Miyakogusa Predicted Gene

Lj0g3v0005939.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0005939.1 Non Chatacterized Hit- tr|I1NLF8|I1NLF8_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,51.75,7e-18,seg,NULL,CUFF.355.1
         (180 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g03380.1                                                       205   3e-53
Glyma08g14450.2                                                       195   2e-50
Glyma08g14450.1                                                       195   2e-50

>Glyma01g03380.1 
          Length = 177

 Score =  205 bits (521), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 107/160 (66%), Positives = 126/160 (78%), Gaps = 3/160 (1%)

Query: 1   MGKMFDKKKKLAHGHGPPKEDSNMLEQQMDIRSIMKDVQNFSYSHMAWKERKKIENNKVV 60
           MGKM  K +K A GHG P+E+++M EQ+MDIR IMKDV+NFSYSHM+WKERKKIEN  VV
Sbjct: 1   MGKMH-KNRKQAGGHGTPREETDMQEQEMDIRKIMKDVENFSYSHMSWKERKKIENRNVV 59

Query: 61  SLGGKPPKNQRLPLSVARPXXXXXXXXXXXXXXXNMILGRFGGKLGGSNKKSVGKHKPEN 120
           SLGGKP KNQRLPLSVARP                +ILG+FGGKLGGS+K+S GKHKPEN
Sbjct: 60  SLGGKPQKNQRLPLSVARPMMKKQKEREQKMLQERLILGQFGGKLGGSSKRSAGKHKPEN 119

Query: 121 RGLKASEGRFRNGILDVKHLLNSAGPSKNHDTSRTSMFNS 160
           RGLK+SEG FRNGIL+VKHLLNSA PS++ +T  T+M N+
Sbjct: 120 RGLKSSEGHFRNGILNVKHLLNSA-PSRDRETG-TNMSNA 157


>Glyma08g14450.2 
          Length = 184

 Score =  195 bits (496), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 104/160 (65%), Positives = 121/160 (75%), Gaps = 3/160 (1%)

Query: 1   MGKMFDKKKKLAHGHGPPKEDSNMLEQQMDIRSIMKDVQNFSYSHMAWKERKKIENNKVV 60
           MGKM  K KK A GHGPP+E ++  EQ+MDIR IMKDV+NFSYSHM+WKERKKIEN  VV
Sbjct: 1   MGKMC-KNKKQAGGHGPPREQTDTQEQEMDIRKIMKDVENFSYSHMSWKERKKIENRNVV 59

Query: 61  SLGGKPPKNQRLPLSVARPXXXXXXXXXXXXXXXNMILGRFGGKLGGSNKKSVGKHKPEN 120
           SLGGKP KNQRLPLSVAR                 +ILG+FGGKLGGS+K+S GKHKP N
Sbjct: 60  SLGGKPQKNQRLPLSVARLMMKKQKEREQKMLQERLILGQFGGKLGGSSKRSAGKHKPGN 119

Query: 121 RGLKASEGRFRNGILDVKHLLNSAGPSKNHDTSRTSMFNS 160
           RGLK+SEG FRNGIL+VKHLLNS   S++ +T  T+M N+
Sbjct: 120 RGLKSSEGHFRNGILNVKHLLNSTA-SRDRETG-TNMSNT 157


>Glyma08g14450.1 
          Length = 184

 Score =  195 bits (496), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 104/160 (65%), Positives = 121/160 (75%), Gaps = 3/160 (1%)

Query: 1   MGKMFDKKKKLAHGHGPPKEDSNMLEQQMDIRSIMKDVQNFSYSHMAWKERKKIENNKVV 60
           MGKM  K KK A GHGPP+E ++  EQ+MDIR IMKDV+NFSYSHM+WKERKKIEN  VV
Sbjct: 1   MGKMC-KNKKQAGGHGPPREQTDTQEQEMDIRKIMKDVENFSYSHMSWKERKKIENRNVV 59

Query: 61  SLGGKPPKNQRLPLSVARPXXXXXXXXXXXXXXXNMILGRFGGKLGGSNKKSVGKHKPEN 120
           SLGGKP KNQRLPLSVAR                 +ILG+FGGKLGGS+K+S GKHKP N
Sbjct: 60  SLGGKPQKNQRLPLSVARLMMKKQKEREQKMLQERLILGQFGGKLGGSSKRSAGKHKPGN 119

Query: 121 RGLKASEGRFRNGILDVKHLLNSAGPSKNHDTSRTSMFNS 160
           RGLK+SEG FRNGIL+VKHLLNS   S++ +T  T+M N+
Sbjct: 120 RGLKSSEGHFRNGILNVKHLLNSTA-SRDRETG-TNMSNT 157