Miyakogusa Predicted Gene

Lj0g3v0010099.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0010099.1 Non Chatacterized Hit- tr|E0CVB7|E0CVB7_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,54.88,3e-17,
,gene.g899.t1.1
         (203 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g12320.1                                                       127   6e-30
Glyma14g24770.1                                                       122   2e-28
Glyma02g30980.1                                                        59   2e-09

>Glyma10g12320.1 
          Length = 538

 Score =  127 bits (320), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 72/132 (54%), Positives = 85/132 (64%), Gaps = 14/132 (10%)

Query: 40  EARERKWSHRCWN-HREL----VGLRRSCFRPMGQLILSFEGWSTPSQPGCWYPVGLAQM 94
           E +  KW+    N  REL    VG   S F+       S     T  + GCWYPVGLAQM
Sbjct: 332 EKQITKWTKLLLNSERELRERLVGFSFSAFQT------SMSNPETNFKSGCWYPVGLAQM 385

Query: 95  EKWIALDQEHVREQVKFIASNVTHEKRFVTCG--YSAVEPCSYCSASVLFESPEFGFCQG 152
           E+WIALDQEH+ +Q+K IAS   HEKR   CG   S++E CS+CSASV FESPEFGFCQG
Sbjct: 386 EQWIALDQEHIHDQLKVIASEAKHEKRITRCGDTQSSLETCSFCSASVPFESPEFGFCQG 445

Query: 153 ENCSSGNVKRHR 164
           EN S+G+VK HR
Sbjct: 446 EN-STGDVKNHR 456


>Glyma14g24770.1 
          Length = 377

 Score =  122 bits (307), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/123 (54%), Positives = 79/123 (64%), Gaps = 20/123 (16%)

Query: 56  LVGLRRSCFRPMGQLILSFEGWSTPSQPGCWYPVGLAQMEKWIALDQEHVREQVKFIASN 115
           LVG   S FR       S     T S+ GCWYPVGLAQME+WIALDQEH+ +Q+K IAS 
Sbjct: 179 LVGFSFSAFRT------SMSNPETNSKSGCWYPVGLAQMEQWIALDQEHIHDQLKAIASE 232

Query: 116 V--------------THEKRFVTCGYSAVEPCSYCSASVLFESPEFGFCQGENCSSGNVK 161
           V                E++F++   SAVE CS+CSASV FESPEFGFCQGEN +SG+VK
Sbjct: 233 VEIHNLVVLWNPPTIKLERKFLSSRCSAVETCSFCSASVPFESPEFGFCQGENSTSGDVK 292

Query: 162 RHR 164
            HR
Sbjct: 293 NHR 295


>Glyma02g30980.1 
          Length = 298

 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/58 (51%), Positives = 35/58 (60%), Gaps = 6/58 (10%)

Query: 56  LVGLRRSCFRPMGQLILSFEGWSTPSQPGCWYPVGLAQMEKWIALDQEHVREQVKFIA 113
           LVG   S FR       S        + GCWYPVGLAQME+ I LDQEH+R+Q+K IA
Sbjct: 245 LVGFSFSAFRT------SMSNQEANPKSGCWYPVGLAQMEQLIGLDQEHLRDQLKVIA 296