Miyakogusa Predicted Gene

Lj0g3v0004189.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0004189.1 tr|G7L707|G7L707_MEDTR Vacuolar protein sorting
protein OS=Medicago truncatula GN=MTR_8g044150 PE=4
,83.07,0,EAP30,EAP30; Vps36_ESCRT-II,Vacuolar protein sorting protein
36, GLUE domain; GLUE,Vacuolar protein ,CUFF.275.1
         (447 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g24460.2                                                       637   0.0  
Glyma08g24460.1                                                       607   e-173
Glyma15g34660.1                                                       227   3e-59
Glyma15g34640.1                                                        76   6e-14

>Glyma08g24460.2 
          Length = 449

 Score =  637 bits (1644), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/451 (74%), Positives = 358/451 (79%), Gaps = 6/451 (1%)

Query: 1   MAGNCLPAVKLTGSGRPVLLPNEIECFFLSGVDLLCEDEPNSWFPHLKSGXXXXXXXXXX 60
           MAGNCLP VKLTGSGRPVL PNEIECFFLSGVDLL ED+P+  FPHLKSG          
Sbjct: 1   MAGNCLPPVKLTGSGRPVLEPNEIECFFLSGVDLLSEDDPS--FPHLKSGLLILTTHRLL 58

Query: 61  XXPEPADGGTSSA--VHLAAISHIFPHKKSLKSVFASPRVRFQVSPSPEGGVAASGSRSV 118
             P+ A     +A  + LAA+SHIF  K SL+ VFASPRVRFQVS SPEG V+A+GSRSV
Sbjct: 59  WLPDSAASAGGTAGAIPLAAVSHIFSPKMSLRKVFASPRVRFQVSLSPEGRVSAAGSRSV 118

Query: 119 VATIVVRGKGEFDAFVAKFXXXXXXXX--XXXXXSGQXXXXXXXXXXXXXXXXXXIYGRD 176
           VAT VVRGKG+ DAF+AKF               S                    IY  D
Sbjct: 119 VATAVVRGKGDCDAFLAKFTENCRARAWQEAESGSSSGSNSAVMAATATSSSSGGIYSSD 178

Query: 177 GTVRMVGVSGILRKEQEMWESTDKSLQDAFQDLNALMSKAKEMVMLAEKMRQKLLSGSNS 236
           GTVRMVGVSGILRKEQEMWESTD+SLQ+AFQDLNALMSKAKEMVMLAEKMR KLLSGSNS
Sbjct: 179 GTVRMVGVSGILRKEQEMWESTDRSLQEAFQDLNALMSKAKEMVMLAEKMRLKLLSGSNS 238

Query: 237 QTNATNEEEMGTKEEMQDWLLSVGIISPVTKESAGAMYHQQLSRQLADFVKVPLERAGGI 296
           QTNATN+EEMG+KEEMQDWLLSVGIISPVTKESAGA+YHQQLSRQLADFVKVPLE+AGGI
Sbjct: 239 QTNATNDEEMGSKEEMQDWLLSVGIISPVTKESAGALYHQQLSRQLADFVKVPLEKAGGI 298

Query: 297 INLIDIYCLFNRARGTELISPDDLLQACSLWEKFDVPVVLRKFDRGVMVIQTKSHSDEEV 356
           INLIDIYCLFNRARGTELISPDDLLQACSLWEKFDV VVLRKFD GVMVIQTKSHSDEEV
Sbjct: 299 INLIDIYCLFNRARGTELISPDDLLQACSLWEKFDVQVVLRKFDSGVMVIQTKSHSDEEV 358

Query: 357 FAKIKVLVMKPDALRAGISASDXXXXXXXXXXXXKEHLLSAESKGILCRDISPDGFRFYI 416
           F K+K+LV+KPDALRAGISASD            KEHLLSAESKG+LCRDISPDGFRFYI
Sbjct: 359 FNKVKMLVLKPDALRAGISASDAARTLGVAPAMAKEHLLSAESKGLLCRDISPDGFRFYI 418

Query: 417 NLFPEIDRDDMHVVKDQGIYASWVSANHAHG 447
           NLF EIDRD M++VKDQGIYASWV AN  H 
Sbjct: 419 NLFVEIDRDYMYLVKDQGIYASWVQANDTHA 449


>Glyma08g24460.1 
          Length = 451

 Score =  607 bits (1564), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 322/434 (74%), Positives = 344/434 (79%), Gaps = 6/434 (1%)

Query: 1   MAGNCLPAVKLTGSGRPVLLPNEIECFFLSGVDLLCEDEPNSWFPHLKSGXXXXXXXXXX 60
           MAGNCLP VKLTGSGRPVL PNEIECFFLSGVDLL ED+P+  FPHLKSG          
Sbjct: 1   MAGNCLPPVKLTGSGRPVLEPNEIECFFLSGVDLLSEDDPS--FPHLKSGLLILTTHRLL 58

Query: 61  XXPEPADGGTSSA--VHLAAISHIFPHKKSLKSVFASPRVRFQVSPSPEGGVAASGSRSV 118
             P+ A     +A  + LAA+SHIF  K SL+ VFASPRVRFQVS SPEG V+A+GSRSV
Sbjct: 59  WLPDSAASAGGTAGAIPLAAVSHIFSPKMSLRKVFASPRVRFQVSLSPEGRVSAAGSRSV 118

Query: 119 VATIVVRGKGEFDAFVAKFXXXXXXXX--XXXXXSGQXXXXXXXXXXXXXXXXXXIYGRD 176
           VAT VVRGKG+ DAF+AKF               S                    IY  D
Sbjct: 119 VATAVVRGKGDCDAFLAKFTENCRARAWQEAESGSSSGSNSAVMAATATSSSSGGIYSSD 178

Query: 177 GTVRMVGVSGILRKEQEMWESTDKSLQDAFQDLNALMSKAKEMVMLAEKMRQKLLSGSNS 236
           GTVRMVGVSGILRKEQEMWESTD+SLQ+AFQDLNALMSKAKEMVMLAEKMR KLLSGSNS
Sbjct: 179 GTVRMVGVSGILRKEQEMWESTDRSLQEAFQDLNALMSKAKEMVMLAEKMRLKLLSGSNS 238

Query: 237 QTNATNEEEMGTKEEMQDWLLSVGIISPVTKESAGAMYHQQLSRQLADFVKVPLERAGGI 296
           QTNATN+EEMG+KEEMQDWLLSVGIISPVTKESAGA+YHQQLSRQLADFVKVPLE+AGGI
Sbjct: 239 QTNATNDEEMGSKEEMQDWLLSVGIISPVTKESAGALYHQQLSRQLADFVKVPLEKAGGI 298

Query: 297 INLIDIYCLFNRARGTELISPDDLLQACSLWEKFDVPVVLRKFDRGVMVIQTKSHSDEEV 356
           INLIDIYCLFNRARGTELISPDDLLQACSLWEKFDV VVLRKFD GVMVIQTKSHSDEEV
Sbjct: 299 INLIDIYCLFNRARGTELISPDDLLQACSLWEKFDVQVVLRKFDSGVMVIQTKSHSDEEV 358

Query: 357 FAKIKVLVMKPDALRAGISASDXXXXXXXXXXXXKEHLLSAESKGILCRDISPDGFRFYI 416
           F K+K+LV+KPDALRAGISASD            KEHLLSAESKG+LCRDISPDGFRFYI
Sbjct: 359 FNKVKMLVLKPDALRAGISASDAARTLGVAPAMAKEHLLSAESKGLLCRDISPDGFRFYI 418

Query: 417 NLFPEIDRDDMHVV 430
           NLF EIDRD M+ V
Sbjct: 419 NLFVEIDRDYMYFV 432


>Glyma15g34660.1 
          Length = 144

 Score =  227 bits (578), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 111/123 (90%), Positives = 115/123 (93%)

Query: 212 LMSKAKEMVMLAEKMRQKLLSGSNSQTNATNEEEMGTKEEMQDWLLSVGIISPVTKESAG 271
           L SKAKEMVMLAEKMR KLLSGSNSQTNATN+EEMG+KEEMQDWLLSVGIISPVTKES G
Sbjct: 10  LQSKAKEMVMLAEKMRLKLLSGSNSQTNATNDEEMGSKEEMQDWLLSVGIISPVTKESVG 69

Query: 272 AMYHQQLSRQLADFVKVPLERAGGIINLIDIYCLFNRARGTELISPDDLLQACSLWEKFD 331
           A+YHQQLSRQLADFVKVPLE+AGGIINLIDIYCLFN A G ELISPDDLLQA SLWEKFD
Sbjct: 70  ALYHQQLSRQLADFVKVPLEKAGGIINLIDIYCLFNHACGIELISPDDLLQASSLWEKFD 129

Query: 332 VPV 334
           V V
Sbjct: 130 VYV 132


>Glyma15g34640.1 
          Length = 154

 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 36/54 (66%), Positives = 40/54 (74%)

Query: 372 AGISASDXXXXXXXXXXXXKEHLLSAESKGILCRDISPDGFRFYINLFPEIDRD 425
           +GISAS             KEHLLSAESKG+LCRDI+PDGFRFYINLF +IDRD
Sbjct: 75  SGISASGAARTLGVAPAMAKEHLLSAESKGLLCRDINPDGFRFYINLFLKIDRD 128