Miyakogusa Predicted Gene

Lj0g3v0004639.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0004639.1 Non Chatacterized Hit- tr|I1HGE5|I1HGE5_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,75,0.012,no
description,Nucleotide-binding, alpha-beta plait; zf-CCCH,Zinc finger,
CCCH-type; RRM_5,NULL; zin,CUFF.294.1
         (318 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g30590.2                                                       362   e-100
Glyma12g30590.1                                                       362   e-100
Glyma07g20090.2                                                       317   1e-86
Glyma07g20090.1                                                       317   1e-86
Glyma03g34840.1                                                       313   1e-85
Glyma19g37530.1                                                       313   2e-85
Glyma20g00950.1                                                       312   4e-85
Glyma08g17310.1                                                       117   2e-26
Glyma15g39220.1                                                       111   1e-24

>Glyma12g30590.2 
          Length = 315

 Score =  362 bits (930), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/187 (91%), Positives = 172/187 (91%)

Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 60

Query: 61  GVDVHGQPIDPRRIQDHXXXXXXXXXXXXSKYGDIESLNVCDNLADHMVGNVYVQFREEE 120
           GVD HG PIDPR+IQDH            SKYGDIESLNVCDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDAHGHPIDPRKIQDHFEEFYEDLFDELSKYGDIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 121 HAGNAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 180
           HA NAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL
Sbjct: 121 HAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 180

Query: 181 RRQLFGK 187
           RRQLFGK
Sbjct: 181 RRQLFGK 187



 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 24/36 (66%), Positives = 28/36 (77%)

Query: 257 DPSEERRARIEQWNREREEQGSASKANTEQTNNGDS 292
           D SEERRARIEQWNRERE+Q    K N E+ NNG++
Sbjct: 260 DGSEERRARIEQWNREREDQEPGYKVNAEEINNGNA 295


>Glyma12g30590.1 
          Length = 315

 Score =  362 bits (930), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/187 (91%), Positives = 172/187 (91%)

Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 60

Query: 61  GVDVHGQPIDPRRIQDHXXXXXXXXXXXXSKYGDIESLNVCDNLADHMVGNVYVQFREEE 120
           GVD HG PIDPR+IQDH            SKYGDIESLNVCDNLADHMVGNVYVQFREEE
Sbjct: 61  GVDAHGHPIDPRKIQDHFEEFYEDLFDELSKYGDIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 121 HAGNAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 180
           HA NAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL
Sbjct: 121 HAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 180

Query: 181 RRQLFGK 187
           RRQLFGK
Sbjct: 181 RRQLFGK 187



 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 24/36 (66%), Positives = 28/36 (77%)

Query: 257 DPSEERRARIEQWNREREEQGSASKANTEQTNNGDS 292
           D SEERRARIEQWNRERE+Q    K N E+ NNG++
Sbjct: 260 DGSEERRARIEQWNREREDQEPGYKVNAEEINNGNA 295


>Glyma07g20090.2 
          Length = 271

 Score =  317 bits (811), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 145/187 (77%), Positives = 160/187 (85%)

Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +PSISPT+LLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDVHGQPIDPRRIQDHXXXXXXXXXXXXSKYGDIESLNVCDNLADHMVGNVYVQFREEE 120
           GVD  GQP+DPR+IQ H            +K+GDIESLNVCDNLADHM+GNVYVQFREE+
Sbjct: 61  GVDPQGQPLDPRKIQQHFEDFYEDIFTELAKFGDIESLNVCDNLADHMIGNVYVQFREED 120

Query: 121 HAGNAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 180
            A  A+  L GRFY  RPII DFSPVTDFREATCRQ+EEN+CNRGGYCNFMH+K I R+L
Sbjct: 121 QAAKALHALHGRFYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRDL 180

Query: 181 RRQLFGK 187
           RR+LFG+
Sbjct: 181 RRRLFGR 187


>Glyma07g20090.1 
          Length = 271

 Score =  317 bits (811), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 145/187 (77%), Positives = 160/187 (85%)

Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +PSISPT+LLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDVHGQPIDPRRIQDHXXXXXXXXXXXXSKYGDIESLNVCDNLADHMVGNVYVQFREEE 120
           GVD  GQP+DPR+IQ H            +K+GDIESLNVCDNLADHM+GNVYVQFREE+
Sbjct: 61  GVDPQGQPLDPRKIQQHFEDFYEDIFTELAKFGDIESLNVCDNLADHMIGNVYVQFREED 120

Query: 121 HAGNAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 180
            A  A+  L GRFY  RPII DFSPVTDFREATCRQ+EEN+CNRGGYCNFMH+K I R+L
Sbjct: 121 QAAKALHALHGRFYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRDL 180

Query: 181 RRQLFGK 187
           RR+LFG+
Sbjct: 181 RRRLFGR 187


>Glyma03g34840.1 
          Length = 314

 Score =  313 bits (802), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 147/191 (76%), Positives = 162/191 (84%), Gaps = 4/191 (2%)

Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDM--- 57
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKP+ISPT++LSNMYQRPDM   
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNMS 60

Query: 58  -ITPGVDVHGQPIDPRRIQDHXXXXXXXXXXXXSKYGDIESLNVCDNLADHMVGNVYVQF 116
            IT       Q +DP ++QDH            SKYG I+SLN+CDNLADHMVGNVYVQF
Sbjct: 61  IITNPDQPQPQSLDPDKVQDHFDDFYEDLFEELSKYGPIQSLNICDNLADHMVGNVYVQF 120

Query: 117 REEEHAGNAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRI 176
           REE+HA NA+ NLTGRFY+GRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+I
Sbjct: 121 REEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 180

Query: 177 SRELRRQLFGK 187
           SR+LRR+LFG+
Sbjct: 181 SRDLRRKLFGR 191


>Glyma19g37530.1 
          Length = 314

 Score =  313 bits (802), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 147/191 (76%), Positives = 162/191 (84%), Gaps = 4/191 (2%)

Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDM--- 57
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKP+ISPT++LSNMYQRPDM   
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNMN 60

Query: 58  -ITPGVDVHGQPIDPRRIQDHXXXXXXXXXXXXSKYGDIESLNVCDNLADHMVGNVYVQF 116
            IT       Q +DP ++QDH            SKYG I+SLN+CDNLADHMVGNVYVQF
Sbjct: 61  IITNPDQPQPQSLDPDKVQDHFDDFYEDLFEELSKYGPIQSLNICDNLADHMVGNVYVQF 120

Query: 117 REEEHAGNAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRI 176
           REE+HA NA+ NLTGRFY+GRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+I
Sbjct: 121 REEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 180

Query: 177 SRELRRQLFGK 187
           SR+LRR+LFG+
Sbjct: 181 SRDLRRKLFGR 191


>Glyma20g00950.1 
          Length = 268

 Score =  312 bits (799), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 143/187 (76%), Positives = 159/187 (85%)

Query: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 60
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +PSISPT+LLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITP 60

Query: 61  GVDVHGQPIDPRRIQDHXXXXXXXXXXXXSKYGDIESLNVCDNLADHMVGNVYVQFREEE 120
           GVD  GQ +DPR+IQ H            +K+G+IESLNVCDNLADHM+GNVYVQFREE+
Sbjct: 61  GVDPQGQTLDPRKIQQHFEDFYEDIFTELAKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 121 HAGNAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 180
            A  A+  L GRFY  RPII DFSPVTDFREATCRQ+EEN+CNRGGYCNFMH+K I R+L
Sbjct: 121 QAAKALHALRGRFYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRDL 180

Query: 181 RRQLFGK 187
           RR+LFG+
Sbjct: 181 RRRLFGR 187


>Glyma08g17310.1 
          Length = 561

 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 3/170 (1%)

Query: 9   FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITPGVDVHGQP 68
           FGTE+D+ +CPF+ K GACR G RCSR+H  P  S T+L+ NMY  P +        G  
Sbjct: 186 FGTEQDKAHCPFHLKTGACRFGIRCSRVHFYPDKSSTLLIKNMYSGPGLACDQDQDEGLE 245

Query: 69  IDPRRIQDHXXXXXXXXXXXXSKYGDIESLNVCDNLADHMVGNVYVQFREEEHAGNAVRN 128
                ++               K+G+I +  VC N + H+ GNVYVQ++  + A  A   
Sbjct: 246 YTDEEVERCFEEFYEDVHTEFLKFGEIVNFKVCKNGSFHLRGNVYVQYKSLDSALLAYNT 305

Query: 129 LTGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 175
           + GR++AG+ +   F  +T ++ A C +Y ++   TC+ G  CNF+H  R
Sbjct: 306 VNGRYFAGKQVSCQFVNLTRWKVAICGEYMKSGFKTCSHGTTCNFIHCFR 355


>Glyma15g39220.1 
          Length = 530

 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 89/170 (52%), Gaps = 3/170 (1%)

Query: 9   FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITPGVDVHGQP 68
           FGTE+D+ +CPF+ K GAC  G RCSR+H  P  S T L+ NMY  P +        G  
Sbjct: 168 FGTEQDKAHCPFHLKTGACCFGIRCSRVHFYPDKSSTFLIKNMYNGPGLACDRDQDEGLE 227

Query: 69  IDPRRIQDHXXXXXXXXXXXXSKYGDIESLNVCDNLADHMVGNVYVQFREEEHAGNAVRN 128
                ++               K+G++ +  VC N + H  GNVYVQ++  + A  A  +
Sbjct: 228 YKDEEVERCFEEFYEDVHTEFLKFGEVVNFKVCKNGSFHWRGNVYVQYKSLDSALLAYNS 287

Query: 129 LTGRFYAGRPIIVDFSPVTDFREATCRQYEEN---TCNRGGYCNFMHLKR 175
           + GR++AG+ +   F  +T ++ A C +Y ++   TC+ G  CNF+H  R
Sbjct: 288 VNGRYFAGKQVSCQFVNLTRWKVAICGEYMKSGFKTCSHGTACNFIHCFR 337