Miyakogusa Predicted Gene

Lj0g3v0016699.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0016699.1 Non Chatacterized Hit- tr|I1N1V7|I1N1V7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=3,92.86,0.0000000000004, ,1995_g.1
         (65 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g02890.1                                                        97   3e-21
Glyma18g29560.1                                                        95   2e-20
Glyma02g04700.1                                                        93   6e-20

>Glyma01g02890.1 
          Length = 1299

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/65 (75%), Positives = 51/65 (78%)

Query: 1    MSLEEMKQVFXXXXXXXXXXXXXRTADGTRARYSRLYRTLATKVPSLRDLVSELEKGGAL 60
            MSLEEMKQVF             RTADGTRARYSRLYRTLA KVPSL+D+VSELEKGGAL
Sbjct: 1235 MSLEEMKQVFAELPEALSLLALARTADGTRARYSRLYRTLAMKVPSLKDMVSELEKGGAL 1294

Query: 61   KDVRT 65
            KDVRT
Sbjct: 1295 KDVRT 1299


>Glyma18g29560.1 
          Length = 1212

 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 49/65 (75%), Positives = 50/65 (76%)

Query: 1    MSLEEMKQVFXXXXXXXXXXXXXRTADGTRARYSRLYRTLATKVPSLRDLVSELEKGGAL 60
            MSLEEMKQVF             RTADGTRARYSRLYRTLATKVPSL+DLV ELEK GAL
Sbjct: 1148 MSLEEMKQVFNELPEALSLLALARTADGTRARYSRLYRTLATKVPSLKDLVGELEKVGAL 1207

Query: 61   KDVRT 65
            KDVRT
Sbjct: 1208 KDVRT 1212


>Glyma02g04700.1 
          Length = 1358

 Score = 93.2 bits (230), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 48/65 (73%), Positives = 50/65 (76%)

Query: 1    MSLEEMKQVFXXXXXXXXXXXXXRTADGTRARYSRLYRTLATKVPSLRDLVSELEKGGAL 60
            MSLEEMKQVF             RTADGTRARYSRLYRTLA KV SL+D+VSELEKGGAL
Sbjct: 1294 MSLEEMKQVFAELPEALSLLALARTADGTRARYSRLYRTLAMKVTSLKDMVSELEKGGAL 1353

Query: 61   KDVRT 65
            KDVRT
Sbjct: 1354 KDVRT 1358