Miyakogusa Predicted Gene
- Lj0g3v0002119.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0002119.3 Non Chatacterized Hit- tr|I1LKQ8|I1LKQ8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.35313
PE,83.64,7e-19,GTPase activation domain, GAP,Rho GTPase activation
protein; no description,Rho GTPase-activating pr,CUFF.124.3
(155 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g08610.1 114 4e-26
Glyma11g18900.1 98 3e-21
Glyma11g18900.2 97 6e-21
Glyma12g09560.1 96 2e-20
Glyma12g31080.1 93 1e-19
Glyma03g35480.1 92 1e-19
Glyma19g38120.1 92 2e-19
Glyma15g23620.1 92 2e-19
Glyma11g30680.1 91 6e-19
Glyma13g39230.1 89 1e-18
Glyma19g44820.1 82 2e-16
Glyma03g42090.1 82 2e-16
Glyma19g39280.1 82 3e-16
Glyma02g17070.1 79 2e-15
Glyma10g02720.1 79 2e-15
Glyma03g36630.1 77 7e-15
Glyma10g20240.1 75 3e-14
Glyma16g10200.1 70 1e-12
>Glyma10g08610.1
Length = 331
Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/131 (50%), Positives = 73/131 (55%), Gaps = 45/131 (34%)
Query: 32 ATMFGVSTESMQLSYD-TRGNSVPKILLQMQRHLYAQGGLQAEGIFIINTDNT------- 83
A +FGVSTESMQLSYD TRGNSVP +LL MQR LYAQGGLQ EGIF IN +N+
Sbjct: 114 ANIFGVSTESMQLSYDATRGNSVPTLLLLMQRQLYAQGGLQVEGIFRINAENSQEELVRE 173
Query: 84 -------------------------------------HTEASLLDWAINLMVDVVQEEHL 106
TEA+LLDW INLM DV Q EHL
Sbjct: 174 QLNRGIVPYGIDVHCLAEQVMQSQSEEECAQLVRFLPQTEATLLDWGINLMADVAQLEHL 233
Query: 107 SKMNAHNIAMV 117
+KMNA N+AMV
Sbjct: 234 NKMNARNVAMV 244
>Glyma11g18900.1
Length = 493
Score = 97.8 bits (242), Expect = 3e-21, Method: Composition-based stats.
Identities = 46/55 (83%), Positives = 48/55 (87%)
Query: 32 ATMFGVSTESMQLSYDTRGNSVPKILLQMQRHLYAQGGLQAEGIFIINTDNTHTE 86
AT+FGVSTESMQLSYDTRGNSVP ILL MQRHLYA GGLQAEGIF IN DN+ E
Sbjct: 144 ATVFGVSTESMQLSYDTRGNSVPTILLLMQRHLYALGGLQAEGIFRINADNSQEE 198
Score = 67.8 bits (164), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 8/72 (11%)
Query: 84 HTEASLLDWAINLMVDVVQEEHLSKMNAHNIAMVPVNSVSPGIVGRKMHTYTVLVVFIFV 143
HTEASLLDWAINLM DV QEEHL+KMNA NIAMV +P + H L ++
Sbjct: 273 HTEASLLDWAINLMADVAQEEHLNKMNARNIAMV----FAPNMT----HMADPLTALMYA 324
Query: 144 IRLQIIVKILLM 155
+++ +K L++
Sbjct: 325 VQVMNFLKNLIL 336
>Glyma11g18900.2
Length = 340
Score = 97.1 bits (240), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 48/55 (87%)
Query: 32 ATMFGVSTESMQLSYDTRGNSVPKILLQMQRHLYAQGGLQAEGIFIINTDNTHTE 86
AT+FGVSTESMQLSYDTRGNSVP ILL MQRHLYA GGLQAEGIF IN DN+ E
Sbjct: 4 ATVFGVSTESMQLSYDTRGNSVPTILLLMQRHLYALGGLQAEGIFRINADNSQEE 58
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 8/72 (11%)
Query: 84 HTEASLLDWAINLMVDVVQEEHLSKMNAHNIAMVPVNSVSPGIVGRKMHTYTVLVVFIFV 143
HTEASLLDWAINLM DV QEEHL+KMNA NIAMV +P + H L ++
Sbjct: 120 HTEASLLDWAINLMADVAQEEHLNKMNARNIAMV----FAPNMT----HMADPLTALMYA 171
Query: 144 IRLQIIVKILLM 155
+++ +K L++
Sbjct: 172 VQVMNFLKNLIL 183
>Glyma12g09560.1
Length = 433
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/56 (80%), Positives = 48/56 (85%)
Query: 32 ATMFGVSTESMQLSYDTRGNSVPKILLQMQRHLYAQGGLQAEGIFIINTDNTHTEA 87
AT+FGVSTESMQLSYDTRGNSVP ILL MQRHLYA GGLQ EGIF IN DN+ E+
Sbjct: 118 ATVFGVSTESMQLSYDTRGNSVPTILLLMQRHLYALGGLQEEGIFRINADNSQEES 173
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 30/34 (88%)
Query: 84 HTEASLLDWAINLMVDVVQEEHLSKMNAHNIAMV 117
HTEASLLDWAINLM DV QEE L+KMNA NIAMV
Sbjct: 234 HTEASLLDWAINLMADVAQEEDLNKMNARNIAMV 267
>Glyma12g31080.1
Length = 345
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 46/55 (83%)
Query: 32 ATMFGVSTESMQLSYDTRGNSVPKILLQMQRHLYAQGGLQAEGIFIINTDNTHTE 86
A++FGVSTESMQLSYD+RGNSVP ILL MQRHLY QGGLQ EGIF IN DN E
Sbjct: 43 ASVFGVSTESMQLSYDSRGNSVPTILLLMQRHLYVQGGLQVEGIFRINADNGQEE 97
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 84 HTEASLLDWAINLMVDVVQEEHLSKMNAHNIAMV 117
HTEASLLDWAINLM DVV EH++KMNA NIAMV
Sbjct: 159 HTEASLLDWAINLMADVVLHEHVNKMNARNIAMV 192
>Glyma03g35480.1
Length = 493
Score = 92.4 bits (228), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/55 (78%), Positives = 46/55 (83%)
Query: 32 ATMFGVSTESMQLSYDTRGNSVPKILLQMQRHLYAQGGLQAEGIFIINTDNTHTE 86
A +FGVSTESMQLS+D RGNSVP ILL MQRHLYAQGGLQAEGIF IN +N E
Sbjct: 130 ANVFGVSTESMQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIFRINAENGQEE 184
Score = 57.4 bits (137), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/33 (78%), Positives = 29/33 (87%)
Query: 85 TEASLLDWAINLMVDVVQEEHLSKMNAHNIAMV 117
TEA+LLDWAINLM DV Q E+L+KMNA NIAMV
Sbjct: 247 TEAALLDWAINLMADVAQMENLNKMNARNIAMV 279
>Glyma19g38120.1
Length = 500
Score = 92.0 bits (227), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/55 (78%), Positives = 46/55 (83%)
Query: 32 ATMFGVSTESMQLSYDTRGNSVPKILLQMQRHLYAQGGLQAEGIFIINTDNTHTE 86
A +FGVSTESMQLS+D RGNSVP ILL MQRHLYAQGGLQAEGIF IN +N E
Sbjct: 135 ANVFGVSTESMQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIFRINAENGQEE 189
Score = 57.0 bits (136), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/33 (78%), Positives = 29/33 (87%)
Query: 85 TEASLLDWAINLMVDVVQEEHLSKMNAHNIAMV 117
TEA+LLDWAINLM DV Q E+L+KMNA NIAMV
Sbjct: 252 TEAALLDWAINLMADVAQMENLNKMNARNIAMV 284
>Glyma15g23620.1
Length = 160
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 32 ATMFGVSTESMQLSYDTRGNSVPKILLQMQRHLYAQGGLQAEGIFIINTDNTHTEASLLD 91
A +FGVSTESMQLS+D RGNSVP ILL MQRHLYAQGGLQAEGIF I+ +N E +
Sbjct: 2 ANVFGVSTESMQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIFRIDAENGQEEF-IWS 60
Query: 92 WAINLMVDVVQEEHLSKMNAHNIA 115
W + ++ E + N + A
Sbjct: 61 WIVGFWSGLLFESCPGEFNKYTNA 84
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 27/33 (81%)
Query: 85 TEASLLDWAINLMVDVVQEEHLSKMNAHNIAMV 117
TE +LLDWAINLM DV Q E+L+ MNA NIAMV
Sbjct: 121 TEVALLDWAINLMADVTQMENLNNMNARNIAMV 153
>Glyma11g30680.1
Length = 211
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 66/116 (56%), Gaps = 35/116 (30%)
Query: 37 VSTESMQLSYDTRGNSVPKILLQMQRHLYAQGGLQ-----AEGIFI-------------- 77
VSTES+ S+D RGNSVP ILL MQRHLYAQGGLQ +GI +
Sbjct: 11 VSTESLLFSFDARGNSVPTILLFMQRHLYAQGGLQIIGEVPDGIDVHYLAGLIKAWFREL 70
Query: 78 -------INTDNT---------HTEASLLDWAINLMVDVVQEEHLSKMNAHNIAMV 117
++++ TEA+LLDWAINLM DV Q E+L+ MNA NIAMV
Sbjct: 71 PTGVLDPLSSEEECAQLVRLLPPTEAALLDWAINLMADVAQMENLNNMNARNIAMV 126
>Glyma13g39230.1
Length = 415
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 46/55 (83%)
Query: 32 ATMFGVSTESMQLSYDTRGNSVPKILLQMQRHLYAQGGLQAEGIFIINTDNTHTE 86
A++FGVSTESMQLS+D+RGNSVP ILL MQ+HLY QGGLQ EGIF IN DN E
Sbjct: 113 ASVFGVSTESMQLSHDSRGNSVPTILLLMQKHLYVQGGLQVEGIFRINADNGQEE 167
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 32/34 (94%)
Query: 84 HTEASLLDWAINLMVDVVQEEHLSKMNAHNIAMV 117
HTEASLLDWAINLM DVVQ E+++KMNAHN+AMV
Sbjct: 229 HTEASLLDWAINLMADVVQHENVNKMNAHNVAMV 262
>Glyma19g44820.1
Length = 497
Score = 82.4 bits (202), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/55 (67%), Positives = 44/55 (80%)
Query: 32 ATMFGVSTESMQLSYDTRGNSVPKILLQMQRHLYAQGGLQAEGIFIINTDNTHTE 86
A +FGVS +SMQ SYD RGNSVP ILL MQ+ LY++GGL+AEGIF IN DN+ E
Sbjct: 157 AKVFGVSAKSMQCSYDERGNSVPTILLMMQKRLYSEGGLKAEGIFRINADNSQEE 211
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/33 (72%), Positives = 28/33 (84%)
Query: 85 TEASLLDWAINLMVDVVQEEHLSKMNAHNIAMV 117
TEA+LLDWAINLM DVV+ E +KMNA N+AMV
Sbjct: 274 TEAALLDWAINLMADVVEREQFNKMNARNVAMV 306
>Glyma03g42090.1
Length = 497
Score = 82.4 bits (202), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/55 (67%), Positives = 44/55 (80%)
Query: 32 ATMFGVSTESMQLSYDTRGNSVPKILLQMQRHLYAQGGLQAEGIFIINTDNTHTE 86
A +FGVS +SMQ SYD RGNSVP ILL MQ+ LY++GGL+AEGIF IN DN+ E
Sbjct: 159 AKVFGVSAKSMQCSYDERGNSVPTILLMMQKRLYSEGGLKAEGIFRINADNSQEE 213
Score = 57.0 bits (136), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/33 (75%), Positives = 28/33 (84%)
Query: 85 TEASLLDWAINLMVDVVQEEHLSKMNAHNIAMV 117
TEA+LLDWAINLM DVV+ E +KMNA NIAMV
Sbjct: 276 TEAALLDWAINLMADVVEHEQFNKMNARNIAMV 308
>Glyma19g39280.1
Length = 177
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 44/54 (81%)
Query: 33 TMFGVSTESMQLSYDTRGNSVPKILLQMQRHLYAQGGLQAEGIFIINTDNTHTE 86
++FGVS ESMQ SYD++GNSVP ILL MQ LY+QGGL+AEGIF IN +N+ E
Sbjct: 108 SVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKAEGIFRINPENSQEE 161
>Glyma02g17070.1
Length = 382
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 43/54 (79%)
Query: 33 TMFGVSTESMQLSYDTRGNSVPKILLQMQRHLYAQGGLQAEGIFIINTDNTHTE 86
++FGVS ESMQ SYD +GNSVP ILL MQ LY+QGGL+AEGIF IN +N+ E
Sbjct: 110 SVFGVSAESMQCSYDPKGNSVPTILLLMQDRLYSQGGLKAEGIFRINPENSQEE 163
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 85 TEASLLDWAINLMVDVVQEEHLSKMNAHNIAMV 117
TE++LL WAI+LM DVV+EE L+KMNA NIAMV
Sbjct: 226 TESALLSWAIDLMADVVEEEELNKMNARNIAMV 258
>Glyma10g02720.1
Length = 393
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 43/54 (79%)
Query: 33 TMFGVSTESMQLSYDTRGNSVPKILLQMQRHLYAQGGLQAEGIFIINTDNTHTE 86
++FGVS ESMQ SYD +GNSVP ILL MQ LY+QGGL+AEGIF IN +N+ E
Sbjct: 111 SVFGVSAESMQCSYDPKGNSVPTILLLMQDRLYSQGGLKAEGIFRINPENSQEE 164
>Glyma03g36630.1
Length = 467
Score = 77.0 bits (188), Expect = 7e-15, Method: Composition-based stats.
Identities = 35/54 (64%), Positives = 43/54 (79%)
Query: 33 TMFGVSTESMQLSYDTRGNSVPKILLQMQRHLYAQGGLQAEGIFIINTDNTHTE 86
++FGVS ESMQ SYD++GNSVP ILL MQ LY+Q GL+AEGIF IN +N+ E
Sbjct: 108 SVFGVSAESMQCSYDSKGNSVPTILLLMQDRLYSQDGLKAEGIFRINPENSQEE 161
>Glyma10g20240.1
Length = 151
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 57/107 (53%), Gaps = 27/107 (25%)
Query: 38 STESMQLSYDTRGNSVPKILLQMQRHL-------YAQGG-----------LQAEGIFIIN 79
STESMQLS+D RGNSVP ILL MQ+H Y L E +
Sbjct: 1 STESMQLSFDARGNSVPTILLLMQKHFCLGEFNKYTNAWFRELPTGVLDPLSLEQVMQSQ 60
Query: 80 TDNT---------HTEASLLDWAINLMVDVVQEEHLSKMNAHNIAMV 117
++ TEA+LLDWAINLM +V Q E+L+ MNA NIAMV
Sbjct: 61 SEEECAQLMRLLPPTEATLLDWAINLMANVAQMENLNNMNARNIAMV 107
>Glyma16g10200.1
Length = 41
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 35/38 (92%)
Query: 34 MFGVSTESMQLSYDTRGNSVPKILLQMQRHLYAQGGLQ 71
+FGVST+SMQLS+D RGNSVP ILL MQRHLYAQGGLQ
Sbjct: 4 VFGVSTKSMQLSFDARGNSVPTILLLMQRHLYAQGGLQ 41