Miyakogusa Predicted Gene

Lj0g3v0005909.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0005909.1 Non Chatacterized Hit- tr|Q2PF06|Q2PF06_TRIPR
Putative hydroxymethylglutaryl-CoA lyase (Fragment)
OS,89.02,1e-34,HMGL-like,Pyruvate carboxyltransferase; Aldolase,NULL;
no description,Aldolase-type TIM barrel; HYDR,CUFF.346.1
         (82 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g36340.1                                                       150   3e-37
Glyma20g08360.1                                                       150   4e-37
Glyma14g04110.1                                                       148   2e-36
Glyma19g30880.1                                                       140   3e-34

>Glyma07g36340.1 
          Length = 433

 Score =  150 bits (379), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 73/82 (89%), Positives = 78/82 (95%)

Query: 1   MGISAVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLLSAGDFISKHL 60
           MGISAVDSSV+GLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKL+SAG+FI KHL
Sbjct: 352 MGISAVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLMSAGEFIGKHL 411

Query: 61  GRPSGSKTAVALGRVTSDASKI 82
           GRPSGSKT +A  RVT+DASKI
Sbjct: 412 GRPSGSKTTIAFSRVTADASKI 433


>Glyma20g08360.1 
          Length = 435

 Score =  150 bits (378), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 74/82 (90%), Positives = 78/82 (95%)

Query: 1   MGISAVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLLSAGDFISKHL 60
           MGISAVDSSV+GLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKL+ AG+FI KHL
Sbjct: 354 MGISAVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLMLAGEFIGKHL 413

Query: 61  GRPSGSKTAVALGRVTSDASKI 82
           GRPSGSKTAVA  RVT+DASKI
Sbjct: 414 GRPSGSKTAVAFSRVTADASKI 435


>Glyma14g04110.1 
          Length = 459

 Score =  148 bits (373), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 73/82 (89%), Positives = 77/82 (93%)

Query: 1   MGISAVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLLSAGDFISKHL 60
           MGIS VDSSV+GLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKL+ AGDFIS HL
Sbjct: 376 MGISTVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLMLAGDFISNHL 435

Query: 61  GRPSGSKTAVALGRVTSDASKI 82
           GRPS SKTA+AL RVTS+ASKI
Sbjct: 436 GRPSTSKTAIALNRVTSNASKI 457


>Glyma19g30880.1 
          Length = 412

 Score =  140 bits (353), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 70/82 (85%), Positives = 74/82 (90%)

Query: 1   MGISAVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLLSAGDFISKHL 60
           MGIS VDSSVSGLGGCPYAKGA+GNVATEDVVYMLNGLGVKTNVDLGKL+ AGDFI KHL
Sbjct: 331 MGISTVDSSVSGLGGCPYAKGATGNVATEDVVYMLNGLGVKTNVDLGKLMLAGDFICKHL 390

Query: 61  GRPSGSKTAVALGRVTSDASKI 82
           GR SGSK A AL +VTS ASK+
Sbjct: 391 GRASGSKAATALSKVTSHASKL 412