Miyakogusa Predicted Gene

Lj0g3v0004399.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0004399.1 tr|A9RZV6|A9RZV6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_179856,53.33,3e-17,ACETYLTRANSFERASE-RELATED,NULL,
gene.g348.t1.1
         (113 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g02160.1                                                       166   6e-42
Glyma07g08810.1                                                       158   1e-39

>Glyma03g02160.1 
          Length = 283

 Score =  166 bits (419), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 82/117 (70%), Positives = 91/117 (77%), Gaps = 19/117 (16%)

Query: 4   RLVLFGLCLAVGFVATKLALYGWKDKENPMPVW-------------------SYQWIKRK 44
           RL +FGLCLA+G+VATK+AL GWKDKENPMP W                    YQWIKRK
Sbjct: 53  RLAIFGLCLALGYVATKVALQGWKDKENPMPKWRCRVMWITRLCARCILFSFGYQWIKRK 112

Query: 45  GRPAPRGIAPIIVSNHVSYIEPIFYFYELFATIVASESHDSLPFVGTIIRAMQVLTI 101
           G+PAPR IAPIIVSNHVSYIEPIFYFYELF TIVA+ESHDS+PFVGTIIRAMQV+ +
Sbjct: 113 GKPAPREIAPIIVSNHVSYIEPIFYFYELFPTIVAAESHDSIPFVGTIIRAMQVIYV 169


>Glyma07g08810.1 
          Length = 526

 Score =  158 bits (400), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 78/110 (70%), Positives = 85/110 (77%), Gaps = 19/110 (17%)

Query: 11  CLAVGFVATKLALYGWKDKENPMPVW-------------------SYQWIKRKGRPAPRG 51
           CLAVG+VATK+AL GWKDKENPMP W                    YQWIKRKG+PAPR 
Sbjct: 88  CLAVGYVATKVALAGWKDKENPMPKWRCRVMWITRLCARCILFSFGYQWIKRKGKPAPRE 147

Query: 52  IAPIIVSNHVSYIEPIFYFYELFATIVASESHDSLPFVGTIIRAMQVLTI 101
           IAPIIVSNHVSYIEPIFYFYELF TIVA+ESHDS+PFVGTIIRAMQV+ +
Sbjct: 148 IAPIIVSNHVSYIEPIFYFYELFPTIVAAESHDSIPFVGTIIRAMQVIYV 197