Miyakogusa Predicted Gene
- Lj0g3v0009329.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0009329.1 Non Chatacterized Hit- tr|B9RHA6|B9RHA6_RICCO
Vacuolar proton atpase, putative OS=Ricinus communis
G,55.71,0.000000000000002,V_ATPase_I,ATPase, V0/A0 complex subunit a;
coiled-coil,NULL; VACUOLAR PROTON ATPASE,NULL; VACUOLAR
,gene.g823.t1.1
(422 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma15g04970.1 329 4e-90
Glyma13g40430.1 326 4e-89
Glyma12g07740.1 306 3e-83
Glyma11g15730.1 305 6e-83
Glyma12g04330.1 194 1e-49
Glyma11g12120.1 189 4e-48
Glyma06g03040.1 168 1e-41
Glyma09g24230.1 98 1e-20
Glyma04g03010.1 77 4e-14
Glyma15g20590.1 67 5e-11
Glyma06g24030.1 62 1e-09
Glyma03g37220.1 61 2e-09
>Glyma15g04970.1
Length = 819
Score = 329 bits (843), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 160/178 (89%), Positives = 169/178 (94%)
Query: 1 MDQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNAEKSPFQRTF 60
M+QFIDNLPPMDLMRSEKMTFVQLIIP ESAHRAISYLGELGLLQFRDLNA+KSPFQRTF
Sbjct: 1 MEQFIDNLPPMDLMRSEKMTFVQLIIPVESAHRAISYLGELGLLQFRDLNADKSPFQRTF 60
Query: 61 VNQVKRCAEMSRKLRFFKDQINKAGLISSTRIVLQRDIDLEDLEVQLAEHEHELIEMNSN 120
VNQVKRCAEMSRKLRFFKDQI+KAGL+SS+R VLQ DIDLEDLE+QLAEHEHELIEMNSN
Sbjct: 61 VNQVKRCAEMSRKLRFFKDQISKAGLMSSSRTVLQPDIDLEDLEIQLAEHEHELIEMNSN 120
Query: 121 SDKLRQSYNELLEFKIVLQKACGFLVSSNGHAVSDERELQENIYSNDDYVETASLLEQ 178
SDKL+QSYNEL EFKIVLQKACGFLVS + AVSDERELQEN+YSND YVET SLLEQ
Sbjct: 121 SDKLQQSYNELQEFKIVLQKACGFLVSKHSLAVSDERELQENVYSNDAYVETGSLLEQ 178
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 64/70 (91%), Positives = 68/70 (97%)
Query: 177 EQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLDAGIRHRNKALASI 236
EQARTKILKICEAFGANCYPVPEDISKQR+ITREVSSRLTDLEATL+AGIRHRNKALAS+
Sbjct: 249 EQARTKILKICEAFGANCYPVPEDISKQREITREVSSRLTDLEATLEAGIRHRNKALASV 308
Query: 237 TDHLANWMNM 246
DHLA W+NM
Sbjct: 309 ADHLAKWINM 318
>Glyma13g40430.1
Length = 820
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 158/178 (88%), Positives = 168/178 (94%)
Query: 1 MDQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNAEKSPFQRTF 60
M+QFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNA+KSPFQRTF
Sbjct: 1 MEQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNADKSPFQRTF 60
Query: 61 VNQVKRCAEMSRKLRFFKDQINKAGLISSTRIVLQRDIDLEDLEVQLAEHEHELIEMNSN 120
VNQVKRC EMSRKLRFFKDQI+KAGL+SS+R LQ DIDLEDLE+QLAEHEHELIEMNSN
Sbjct: 61 VNQVKRCGEMSRKLRFFKDQISKAGLMSSSRTELQPDIDLEDLEIQLAEHEHELIEMNSN 120
Query: 121 SDKLRQSYNELLEFKIVLQKACGFLVSSNGHAVSDERELQENIYSNDDYVETASLLEQ 178
SDKLRQSYNELLEFKIVLQKACGFLVS++ V DEREL+EN+YSND YVET SLLEQ
Sbjct: 121 SDKLRQSYNELLEFKIVLQKACGFLVSNHSRVVLDERELRENVYSNDAYVETVSLLEQ 178
>Glyma12g07740.1
Length = 818
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/178 (84%), Positives = 163/178 (91%), Gaps = 1/178 (0%)
Query: 1 MDQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNAEKSPFQRTF 60
MD+F NLPPMDLMRSE MTFVQLIIPAESAHRAI+YLGELGLLQFRDLNAEKSPFQR F
Sbjct: 1 MDRFFGNLPPMDLMRSETMTFVQLIIPAESAHRAINYLGELGLLQFRDLNAEKSPFQRIF 60
Query: 61 VNQVKRCAEMSRKLRFFKDQINKAGLISSTRIVLQRDIDLEDLEVQLAEHEHELIEMNSN 120
VNQVKRCAEMSRKLRFF+DQINKAGL+SS VLQ DI LEDLE+QLAEHEHELIEMNSN
Sbjct: 61 VNQVKRCAEMSRKLRFFEDQINKAGLMSSPS-VLQTDIYLEDLEIQLAEHEHELIEMNSN 119
Query: 121 SDKLRQSYNELLEFKIVLQKACGFLVSSNGHAVSDERELQENIYSNDDYVETASLLEQ 178
S+KLRQSYNELLEFKIVLQKAC FLVSS+G+A S+EREL+EN++SN DY+ET L EQ
Sbjct: 120 SEKLRQSYNELLEFKIVLQKACRFLVSSHGNAFSEERELEENVFSNGDYIETPFLFEQ 177
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/70 (87%), Positives = 64/70 (91%)
Query: 177 EQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLDAGIRHRNKALASI 236
EQARTKILKIC+AFGANCYPVPEDISKQRQIT EVSSRL DLEATLDAGIRHRNKALAS+
Sbjct: 248 EQARTKILKICDAFGANCYPVPEDISKQRQITSEVSSRLADLEATLDAGIRHRNKALASV 307
Query: 237 TDHLANWMNM 246
HL WM+M
Sbjct: 308 GGHLTKWMDM 317
>Glyma11g15730.1
Length = 818
Score = 305 bits (781), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 150/178 (84%), Positives = 163/178 (91%), Gaps = 1/178 (0%)
Query: 1 MDQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNAEKSPFQRTF 60
M +FI+NLPPMDLMRSE MTFVQLIIPAESAHRAI+YLGELGLLQFRDLNAEKSPFQRTF
Sbjct: 1 MVRFIENLPPMDLMRSEAMTFVQLIIPAESAHRAITYLGELGLLQFRDLNAEKSPFQRTF 60
Query: 61 VNQVKRCAEMSRKLRFFKDQINKAGLISSTRIVLQRDIDLEDLEVQLAEHEHELIEMNSN 120
VNQVKRCAEMSRKLRFFKDQINKAGL+SS VLQ DI LEDLE+QLAEHEHELIEMNSN
Sbjct: 61 VNQVKRCAEMSRKLRFFKDQINKAGLMSSPS-VLQSDIYLEDLEIQLAEHEHELIEMNSN 119
Query: 121 SDKLRQSYNELLEFKIVLQKACGFLVSSNGHAVSDERELQENIYSNDDYVETASLLEQ 178
S+KL+QSYNELLEFKIVLQKAC FLVSS G+A S+E EL+EN++SN DY+ET L EQ
Sbjct: 120 SEKLQQSYNELLEFKIVLQKACRFLVSSRGNACSEETELEENVFSNGDYIETPFLFEQ 177
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/70 (82%), Positives = 62/70 (88%)
Query: 177 EQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLDAGIRHRNKALASI 236
EQARTKILKIC+AFGANCYPVPED +KQRQIT EVSSRL DLEATLDAGIR RNKALAS+
Sbjct: 248 EQARTKILKICDAFGANCYPVPEDTNKQRQITSEVSSRLADLEATLDAGIRLRNKALASV 307
Query: 237 TDHLANWMNM 246
HL WM+M
Sbjct: 308 GGHLTKWMDM 317
>Glyma12g04330.1
Length = 818
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/170 (57%), Positives = 128/170 (75%), Gaps = 2/170 (1%)
Query: 9 PPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNAEKSPFQRTFVNQVKRCA 68
PPMDL RSE M VQLIIP ESAHR +SYLG+LGLLQF+DLNA+KSPFQRT+ Q+KRC
Sbjct: 11 PPMDLFRSEPMQLVQLIIPIESAHRTVSYLGDLGLLQFKDLNADKSPFQRTYAAQIKRCG 70
Query: 69 EMSRKLRFFKDQINKAGLISSTRIVLQRDIDLEDLEVQLAEHEHELIEMNSNSDKLRQSY 128
EM+R LRFFKDQ+ KAG +S D++++DLEV+L E E EL EMN+N +KL++SY
Sbjct: 71 EMARGLRFFKDQMLKAG-VSPKYSTTPVDLNIDDLEVKLTEIESELTEMNANGEKLQRSY 129
Query: 129 NELLEFKIVLQKACGFLVSSNGHAVSDERELQENIYSNDDYVETASLLEQ 178
NEL+E+K+VLQKA F S+ A+ +RE QE+ + + + +ET L +Q
Sbjct: 130 NELVEYKLVLQKAGEFFHSAQSRALEQQRE-QESCHLSGESMETPLLQDQ 178
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 177 EQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLDAGIRHRNKALASI 236
E+A+ KILKICEAFGAN YP E++ KQ Q+ EVS RL +L+ T+DAG+ HR+ L +I
Sbjct: 249 EKAKAKILKICEAFGANRYPFAEELGKQAQMITEVSGRLLELKTTIDAGLLHRDNLLNTI 308
Query: 237 TDHLANW 243
W
Sbjct: 309 GAQFEQW 315
>Glyma11g12120.1
Length = 818
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 148/219 (67%), Gaps = 8/219 (3%)
Query: 9 PPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNAEKSPFQRTFVNQVKRCA 68
PPMDL RSE M VQLIIP ESAHR +SYLG+LGLLQF+DLNA+KSPFQRT+ Q++R
Sbjct: 11 PPMDLFRSEPMQLVQLIIPIESAHRTVSYLGDLGLLQFKDLNADKSPFQRTYAAQIRRSG 70
Query: 69 EMSRKLRFFKDQINKAGLISSTRIVLQRDIDLEDLEVQLAEHEHELIEMNSNSDKLRQSY 128
EM+R+LRFFK+Q+ KAG +S D++++DLEV+L E E EL EMN+N +KL++SY
Sbjct: 71 EMARRLRFFKEQMLKAG-VSPKYSTTPVDVNIDDLEVKLTEIESELTEMNANGEKLQRSY 129
Query: 129 NELLEFKIVLQKACGFLVSSNGHAVSDERELQENIYSNDDYVETASLLEQA----RTKIL 184
NEL+E+K+VLQKA F S+ A+ +RE QE+ + + + +ET L +Q +K +
Sbjct: 130 NELVEYKLVLQKAGEFFHSAQSRALEQQRE-QESCHLSGESIETPLLQDQELSVDSSKQV 188
Query: 185 KICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLD 223
K+ F A P + + +R + R + +AT++
Sbjct: 189 KL--GFLAGLVPREKSMVFERILFRATRGNVFLRQATVE 225
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 46/67 (68%)
Query: 177 EQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLDAGIRHRNKALASI 236
E+A+ KILKICEAFGAN YP E++ KQ Q+ EVS RL +L+ TLDAG+ HRN L +I
Sbjct: 249 EKAKAKILKICEAFGANRYPFAEELGKQAQMITEVSGRLLELKTTLDAGLLHRNNLLNTI 308
Query: 237 TDHLANW 243
W
Sbjct: 309 GAQFEQW 315
>Glyma06g03040.1
Length = 815
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 140/202 (69%), Gaps = 1/202 (0%)
Query: 8 LPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNAEKSPFQRTFVNQVKRC 67
LP MDL+RSE M VQLIIP ESAHR+ISYLG+LGL+QF+DLNA+KSPFQRT+ +Q+KRC
Sbjct: 8 LPTMDLLRSEPMQLVQLIIPIESAHRSISYLGDLGLIQFKDLNADKSPFQRTYASQIKRC 67
Query: 68 AEMSRKLRFFKDQINKAGLISSTRIVLQRDIDLEDLEVQLAEHEHELIEMNSNSDKLRQS 127
EM+R+LR FK+Q+ KAG+ ST DLE LEV+L E E EL+E+N+N++KL+ +
Sbjct: 68 GEMARRLRLFKEQMTKAGVSPSTWSTRDNHFDLEHLEVKLEELEAELLEINANNEKLQHT 127
Query: 128 YNELLEFKIVLQKACGFLVSSNGHAVSDERELQENIYSNDDYVETASLLEQARTKILKIC 187
YNELLE+K+VL+K F S+ AV+ ++EL+ + + +++ LLEQ T +I
Sbjct: 128 YNELLEYKLVLEKVGEFFSSAKNKAVAQQKELEFQT-TVEGSIDSPLLLEQEETTTKQIK 186
Query: 188 EAFGANCYPVPEDISKQRQITR 209
F + + I +R I R
Sbjct: 187 LRFISGLVHREKSIPFERIIFR 208
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 177 EQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLDAGIRHRNKALASI 236
E+ ++KILKIC+AFGAN YP +D+SKQ Q REVS RL++L+ T+DAG+ HR+ L +I
Sbjct: 246 ERVKSKILKICDAFGANRYPFSDDLSKQFQTIREVSGRLSELKTTIDAGLIHRSTLLQTI 305
Query: 237 TDHLANW 243
H W
Sbjct: 306 GYHYEQW 312
>Glyma09g24230.1
Length = 221
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 48/54 (88%)
Query: 1 MDQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNAEKS 54
M+QFIDNLPPMDLMRSEKMTFVQLIIP ES HRAISYLG+L LLQFRD+ KS
Sbjct: 1 MEQFIDNLPPMDLMRSEKMTFVQLIIPVESTHRAISYLGKLDLLQFRDVYVNKS 54
>Glyma04g03010.1
Length = 829
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 177 EQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLDAGIRHRNKALASI 236
E+ ++KILKIC+AFGAN Y D SKQ Q REVS R+++L+AT+DA + HR+ L +I
Sbjct: 217 ERVKSKILKICDAFGANRYAFSNDSSKQFQTIREVSGRISELKATIDAALIHRSTLLQTI 276
Query: 237 TDHLANW---MNMELVIMVLSMEEW 258
H W +N+ + L E W
Sbjct: 277 GYHHGQWRLLLNINVTKKCLLAEGW 301
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 88/152 (57%), Gaps = 1/152 (0%)
Query: 64 VKRCAEMSRKLRFFKDQINKAGLISSTRIVLQRDIDLEDLEVQLAEHEHELIEMNSNSDK 123
+KRC EM+R+LR FK+Q+ KAG+ S DLE LEV+L E E EL+E+N+N++K
Sbjct: 35 IKRCGEMARRLRLFKEQMTKAGVSPSMWSTRDDHFDLEHLEVKLEELEAELLEINANNEK 94
Query: 124 LRQSYNELLEFKIVLQKACGFLVSSNGHAVSDERELQENIYSNDDYVETASLLEQARTKI 183
L+ +YNELLE+K+VL+K S+ AV+ ++EL+ + + +++ LLEQ T
Sbjct: 95 LQHTYNELLEYKLVLEKVGELFSSAKNKAVAHQKELEFQT-TVEGSIDSPLLLEQEETTT 153
Query: 184 LKICEAFGANCYPVPEDISKQRQITREVSSRL 215
+I F + I +R I R L
Sbjct: 154 KQIKLGFIGGLVHREKSIPFERIIFRAARGNL 185
>Glyma15g20590.1
Length = 178
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 38/54 (70%)
Query: 2 DQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNAEKSP 55
D F++ P +MTFVQLIIP ESAHRAISYLGELGLLQFRD++ P
Sbjct: 98 DDFLNRNPKDPSYFKVRMTFVQLIIPVESAHRAISYLGELGLLQFRDVSFLSDP 151
>Glyma06g24030.1
Length = 108
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 MDQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRA-ISYLGELGLLQFRDLNAEKSPFQRT 59
M+QFIDNLPPMDLMRSEKMTFVQLIIP E + I GE L+ + + + F+
Sbjct: 1 MEQFIDNLPPMDLMRSEKMTFVQLIIPIERTQPSPIPRCGEDCKLRLWSIKSGELLFEDK 60
Query: 60 FVNQV 64
F + V
Sbjct: 61 FSDSV 65
>Glyma03g37220.1
Length = 405
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 58/82 (70%), Gaps = 11/82 (13%)
Query: 70 MSRKLRFFKDQINKAGL---ISSTRIVLQRDIDLEDLEVQLAEHEHELIEMNSNSDKLRQ 126
M+R+LRFFK+Q+ KAG+ S+T I D++++++EV+L E E EL EMN+N +KL++
Sbjct: 1 MARRLRFFKEQMLKAGVSPKYSTTPI----DVNIDEIEVKLTEIELELTEMNANGEKLQR 56
Query: 127 SYNELL---EFKIVLQKACGFL 145
SY+EL+ +F + + CG L
Sbjct: 57 SYDELVYQTQFIFICLR-CGLL 77