Miyakogusa Predicted Gene

Lj0g3v0005849.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0005849.1 Non Chatacterized Hit- tr|I0ZAF2|I0ZAF2_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,48.89,0.0000000000001,seg,NULL,CUFF.331.1
         (268 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g42880.1                                                       354   7e-98
Glyma08g16400.1                                                       129   4e-30

>Glyma15g42880.1 
          Length = 290

 Score =  354 bits (908), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 188/281 (66%), Positives = 209/281 (74%), Gaps = 29/281 (10%)

Query: 1   MESLQFKPEFPQNQLHFMXXXXXXXXXXXXXTTISFIHIRAFCA---------------S 45
           MESL F P+F Q Q HFM              TIS IH RAFCA               S
Sbjct: 1   MESLHFTPQFRQLQFHFMNKRFPKLKF-----TISSIHFRAFCASSSSTTTTLTQTQNLS 55

Query: 46  SSSPIQTKVRRKVKASESDAQLKENWLASLSYP-----NRLNEEQDLTRKNDASEWILGI 100
               I    +R+VKAS  D Q KENWLASLS P     + LN E + T +ND S+W+LGI
Sbjct: 56  DPQIIVPGKKRRVKAS--DTQFKENWLASLSNPFPEKTHLLNGEHEPTHQNDGSKWVLGI 113

Query: 101 DPDVSGAVALLKTHDSVCSPQVFDSPHVQILVGKR--TRRRLDAKSVVELVRSFDAPLGT 158
           DPDVSGAVALLKTH SVCS QVFDSPHV+ILVGK   TRRRLDAKSVVELV  F AP+GT
Sbjct: 114 DPDVSGAVALLKTHGSVCSAQVFDSPHVKILVGKNKTTRRRLDAKSVVELVCGFRAPIGT 173

Query: 159 TAYIEQSLPFPQDGKQGWWSGGFGYGLWIGILVASGFSVVPVPSFTWKAKFELSGSRISK 218
           TAYIEQSLP+PQDGKQGWWSGGFGYGLWIGILVASGFSV+PVPSFTWKAKF+LSG+  +K
Sbjct: 174 TAYIEQSLPYPQDGKQGWWSGGFGYGLWIGILVASGFSVIPVPSFTWKAKFKLSGNGTTK 233

Query: 219 DDSRRVAATLFPSVSSLLLRKKDHGRAEALLIAAYGKDQKK 259
           DDSRR+A+TLFPS++S+L RKKDHGRAEALLIAAYG+DQ K
Sbjct: 234 DDSRRLASTLFPSMTSMLSRKKDHGRAEALLIAAYGQDQNK 274


>Glyma08g16400.1 
          Length = 77

 Score =  129 bits (323), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 59/74 (79%), Positives = 68/74 (91%)

Query: 175 GWWSGGFGYGLWIGILVASGFSVVPVPSFTWKAKFELSGSRISKDDSRRVAATLFPSVSS 234
           GWWSGGFGYGLWIGILVASGFSV+PVPSFTWKAKFELSG+  +KDDSRR+A+TLFPS++S
Sbjct: 1   GWWSGGFGYGLWIGILVASGFSVIPVPSFTWKAKFELSGNGTTKDDSRRIASTLFPSMTS 60

Query: 235 LLLRKKDHGRAEAL 248
           +L RKKDHG +  L
Sbjct: 61  MLSRKKDHGTSLVL 74