Miyakogusa Predicted Gene

Lj0g3v0013779.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0013779.1 Non Chatacterized Hit- tr|I3S6Y1|I3S6Y1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,100,0.000000000000009,no
description,NULL,NODE_41960_length_159_cov_729.698120.path2.1
         (41 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g43290.2                                                        65   2e-11
Glyma08g46500.2                                                        64   3e-11
Glyma08g43290.1                                                        64   3e-11
Glyma18g35450.1                                                        63   7e-11
Glyma08g46500.1                                                        55   2e-08

>Glyma08g43290.2 
          Length = 86

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/38 (89%), Positives = 35/38 (92%), Gaps = 2/38 (5%)

Query: 5  GGVTNN-EEDKKPTDQGGAHINLKVKGQDGNEVFFRIK 41
           GVTNN EEDKKPT+QG AHINLKVKGQDGNEVFFRIK
Sbjct: 2  SGVTNNNEEDKKPTEQG-AHINLKVKGQDGNEVFFRIK 38


>Glyma08g46500.2 
          Length = 103

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/41 (78%), Positives = 36/41 (87%), Gaps = 1/41 (2%)

Query: 1  MSSGGGVTNNEEDKKPTDQGGAHINLKVKGQDGNEVFFRIK 41
          MS+ GG  + EE+KKP+DQG AHINLKVKGQDGNEVFFRIK
Sbjct: 1  MSASGGRGSQEEEKKPSDQG-AHINLKVKGQDGNEVFFRIK 40


>Glyma08g43290.1 
          Length = 99

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/38 (89%), Positives = 35/38 (92%), Gaps = 2/38 (5%)

Query: 5  GGVTNN-EEDKKPTDQGGAHINLKVKGQDGNEVFFRIK 41
           GVTNN EEDKKPT+QG AHINLKVKGQDGNEVFFRIK
Sbjct: 2  SGVTNNNEEDKKPTEQG-AHINLKVKGQDGNEVFFRIK 38


>Glyma18g35450.1 
          Length = 114

 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 32/41 (78%), Positives = 35/41 (85%), Gaps = 1/41 (2%)

Query: 1  MSSGGGVTNNEEDKKPTDQGGAHINLKVKGQDGNEVFFRIK 41
          MS  GG  + EE+KKP+DQG AHINLKVKGQDGNEVFFRIK
Sbjct: 1  MSVSGGRGSQEEEKKPSDQG-AHINLKVKGQDGNEVFFRIK 40


>Glyma08g46500.1 
          Length = 117

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/55 (58%), Positives = 36/55 (65%), Gaps = 15/55 (27%)

Query: 1  MSSGGGVTNNEEDKKPTDQGGAHINLKVKGQ--------------DGNEVFFRIK 41
          MS+ GG  + EE+KKP+DQG AHINLKVKGQ              DGNEVFFRIK
Sbjct: 1  MSASGGRGSQEEEKKPSDQG-AHINLKVKGQVSILYSPFPLLNFMDGNEVFFRIK 54