Miyakogusa Predicted Gene

Lj0g3v0006579.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0006579.1 tr|B9MXZ2|B9MXZ2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_594476 PE=4
SV=1,34.97,3e-18,SANTA,SANT associated; seg,NULL,CUFF.372.1
         (876 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g19350.1                                                       257   3e-68
Glyma10g05000.1                                                       243   5e-64
Glyma09g00520.1                                                        67   7e-11

>Glyma13g19350.1 
          Length = 246

 Score =  257 bits (657), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 136/241 (56%), Positives = 165/241 (68%), Gaps = 29/241 (12%)

Query: 22  SSSFQRTVCLYDWWLIQAKNDFHGKRLAVAGVSSKKDEAMRVFVSAPIIKRYDVFSLETA 81
           SSSF+RTV LYDWWL+ AKNDF GKRLAVAGVSS+KDEA RVFVSA +IKRYDVFSLETA
Sbjct: 16  SSSFRRTVTLYDWWLVIAKNDFQGKRLAVAGVSSRKDEATRVFVSAAVIKRYDVFSLETA 75

Query: 82  DGVYVIISGFINQERTRENGFAPEVFNSFIFGFPPNWESYAVDCFREESTAASDSGNAAP 141
           DG+ VII GFIN++RT ENGF+ EVF+ F+FGFPP+WE YA+DCF+EE T  +D G+  P
Sbjct: 76  DGICVIIRGFINEQRTLENGFSAEVFHHFLFGFPPDWERYALDCFKEEPTTDADLGSVVP 135

Query: 142 DNVSAIRPEVLSEGNAVPAIVATTRPEISSDDVRKPNPISSMSPEETLGDHEKPFHKDES 201
           DN  A  P++LS+G                  V K  P   +SPEE  GDHE  F ++E 
Sbjct: 136 DNAPASCPKILSDG------------------VEKSIPTCLVSPEEASGDHEMSFPENEC 177

Query: 202 LISKEISGVSGGNRRSARLLSVKVCQKKNQPASGGPLKHLDTEQNSTSVALENCDGVGLK 261
            +SKE+ G          L ++KVCQ+K QPAS     H D E NS+SVALENC+   L+
Sbjct: 178 NVSKEMGG----------LHNIKVCQQKKQPASECLPNHPDNE-NSSSVALENCNVERLE 226

Query: 262 S 262
           S
Sbjct: 227 S 227



 Score = 96.7 bits (239), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 78/166 (46%), Gaps = 42/166 (25%)

Query: 598 LQSYAQGSLSEESTAGIDVSTAAPDNLPAIRLDRLFDDAEKSIPTSLVSPEEAPGDCEQP 657
            + YA     EE T   D+ +  PDN PA     L D  EKSIPT LVSPEEA GD E  
Sbjct: 112 WERYALDCFKEEPTTDADLGSVVPDNAPASCPKILSDGVEKSIPTCLVSPEEASGDHEMS 171

Query: 658 LPEDECNVLREIGGVNVDYGSGGKRHSARLHNIEDESHVSKKIGGDSGGNRHSARLHRVK 717
            PE+ECNV +E+GG                                         LH +K
Sbjct: 172 FPENECNVSKEMGG-----------------------------------------LHNIK 190

Query: 718 VFQQKNQPASDGPLKHPGKEQSSPSVALENSSEDGLKSSVTPIKSQ 763
           V QQK QPAS+    HP  E SS SVALEN + + L+S  TPI+ Q
Sbjct: 191 VCQQKKQPASECLPNHPDNENSS-SVALENCNVERLESPTTPIQPQ 235



 Score = 92.0 bits (227), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 78/166 (46%), Gaps = 53/166 (31%)

Query: 263 YARGHIREEPMAGIDVGTATPDNGIDLGTAAPDNLPAVRLDRLFDDAEKSIPTSLASPEE 322
           YA    +EEP    D+G+  PDN       AP + P +    L D  EKSIPT L SPEE
Sbjct: 115 YALDCFKEEPTTDADLGSVVPDN-------APASCPKI----LSDGVEKSIPTCLVSPEE 163

Query: 323 ALGGCEKPFPEDECNVLTEIGGVKVAYGSGGKRRSARLHNIEDESNVSKKIGGDSGSNRR 382
           A G  E  FPE+ECNV  E+GG                                      
Sbjct: 164 ASGDHEMSFPENECNVSKEMGG-------------------------------------- 185

Query: 383 SARLHRVEVFQQKNQPASDGPLKHPDKEKSSPSVALENCDGKRLKS 428
              LH ++V QQK QPAS+    HPD E SS SVALENC+ +RL+S
Sbjct: 186 ---LHNIKVCQQKKQPASECLPNHPDNENSS-SVALENCNVERLES 227



 Score = 81.6 bits (200), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 79/171 (46%), Gaps = 59/171 (34%)

Query: 430 ARGCLREEPTAGIDVGTSAPDNGIDVGTAAPDNLPAIRMDRLFDDAEKSIPTSVVSPEEA 489
           A  C +EEPT   D+G+  PDN       AP + P I    L D  EKSIPT +      
Sbjct: 116 ALDCFKEEPTTDADLGSVVPDN-------APASCPKI----LSDGVEKSIPTCL------ 158

Query: 490 PGGCEQPLPEDQCNVIAVGKPNPTYSISPDKTLGDHEKQFHKDKSNVSKEMGGASVGCGN 549
                                     +SP++  GDHE  F +++ NVSKEMGG       
Sbjct: 159 --------------------------VSPEEASGDHEMSFPENECNVSKEMGG------- 185

Query: 550 GRNRRSARLHSVKVCQKKNQPASGGPLKHLDKEKNYTSVALENGDGEGLQS 600
                   LH++KVCQ+K QPAS     H D E N +SVALEN + E L+S
Sbjct: 186 --------LHNIKVCQQKKQPASECLPNHPDNE-NSSSVALENCNVERLES 227


>Glyma10g05000.1 
          Length = 181

 Score =  243 bits (621), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 121/188 (64%), Positives = 139/188 (73%), Gaps = 18/188 (9%)

Query: 22  SSSFQRTVCLYDWWLIQAKNDFHGKRLAVAGVSSKKDEAMRVFVSAPIIKRYDVFSLETA 81
           SS FQRTV LYDWWLI+AKNDF GKRLAVAGVSS+KDEAMRVFVSA +IKRYDVFSLETA
Sbjct: 12  SSYFQRTVTLYDWWLIKAKNDFQGKRLAVAGVSSRKDEAMRVFVSAAVIKRYDVFSLETA 71

Query: 82  DGVYVIISGFINQERTRENGFAPEVFNSFIFGFPPNWESYAVDCFREESTAASDSGNAAP 141
           DG+ V+ISGFIN++RT ENGFA EVFN F+FGFPP+WESYA+DCFREEST  +D G+A P
Sbjct: 72  DGICVMISGFINEQRTLENGFAAEVFNRFLFGFPPDWESYALDCFREESTTGTDLGSAVP 131

Query: 142 DNVSAIRPEVLSEGNAVPAIVATTRPEISSDDVRKPNPISSMSPEETLGDHEKPFHKDES 201
           DNV A   E+LS+G                  V    P S  SP+E  GDHEK F  +E 
Sbjct: 132 DNVPASSLEILSDG------------------VENSIPTSLASPKEAPGDHEKSFPGNEC 173

Query: 202 LISKEISG 209
            +SKE+ G
Sbjct: 174 NVSKEMGG 181



 Score = 84.0 bits (206), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 41/74 (55%), Positives = 51/74 (68%)

Query: 598 LQSYAQGSLSEESTAGIDVSTAAPDNLPAIRLDRLFDDAEKSIPTSLVSPEEAPGDCEQP 657
            +SYA     EEST G D+ +A PDN+PA  L+ L D  E SIPTSL SP+EAPGD E+ 
Sbjct: 108 WESYALDCFREESTTGTDLGSAVPDNVPASSLEILSDGVENSIPTSLASPKEAPGDHEKS 167

Query: 658 LPEDECNVLREIGG 671
            P +ECNV +E+GG
Sbjct: 168 FPGNECNVSKEMGG 181



 Score = 73.9 bits (180), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 43/85 (50%), Positives = 50/85 (58%), Gaps = 11/85 (12%)

Query: 260 LKSYARGHIREEPMAGIDVGTATPDNGIDLGTAAPDNLPAVRLDRLFDDAEKSIPTSLAS 319
            +SYA    REE              G DLG+A PDN+PA  L+ L D  E SIPTSLAS
Sbjct: 108 WESYALDCFREEST-----------TGTDLGSAVPDNVPASSLEILSDGVENSIPTSLAS 156

Query: 320 PEEALGGCEKPFPEDECNVLTEIGG 344
           P+EA G  EK FP +ECNV  E+GG
Sbjct: 157 PKEAPGDHEKSFPGNECNVSKEMGG 181



 Score = 66.2 bits (160), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 11/79 (13%)

Query: 426 LKSSARGCLREEPTAGIDVGTSAPDNGIDVGTAAPDNLPAIRMDRLFDDAEKSIPTSVVS 485
            +S A  C REE T            G D+G+A PDN+PA  ++ L D  E SIPTS+ S
Sbjct: 108 WESYALDCFREEST-----------TGTDLGSAVPDNVPASSLEILSDGVENSIPTSLAS 156

Query: 486 PEEAPGGCEQPLPEDQCNV 504
           P+EAPG  E+  P ++CNV
Sbjct: 157 PKEAPGDHEKSFPGNECNV 175


>Glyma09g00520.1 
          Length = 122

 Score = 67.4 bits (163), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 6/99 (6%)

Query: 29  VCLYDWWLIQAKNDFHGKRLAVAGVSSKK-DEAMRVFVSAPIIKRYDVFSLETADGVYVI 87
           + L++WWL++ +     K LAV G++S +  +  RVF+S+ I+ R +   L + DG+ ++
Sbjct: 21  IFLHEWWLVKQR-----KGLAVGGLASVEIADRERVFLSSVIVGREETNVLHSEDGITIL 75

Query: 88  ISGFINQERTRENGFAPEVFNSFIFGFPPNWESYAVDCF 126
             GFIN  R+ +NG   +V   F+ GFP +W+ Y+   F
Sbjct: 76  FRGFINTSRSSQNGVPFQVCQHFLVGFPHDWKKYSAYSF 114