Miyakogusa Predicted Gene

Lj0g3v0004319.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0004319.1 Non Chatacterized Hit- tr|E1Z235|E1Z235_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,29.11,0.000000000002,DUF1990,Domain of unknown function
DUF1990,CUFF.281.1
         (193 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g22910.1                                                       311   2e-85

>Glyma16g22910.1 
          Length = 207

 Score =  311 bits (797), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 143/161 (88%), Positives = 151/161 (93%)

Query: 1   MFFLSWGRPSPQDQKACINKAGTFNYDDKYKGATAKSLSSLKADEGLSKDGFLLNNARVL 60
           M FLSWGRPSPQDQK CINK+GTFNYDDKYKGATAKS++SLKADEGLSKDGFLLN ARVL
Sbjct: 1   MLFLSWGRPSPQDQKTCINKSGTFNYDDKYKGATAKSVASLKADEGLSKDGFLLNEARVL 60

Query: 61  MGSGVETFEKGKSALRSWRHFGLNWAFVDPKTPVQQGVTFCVCVKEFLPWVMMPLQIAYV 120
           +GSG+ETFEKGKSALRSWRHFGLNWAFVDPKTPVQQGV FCVCVKEF PW+MMPLQ+ YV
Sbjct: 61  VGSGIETFEKGKSALRSWRHFGLNWAFVDPKTPVQQGVKFCVCVKEFFPWLMMPLQVVYV 120

Query: 121 NETSTTKNRVASFGFGSGTLNGHLLAGEERFSIEIDENNQV 161
           NET T K R ASFGFGSGTL+GHLLAGEERFSIEIDENNQV
Sbjct: 121 NETGTAKYRTASFGFGSGTLHGHLLAGEERFSIEIDENNQV 161