Miyakogusa Predicted Gene

Lj0g3v0012039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0012039.1 tr|B9H4T7|B9H4T7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_558531 PE=4 SV=1,41.67,0.00001,
,CUFF.611.1
         (175 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g38100.1                                                       271   3e-73
Glyma18g02030.1                                                       269   1e-72
Glyma18g02030.2                                                       268   2e-72

>Glyma11g38100.1 
          Length = 246

 Score =  271 bits (693), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 132/172 (76%), Positives = 148/172 (86%), Gaps = 7/172 (4%)

Query: 1   MLPEGDESANCALPLAFLSILEVPNQAKSSMCLDDQINCQNCIDVQMESSDVYSQCVIDI 60
           +LPE +E+ANCA PLAFLSILEVPNQ K++MCLD  INCQNCID QM++ DVYSQC++DI
Sbjct: 73  VLPEENENANCASPLAFLSILEVPNQVKNTMCLDAHINCQNCIDFQMKNEDVYSQCIVDI 132

Query: 61  PSVNGNPVSPESFEEGVESFKTGNSPTSVLWRESSLKVGAKLMQSLSNLSNQREPSKLTD 120
           PSVNGN VSPES+EE VESFKTGNSPTSVLWRESS K G KLMQSL N+ N R      D
Sbjct: 133 PSVNGNSVSPESYEEAVESFKTGNSPTSVLWRESSFK-GGKLMQSLVNVGNPR------D 185

Query: 121 KPVTEKVHDMPINKWRRYKRSASFDSRKVALLFSILSSLGTLVLIYLTLRVR 172
           K V+EK+HD+P N+WRRYKR+ASFDSRKVALLFSILSS GTLVLIYLTLRVR
Sbjct: 186 KAVSEKLHDLPSNRWRRYKRAASFDSRKVALLFSILSSFGTLVLIYLTLRVR 237


>Glyma18g02030.1 
          Length = 251

 Score =  269 bits (687), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 133/172 (77%), Positives = 146/172 (84%), Gaps = 7/172 (4%)

Query: 1   MLPEGDESANCALPLAFLSILEVPNQAKSSMCLDDQINCQNCIDVQMESSDVYSQCVIDI 60
           +LPE DE+ANCA PL FLSIL VPNQ KS MCLDD INCQNCID QM++  VYSQC+IDI
Sbjct: 78  VLPEEDENANCASPLPFLSILGVPNQVKSPMCLDDPINCQNCIDFQMKNEGVYSQCIIDI 137

Query: 61  PSVNGNPVSPESFEEGVESFKTGNSPTSVLWRESSLKVGAKLMQSLSNLSNQREPSKLTD 120
           PSVNGN VSPES+EE VE FKTGNSPTSVLWRESS K G KLMQSL N+SN R      D
Sbjct: 138 PSVNGNSVSPESYEEAVEGFKTGNSPTSVLWRESSFKAG-KLMQSLVNVSNPR------D 190

Query: 121 KPVTEKVHDMPINKWRRYKRSASFDSRKVALLFSILSSLGTLVLIYLTLRVR 172
           KPV+EK+HD+P N+WR+YKR+ASFDSRKVALLFSILSS GTLVLIYLTLRVR
Sbjct: 191 KPVSEKLHDLPSNRWRKYKRAASFDSRKVALLFSILSSFGTLVLIYLTLRVR 242


>Glyma18g02030.2 
          Length = 246

 Score =  268 bits (686), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 133/172 (77%), Positives = 146/172 (84%), Gaps = 7/172 (4%)

Query: 1   MLPEGDESANCALPLAFLSILEVPNQAKSSMCLDDQINCQNCIDVQMESSDVYSQCVIDI 60
           +LPE DE+ANCA PL FLSIL VPNQ KS MCLDD INCQNCID QM++  VYSQC+IDI
Sbjct: 73  VLPEEDENANCASPLPFLSILGVPNQVKSPMCLDDPINCQNCIDFQMKNEGVYSQCIIDI 132

Query: 61  PSVNGNPVSPESFEEGVESFKTGNSPTSVLWRESSLKVGAKLMQSLSNLSNQREPSKLTD 120
           PSVNGN VSPES+EE VE FKTGNSPTSVLWRESS K G KLMQSL N+SN R      D
Sbjct: 133 PSVNGNSVSPESYEEAVEGFKTGNSPTSVLWRESSFKAG-KLMQSLVNVSNPR------D 185

Query: 121 KPVTEKVHDMPINKWRRYKRSASFDSRKVALLFSILSSLGTLVLIYLTLRVR 172
           KPV+EK+HD+P N+WR+YKR+ASFDSRKVALLFSILSS GTLVLIYLTLRVR
Sbjct: 186 KPVSEKLHDLPSNRWRKYKRAASFDSRKVALLFSILSSFGTLVLIYLTLRVR 237