPLLFIMALIVLGLFTVIGIFYSVLVATMV 60
           MWTDCTTCFESCGTMAT              PLLFIMALIVLGLFTVIGIFYSVLVATMV
Sbjct: 210 MWTDCTTCFESCGTMATECGGCLGGAGEAGLPLLFIMALIVLGLFTVIGIFYSVLVATMV 269

Query: 61  GQRIWQRHYHILAKRMLTKEYVVEDVDGEMTDSDWSPPVLPPEHVQQLKTLGLL 114
           GQRIWQRHYHILAKRMLTKEYVVEDVDGE+T SDWSPP LPPEH+QQLKTLGLL
Sbjct: 270 GQRIWQRHYHILAKRMLTKEYVVEDVDGELTGSDWSPPALPPEHIQQLKTLGLL 323


>Glyma11g36020.1 
          Length = 323

 Score =  194 bits (493), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 96/114 (84%), Positives = 97/114 (85%)

Query: 1   MWTDCTTCFESCGTMATXXXXXXXXXXXXXXPLLFIMALIVLGLFTVIGIFYSVLVATMV 60
           MWTDCTTCFESCGTMAT              PLLFIMALIVLGLFTVIGIFYSVLVATMV
Sbjct: 210 MWTDCTTCFESCGTMATECGGCLGGAGEAGLPLLFIMALIVLGLFTVIGIFYSVLVATMV 269

Query: 61  GQRIWQRHYHILAKRMLTKEYVVEDVDGEMTDSDWSPPVLPPEHVQQLKTLGLL 114
           GQRIWQRHYHILAKRMLTKEYVVED DGE+T SDWSPP LPPEHVQQLKTLGLL
Sbjct: 270 GQRIWQRHYHILAKRMLTKEYVVEDADGELTGSDWSPPALPPEHVQQLKTLGLL 323


>Glyma05g31600.1 
          Length = 324

 Score =  143 bits (360), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 74/114 (64%), Positives = 83/114 (72%)

Query: 1   MWTDCTTCFESCGTMATXXXXXXXXXXXXXXPLLFIMALIVLGLFTVIGIFYSVLVATMV 60
           M TDC  C E+CGT                 PLLFIM L  L LF V+GIFYSVLVATM+
Sbjct: 211 MSTDCNACCENCGTECCGCTCMRGSEDEAGLPLLFIMVLFFLVLFAVLGIFYSVLVATMI 270

Query: 61  GQRIWQRHYHILAKRMLTKEYVVEDVDGEMTDSDWSPPVLPPEHVQQLKTLGLL 114
           GQRIWQRHYHILAKRMLTKEYVVE++DGE+   +W+PP LP EHV+QLKTLGLL
Sbjct: 271 GQRIWQRHYHILAKRMLTKEYVVENIDGEIAGPNWTPPPLPQEHVRQLKTLGLL 324


>Glyma05g08220.2 
          Length = 309

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 45/67 (67%), Gaps = 5/67 (7%)

Query: 48  IGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTDSDWSPPVLPPEHVQQ 107
           +GI Y  L ATM  QRIWQRHYHIL KR LTKEY+VED+ G      + PP L PEH  +
Sbjct: 248 LGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLGG-----CYFPPKLDPEHEGR 302

Query: 108 LKTLGLL 114
           LK L LL
Sbjct: 303 LKMLKLL 309


>Glyma05g08220.1 
          Length = 309

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 45/67 (67%), Gaps = 5/67 (7%)

Query: 48  IGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTDSDWSPPVLPPEHVQQ 107
           +GI Y  L ATM  QRIWQRHYHIL KR LTKEY+VED+ G      + PP L PEH  +
Sbjct: 248 LGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLGG-----CYFPPKLDPEHEGR 302

Query: 108 LKTLGLL 114
           LK L LL
Sbjct: 303 LKMLKLL 309


>Glyma17g12750.4 
          Length = 311

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 45/67 (67%), Gaps = 5/67 (7%)

Query: 48  IGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTDSDWSPPVLPPEHVQQ 107
           +GI Y  L ATM  QRIWQRHYHIL KR LTKEY+VED+ G      + PP L PEH  +
Sbjct: 250 LGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLGG-----CYFPPKLDPEHEGR 304

Query: 108 LKTLGLL 114
           LK L LL
Sbjct: 305 LKMLKLL 311


>Glyma17g12750.3 
          Length = 311

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 45/67 (67%), Gaps = 5/67 (7%)

Query: 48  IGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTDSDWSPPVLPPEHVQQ 107
           +GI Y  L ATM  QRIWQRHYHIL KR LTKEY+VED+ G      + PP L PEH  +
Sbjct: 250 LGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLGG-----CYFPPKLDPEHEGR 304

Query: 108 LKTLGLL 114
           LK L LL
Sbjct: 305 LKMLKLL 311


>Glyma17g12750.2 
          Length = 311

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 45/67 (67%), Gaps = 5/67 (7%)

Query: 48  IGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTDSDWSPPVLPPEHVQQ 107
           +GI Y  L ATM  QRIWQRHYHIL KR LTKEY+VED+ G      + PP L PEH  +
Sbjct: 250 LGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLGG-----CYFPPKLDPEHEGR 304

Query: 108 LKTLGLL 114
           LK L LL
Sbjct: 305 LKMLKLL 311


>Glyma17g12750.1 
          Length = 311

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 45/67 (67%), Gaps = 5/67 (7%)

Query: 48  IGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTDSDWSPPVLPPEHVQQ 107
           +GI Y  L ATM  QRIWQRHYHIL KR LTKEY+VED+ G      + PP L PEH  +
Sbjct: 250 LGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLGG-----CYFPPKLDPEHEGR 304

Query: 108 LKTLGLL 114
           LK L LL
Sbjct: 305 LKMLKLL 311


>Glyma13g45010.1 
          Length = 259

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 8/80 (10%)

Query: 34  LFIMALIVLGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTDS 93
            + MA++ + L   +G+ Y   +A + GQRI +RHYH+LAK+ LTKEYVVED      + 
Sbjct: 187 FYTMAVLAIVL---VGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVED-----REH 238

Query: 94  DWSPPVLPPEHVQQLKTLGL 113
             + P L P HV +L+ LGL
Sbjct: 239 VKNVPELDPSHVTELRMLGL 258


>Glyma15g00320.3 
          Length = 256

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 8/80 (10%)

Query: 34  LFIMALIVLGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTDS 93
            + MA++ +    ++G+ Y   +A + GQRI +RHYH+LAK+ LTKEYVVED      + 
Sbjct: 184 FYTMAVLAI---VLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVED-----REH 235

Query: 94  DWSPPVLPPEHVQQLKTLGL 113
             + P L P HV +L+ LGL
Sbjct: 236 VKNVPELDPSHVTELRMLGL 255


>Glyma15g00320.2 
          Length = 257

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 8/80 (10%)

Query: 34  LFIMALIVLGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTDS 93
            + MA++ +    ++G+ Y   +A + GQRI +RHYH+LAK+ LTKEYVVED      + 
Sbjct: 185 FYTMAVLAI---VLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVED-----REH 236

Query: 94  DWSPPVLPPEHVQQLKTLGL 113
             + P L P HV +L+ LGL
Sbjct: 237 VKNVPELDPSHVTELRMLGL 256


>Glyma15g00320.1 
          Length = 257

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 8/80 (10%)

Query: 34  LFIMALIVLGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTDS 93
            + MA++ +    ++G+ Y   +A + GQRI +RHYH+LAK+ LTKEYVVED      + 
Sbjct: 185 FYTMAVLAI---VLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVED-----REH 236

Query: 94  DWSPPVLPPEHVQQLKTLGL 113
             + P L P HV +L+ LGL
Sbjct: 237 VKNVPELDPSHVTELRMLGL 256