Miyakogusa Predicted Gene

Lj0g3v0010119.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0010119.1 Non Chatacterized Hit- tr|I1N861|I1N861_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,65.22,0.000001,
,gene.g903.t1.1
         (155 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g08140.1                                                       285   9e-78
Glyma02g36540.1                                                       283   6e-77
Glyma19g28510.1                                                        58   5e-09

>Glyma17g08140.1 
          Length = 310

 Score =  285 bits (730), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 138/153 (90%), Positives = 141/153 (92%), Gaps = 2/153 (1%)

Query: 1   MDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM 60
           MDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM
Sbjct: 144 MDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM 203

Query: 61  RDAWPSSRVRKNVSLIRTYHGFKGEKQGTLEYLKLIFRALCLCWDRQTQDLHIDWIFFRG 120
           RDAWPS+RVRKNVSLIRTYHGFKG+KQGTLE+LKLIFRALCLCWDRQTQDLHIDWI FRG
Sbjct: 204 RDAWPSARVRKNVSLIRTYHGFKGDKQGTLEFLKLIFRALCLCWDRQTQDLHIDWILFRG 263

Query: 121 RSLIPVSCEVVNDNIDG--TPKHKTIIPHFMHP 151
           RSLIPVSCEVVNDNIDG     H  I   FM P
Sbjct: 264 RSLIPVSCEVVNDNIDGYYPSSHFPIFAEFMLP 296


>Glyma02g36540.1 
          Length = 310

 Score =  283 bits (723), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 137/153 (89%), Positives = 140/153 (91%), Gaps = 2/153 (1%)

Query: 1   MDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM 60
           MDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM
Sbjct: 144 MDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM 203

Query: 61  RDAWPSSRVRKNVSLIRTYHGFKGEKQGTLEYLKLIFRALCLCWDRQTQDLHIDWIFFRG 120
           RDAWPS+RVRKNVSLI TYHGFKG+KQGTLE+LKLIFRALCLCWDRQTQDLHIDWI FRG
Sbjct: 204 RDAWPSARVRKNVSLIHTYHGFKGDKQGTLEFLKLIFRALCLCWDRQTQDLHIDWILFRG 263

Query: 121 RSLIPVSCEVVNDNIDG--TPKHKTIIPHFMHP 151
           RSLIPVSCEVVNDNIDG     H  I   FM P
Sbjct: 264 RSLIPVSCEVVNDNIDGYYPSSHFPIFAEFMLP 296


>Glyma19g28510.1 
          Length = 280

 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/46 (65%), Positives = 33/46 (71%), Gaps = 4/46 (8%)

Query: 53  EHGVVGDMRDAWPSSRVRKNVSLIRTYHGFKG----EKQGTLEYLK 94
           EHGV+G+MRDAW S  VRKNVSLI TYH FK     +KQGTL   K
Sbjct: 183 EHGVIGNMRDAWSSFCVRKNVSLICTYHAFKATFSCDKQGTLNSSK 228