Miyakogusa Predicted Gene

Lj0g3v0001919.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0001919.1 Non Chatacterized Hit- tr|I0YVH7|I0YVH7_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,50,0.00000000000006,BRCA2_REPEAT,BRCA2 repeat; SUBFAMILY NOT
NAMED,NULL; BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRC,CUFF.107.1
         (536 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g11750.1                                                       455   e-128

>Glyma13g11750.1 
          Length = 1056

 Score =  455 bits (1171), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 271/552 (49%), Positives = 330/552 (59%), Gaps = 55/552 (9%)

Query: 1   MSTWKIFSDAGTNFRWQISKDAASNVXXXXXXXXXXXXXXXXXXXXXXXTLQLFTHQGEQ 60
           M TW+I S++  NF WQ                                ++Q    QG  
Sbjct: 7   MCTWQILSNSPNNFHWQ-------------RITTTTTHQHASPPSFPLPSMQDLLRQGTP 53

Query: 61  ELGIGDNSSSC----GFGNSLFKTGSGKRVTISSTGLVRAKTLLGLKEDAVGSTVLSPQ- 115
            L + D++       GF NSLF TGSGK+VTISS+GLVRAKTLL    D + S++ SP  
Sbjct: 54  TLPLQDDARVLDDGFGFSNSLFTTGSGKKVTISSSGLVRAKTLL----DTIDSSIQSPHR 109

Query: 116 ----HRIGEAHDGKXXXXXXXXXXXXHGVKESCKIMSAVPFQSPLVSGRGSSTLENGFEP 171
               H IGE    +            H V             SP V G   +  +NGFE 
Sbjct: 110 TNKLHAIGEKRKQRQEEEDESPQLKLHRV-----------IDSPSVGGGCRALKKNGFEE 158

Query: 172 DTCGAAVKPAPIKFQTAGGRSLSISNDALRRARXXXXXXXXXXXXXXXXXXXXXXXXPDT 231
                A K APIKF TAGGRS+SIS DAL+RA+                        P  
Sbjct: 159 TD---AYKQAPIKFHTAGGRSISISKDALQRAQSLLGDVGDLFEGGDAGSSMFSF--PFE 213

Query: 232 RQTNAASPCERSAFSTPLIHHVTS--GNNDKMKSFTYPLQSSRQQTEFSTKFLCEGNGDN 289
           RQ + A+  +R   +TPL+  V +   +N   KSFT+PLQSSRQ+ E   KF CEG+G+N
Sbjct: 214 RQADTAASSQRGDCNTPLVRRVLTPARSNCTAKSFTFPLQSSRQR-ELPPKFPCEGDGNN 272

Query: 290 LIMKFDAVGNEN-VSSRKSSNVCGQK-PLHDRNERADQAAYHSSLTGFSSKIDSCGVPVG 347
           LI +FDAVG E+  +S KS+N CGQK PL+  N+    A + SSL GFSSKID+  V + 
Sbjct: 273 LITEFDAVGEESGYNSLKSTNACGQKKPLYGWNQAPHSAVHDSSLNGFSSKIDTHAVSIR 332

Query: 348 GRPLVDISNTINTAHPNNRLPASGKRRLGLRVIASPFKKPRNSQVFA--DQEVENFPN-- 403
            RPLVD+SNT N    NNR PASGKRRLGLRV  SPFKKPR+SQ+    +Q++   P+  
Sbjct: 333 -RPLVDVSNTTNPDQTNNRQPASGKRRLGLRVTVSPFKKPRSSQISVPLEQDIGKSPHDL 391

Query: 404 ---ASGASECKKKVSTRYPFQYPRMHIKDYFAVPPLQQEVHFPNPVGQVTSGNAEKYMFC 460
              +SG S CK++VS RYPFQYPRMHIKD+F VPPLQ++ HFPN   QVTS NAEKY+F 
Sbjct: 392 SQLSSGVSGCKREVSIRYPFQYPRMHIKDFFVVPPLQEKAHFPNLSRQVTSVNAEKYVFY 451

Query: 461 DGSGNNGMGAEAFVNLLAQHGTSLHFASKEWVLNHYKWIVWKLACYERCNPAKHAGKFLT 520
           + SG+NGMGAEAFV+LLA HG S+HFA+KEWV NHYKWIVWKLACYER  PA  AGKFLT
Sbjct: 452 ERSGDNGMGAEAFVHLLAHHGASMHFATKEWVTNHYKWIVWKLACYERYYPASSAGKFLT 511

Query: 521 VSNVLEELKYRY 532
           V+NVLEELKYRY
Sbjct: 512 VTNVLEELKYRY 523