Miyakogusa Predicted Gene
- Lj6g3v2287350.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2287350.1 tr|A9PGS1|A9PGS1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1116974 PE=2
SV=1,77.73,0,RNA-BINDING PROTEIN RELATED,NULL; K homology RNA-binding
domain,K Homology domain; no description,NU,CUFF.61030.1
(257 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g005590.2 | RNA-binding KH domain protein | HC | chr2:2238... 374 e-104
Medtr2g005590.3 | RNA-binding KH domain protein | HC | chr2:2237... 369 e-102
Medtr2g005590.1 | RNA-binding KH domain protein | HC | chr2:2237... 369 e-102
Medtr7g074100.1 | RNA-binding KH domain protein | HC | chr7:2767... 230 1e-60
Medtr8g006605.1 | RNA-binding KH domain protein | HC | chr8:7443... 226 2e-59
Medtr8g006580.1 | RNA-binding KH domain protein | HC | chr8:7074... 226 2e-59
Medtr8g005550.1 | RNA-binding KH domain protein | HC | chr8:2306... 226 2e-59
Medtr3g010220.1 | RNA-binding KH domain protein | HC | chr3:2351... 222 3e-58
Medtr8g005430.1 | RNA-binding KH domain protein | HC | chr8:8684... 219 2e-57
Medtr5g075710.1 | RNA-binding KH domain protein | HC | chr5:3222... 218 4e-57
Medtr5g075710.3 | RNA-binding KH domain protein | HC | chr5:3222... 218 5e-57
Medtr5g075710.2 | RNA-binding KH domain protein | HC | chr5:3222... 209 2e-54
Medtr3g062640.1 | RNA-binding KH domain protein | HC | chr3:2830... 207 6e-54
Medtr4g036415.1 | splicing factor-like protein | HC | chr4:13104... 99 4e-21
>Medtr2g005590.2 | RNA-binding KH domain protein | HC |
chr2:223815-220572 | 20130731
Length = 311
Score = 374 bits (960), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/276 (72%), Positives = 216/276 (78%), Gaps = 22/276 (7%)
Query: 1 MGERIP-----SGTYFQFXXXXXXXXXXXXXXXXXX-----------XDRERYLAELLAE 44
MGE IP +G+YFQF DRERYLAELLAE
Sbjct: 1 MGEWIPQSGNNNGSYFQFPPHAPASAPPPPHPPHGHGHGLPPSPIRFSDRERYLAELLAE 60
Query: 45 RQKLGPFVQVLPQCTRLITQEIRRITGFNQGFI-EHDRPESDS-PFRS-LSQHPNSRPMD 101
RQKLGPF+QVLPQ TRL+TQEIRRI+ GFI EHD P+S + PFR L QHP +RPMD
Sbjct: 61 RQKLGPFLQVLPQSTRLLTQEIRRISSAGSGFIMEHDHPDSSTTPFRPPLPQHPITRPMD 120
Query: 102 LEGWPAVPIEDNGNLQRIASFQAPPMGWPGTQGVPTTPVVKRVIRLDVPVEKYPNYNFVG 161
+ WP EDNGN+QR+ SFQA P+GW G QG+PTTP+VKRVIRLDVPV+KYPNYNFVG
Sbjct: 121 FD-WPHR--EDNGNIQRMGSFQASPVGWHGPQGIPTTPIVKRVIRLDVPVDKYPNYNFVG 177
Query: 162 RILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFP 221
RILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHL EPLH+LVEAEFP
Sbjct: 178 RILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHLKEPLHLLVEAEFP 237
Query: 222 EDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 257
EDIINSRLDHAVA+LENLLKPVDESLDHYKKQQLRE
Sbjct: 238 EDIINSRLDHAVAVLENLLKPVDESLDHYKKQQLRE 273
>Medtr2g005590.3 | RNA-binding KH domain protein | HC |
chr2:223787-220586 | 20130731
Length = 312
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/277 (71%), Positives = 216/277 (77%), Gaps = 23/277 (8%)
Query: 1 MGERIP-----SGTYFQFXXXXXXXXXXXXXXXXXX-----------XDRERYLAELLAE 44
MGE IP +G+YFQF DRERYLAELLAE
Sbjct: 1 MGEWIPQSGNNNGSYFQFPPHAPASAPPPPHPPHGHGHGLPPSPIRFSDRERYLAELLAE 60
Query: 45 RQKLGPFVQVLPQCTRLITQEIRRITGFNQGFI-EHDRPESDS-PFRS-LSQHPNSRPMD 101
RQKLGPF+QVLPQ TRL+TQEIRRI+ GFI EHD P+S + PFR L QHP +RPMD
Sbjct: 61 RQKLGPFLQVLPQSTRLLTQEIRRISSAGSGFIMEHDHPDSSTTPFRPPLPQHPITRPMD 120
Query: 102 LEGWPAVPIEDNGNLQRIASFQAPPMGWPGTQGVPTTPVVKRVIRLDVPVEKYPN-YNFV 160
+ WP EDNGN+QR+ SFQA P+GW G QG+PTTP+VKRVIRLDVPV+KYPN YNFV
Sbjct: 121 FD-WPHR--EDNGNIQRMGSFQASPVGWHGPQGIPTTPIVKRVIRLDVPVDKYPNQYNFV 177
Query: 161 GRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEF 220
GRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHL EPLH+LVEAEF
Sbjct: 178 GRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHLKEPLHLLVEAEF 237
Query: 221 PEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 257
PEDIINSRLDHAVA+LENLLKPVDESLDHYKKQQLRE
Sbjct: 238 PEDIINSRLDHAVAVLENLLKPVDESLDHYKKQQLRE 274
>Medtr2g005590.1 | RNA-binding KH domain protein | HC |
chr2:223787-220586 | 20130731
Length = 312
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/277 (71%), Positives = 216/277 (77%), Gaps = 23/277 (8%)
Query: 1 MGERIP-----SGTYFQFXXXXXXXXXXXXXXXXXX-----------XDRERYLAELLAE 44
MGE IP +G+YFQF DRERYLAELLAE
Sbjct: 1 MGEWIPQSGNNNGSYFQFPPHAPASAPPPPHPPHGHGHGLPPSPIRFSDRERYLAELLAE 60
Query: 45 RQKLGPFVQVLPQCTRLITQEIRRITGFNQGFI-EHDRPESDS-PFRS-LSQHPNSRPMD 101
RQKLGPF+QVLPQ TRL+TQEIRRI+ GFI EHD P+S + PFR L QHP +RPMD
Sbjct: 61 RQKLGPFLQVLPQSTRLLTQEIRRISSAGSGFIMEHDHPDSSTTPFRPPLPQHPITRPMD 120
Query: 102 LEGWPAVPIEDNGNLQRIASFQAPPMGWPGTQGVPTTPVVKRVIRLDVPVEKYPN-YNFV 160
+ WP EDNGN+QR+ SFQA P+GW G QG+PTTP+VKRVIRLDVPV+KYPN YNFV
Sbjct: 121 FD-WPHR--EDNGNIQRMGSFQASPVGWHGPQGIPTTPIVKRVIRLDVPVDKYPNQYNFV 177
Query: 161 GRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEF 220
GRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHL EPLH+LVEAEF
Sbjct: 178 GRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHLKEPLHLLVEAEF 237
Query: 221 PEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 257
PEDIINSRLDHAVA+LENLLKPVDESLDHYKKQQLRE
Sbjct: 238 PEDIINSRLDHAVAVLENLLKPVDESLDHYKKQQLRE 274
>Medtr7g074100.1 | RNA-binding KH domain protein | HC |
chr7:27677743-27671597 | 20130731
Length = 281
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/226 (52%), Positives = 156/226 (69%), Gaps = 10/226 (4%)
Query: 36 RYLAELLAERQKLGPFVQVLPQCTRLITQEIRRITGF--NQGFIEHDRPE--SDSPFRSL 91
+YL+ELLAE QKLGPF+QVLP C+RL+ QEI R++G NQGF + DR + S SP S
Sbjct: 28 QYLSELLAEHQKLGPFLQVLPICSRLLNQEILRVSGMLSNQGFGDFDRLQHRSPSPMASS 87
Query: 92 SQHPNSRPMDLEGWPAVPIEDNGNLQRIASFQAPPMGWPGTQGVPTTPVVKRVIRLDVPV 151
+ N + W ++ E R+ M W P++ VKR++RL++PV
Sbjct: 88 NLMSNVSGTGMGAWNSLQQE------RLCGPPGMNMDWQSAPASPSSFTVKRILRLEIPV 141
Query: 152 EKYPNYNFVGRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHLNEP 211
+ +PN+NFVGR+LGPRGNSLKRVEA T CRVYIRG GS+KD KE+KL+ +PGYEHLNE
Sbjct: 142 DTFPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEDKLRGRPGYEHLNEN 201
Query: 212 LHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 257
LH+L+EA+ P ++++ RL A I+E LLKPVDES D K+QQLRE
Sbjct: 202 LHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRE 247
>Medtr8g006605.1 | RNA-binding KH domain protein | HC |
chr8:744315-740918 | 20130731
Length = 276
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 154/224 (68%), Gaps = 15/224 (6%)
Query: 36 RYLAELLAERQKLGPFVQVLPQCTRLITQEIRRITGF--NQGFIEHDRPESDSPFRSLSQ 93
+YL+ELLAE QKLGPF+++LP +RL+ QEI R++G NQGF + DR SP S
Sbjct: 32 QYLSELLAEYQKLGPFIKILPNSSRLLNQEILRVSGMLSNQGFADFDRLRHRSPSPLSSS 91
Query: 94 HPNSRPMDLEGWPAVPIEDNGNLQRIASFQAPPMGWPGTQGVPTTPVVKRVIRLDVPVEK 153
+ GW +N +R+ M W G P++ VKR++RL++PV+
Sbjct: 92 NLT-------GW------NNLQHERLCGTPGMTMDWQGAPASPSSYTVKRILRLEIPVDT 138
Query: 154 YPNYNFVGRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHLNEPLH 213
YPN+NFVGR+LGPRGNSLKRVEA T CRV+IRG GS+KD KEEKL+ +PGYEHLNEPLH
Sbjct: 139 YPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPDKEEKLRGRPGYEHLNEPLH 198
Query: 214 VLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 257
+L+EA+ P ++++ RL A I+E LLKPVDES D K+QQLRE
Sbjct: 199 ILIEADLPANVVDMRLRQAQEIIEELLKPVDESEDFIKRQQLRE 242
>Medtr8g006580.1 | RNA-binding KH domain protein | HC |
chr8:707473-703207 | 20130731
Length = 276
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 154/224 (68%), Gaps = 15/224 (6%)
Query: 36 RYLAELLAERQKLGPFVQVLPQCTRLITQEIRRITGF--NQGFIEHDRPESDSPFRSLSQ 93
+YL+ELLAE QKLGPF+++LP +RL+ QEI R++G NQGF + DR SP S
Sbjct: 32 QYLSELLAEYQKLGPFIKILPNSSRLLNQEILRVSGMLSNQGFADFDRLRHRSPSPLSSS 91
Query: 94 HPNSRPMDLEGWPAVPIEDNGNLQRIASFQAPPMGWPGTQGVPTTPVVKRVIRLDVPVEK 153
+ GW +N +R+ M W G P++ VKR++RL++PV+
Sbjct: 92 NLT-------GW------NNLQHERLCGTPGMTMDWQGAPASPSSYTVKRILRLEIPVDT 138
Query: 154 YPNYNFVGRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHLNEPLH 213
YPN+NFVGR+LGPRGNSLKRVEA T CRV+IRG GS+KD KEEKL+ +PGYEHLNEPLH
Sbjct: 139 YPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPDKEEKLRGRPGYEHLNEPLH 198
Query: 214 VLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 257
+L+EA+ P ++++ RL A I+E LLKPVDES D K+QQLRE
Sbjct: 199 ILIEADLPANVVDMRLRQAQEIIEELLKPVDESEDFIKRQQLRE 242
>Medtr8g005550.1 | RNA-binding KH domain protein | HC |
chr8:230618-227384 | 20130731
Length = 276
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 154/224 (68%), Gaps = 15/224 (6%)
Query: 36 RYLAELLAERQKLGPFVQVLPQCTRLITQEIRRITGF--NQGFIEHDRPESDSPFRSLSQ 93
+YL+ELLAE QKLGPF+++LP +RL+ QEI R++G NQGF + DR SP S
Sbjct: 32 QYLSELLAEYQKLGPFIKILPNSSRLLNQEILRVSGMLSNQGFADFDRLRHRSPSPLSSS 91
Query: 94 HPNSRPMDLEGWPAVPIEDNGNLQRIASFQAPPMGWPGTQGVPTTPVVKRVIRLDVPVEK 153
+ GW +N +R+ M W G P++ VKR++RL++PV+
Sbjct: 92 NLT-------GW------NNLQHERLCGTPGMTMDWQGAPASPSSYTVKRILRLEIPVDT 138
Query: 154 YPNYNFVGRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHLNEPLH 213
YPN+NFVGR+LGPRGNSLKRVEA T CRV+IRG GS+KD KEEKL+ +PGYEHLNEPLH
Sbjct: 139 YPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPDKEEKLRGRPGYEHLNEPLH 198
Query: 214 VLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 257
+L+EA+ P ++++ RL A I+E LLKPVDES D K+QQLRE
Sbjct: 199 ILIEADLPANVVDMRLRQAQEIIEELLKPVDESEDFIKRQQLRE 242
>Medtr3g010220.1 | RNA-binding KH domain protein | HC |
chr3:2351169-2345557 | 20130731
Length = 293
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/227 (51%), Positives = 153/227 (67%), Gaps = 7/227 (3%)
Query: 33 DRERYLAELLAERQKLGPFVQVLPQCTRLITQEIRRITGF--NQGFIEHDRPESDSPFRS 90
+ ++YL+ELL ERQK+ PF+ VLP C RL+ QEI R+T N + E SP +
Sbjct: 37 EHDQYLSELLGERQKISPFMAVLPHCYRLLNQEILRVTTILGNASVLGQSGLEHGSPLAA 96
Query: 91 LSQHPNSRPMDLEGWPAVPIEDNGNLQRIASFQAPPMGWPGTQGVPTTPVVKRVIRLDVP 150
+D GW + + +L + +P W QG + +VK+ IR+D+P
Sbjct: 97 GGMFSKGG-LDPNGWVSRFQSEMPSLIQ----SSPTPSWLSPQGSSSGLLVKKTIRVDIP 151
Query: 151 VEKYPNYNFVGRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHLNE 210
V+ +PN+NFVGR+LGPRGNSLKRVEA TECRV IRG GS+KD+ +EE ++ KPGYEHLNE
Sbjct: 152 VDSFPNFNFVGRLLGPRGNSLKRVEANTECRVLIRGRGSIKDTAREEMMRGKPGYEHLNE 211
Query: 211 PLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 257
PLH+LVEAE P +II++RL A ILE+LL+PV+ES D YKKQQLRE
Sbjct: 212 PLHILVEAELPAEIIDARLMQAREILEDLLRPVEESHDFYKKQQLRE 258
>Medtr8g005430.1 | RNA-binding KH domain protein | HC |
chr8:868473-864902 | 20130731
Length = 275
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 153/224 (68%), Gaps = 16/224 (7%)
Query: 36 RYLAELLAERQKLGPFVQVLPQCTRLITQEIRRITGF--NQGFIEHDRPESDSPFRSLSQ 93
+YL+ELLAE QKLGPF+++LP +RL+ QEI R++G NQGF + DR SP S
Sbjct: 32 QYLSELLAEYQKLGPFIKILPNSSRLLNQEILRVSGMLSNQGFADFDRLRHRSPSPLSSS 91
Query: 94 HPNSRPMDLEGWPAVPIEDNGNLQRIASFQAPPMGWPGTQGVPTTPVVKRVIRLDVPVEK 153
+ GW +N +R+ M W G P++ VKR++RL++PV+
Sbjct: 92 NLT-------GW------NNLQHERLCGTPGMTMDWQGAPASPSSYTVKRILRLEIPVDT 138
Query: 154 YPNYNFVGRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHLNEPLH 213
YPN+NFVGR+LGPRGNSLKRVEA T CRV+IRG GS+KD +EKL+ +PGYEHLNEPLH
Sbjct: 139 YPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDP-DQEKLRGRPGYEHLNEPLH 197
Query: 214 VLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 257
+L+EA+ P ++++ RL A I+E LLKPVDES D K+QQLRE
Sbjct: 198 ILIEADLPANVVDMRLRQAQEIIEELLKPVDESEDFIKRQQLRE 241
>Medtr5g075710.1 | RNA-binding KH domain protein | HC |
chr5:32222823-32219192 | 20130731
Length = 281
Score = 218 bits (555), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 152/227 (66%), Gaps = 18/227 (7%)
Query: 36 RYLAELLAERQKLGPFVQVLPQCTRLITQEIRRITGF-----NQGFIEHDRPESDSPFRS 90
+YL EL+AE QKLGPF+QVLP CTRL+ QEI R +G NQGF ++DR + S S
Sbjct: 33 QYLTELVAEYQKLGPFMQVLPLCTRLLNQEILRASGKSGLMQNQGFSDYDRVQFGSTKPS 92
Query: 91 LSQHPNSRPMDLEGWPAVPIEDNGNLQRIASFQAPPMGWPGTQGVPTTPVVKRVIRLDVP 150
L ++ GW ++ S + + W + + +VK+++RLD+P
Sbjct: 93 LMPSLDTTS-SFTGWNSL------------SHEGLNVDWQRAPAISNSHIVKKMLRLDIP 139
Query: 151 VEKYPNYNFVGRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHLNE 210
+ +P +NFVGR+LGPRGNSLKRVEA T CRV+IRG GS+KD KEE L+ +PG+EHLNE
Sbjct: 140 HDNHPTFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDFDKEELLRGRPGFEHLNE 199
Query: 211 PLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 257
PLH+L+EAE P ++++ RL A I+E LLKPVDES D YK+QQLRE
Sbjct: 200 PLHILIEAELPVNVVDLRLRQAQEIIEELLKPVDESQDIYKRQQLRE 246
>Medtr5g075710.3 | RNA-binding KH domain protein | HC |
chr5:32222391-32219192 | 20130731
Length = 266
Score = 218 bits (554), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 152/227 (66%), Gaps = 18/227 (7%)
Query: 36 RYLAELLAERQKLGPFVQVLPQCTRLITQEIRRITGF-----NQGFIEHDRPESDSPFRS 90
+YL EL+AE QKLGPF+QVLP CTRL+ QEI R +G NQGF ++DR + S S
Sbjct: 18 QYLTELVAEYQKLGPFMQVLPLCTRLLNQEILRASGKSGLMQNQGFSDYDRVQFGSTKPS 77
Query: 91 LSQHPNSRPMDLEGWPAVPIEDNGNLQRIASFQAPPMGWPGTQGVPTTPVVKRVIRLDVP 150
L ++ GW ++ S + + W + + +VK+++RLD+P
Sbjct: 78 LMPSLDTTS-SFTGWNSL------------SHEGLNVDWQRAPAISNSHIVKKMLRLDIP 124
Query: 151 VEKYPNYNFVGRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHLNE 210
+ +P +NFVGR+LGPRGNSLKRVEA T CRV+IRG GS+KD KEE L+ +PG+EHLNE
Sbjct: 125 HDNHPTFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDFDKEELLRGRPGFEHLNE 184
Query: 211 PLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 257
PLH+L+EAE P ++++ RL A I+E LLKPVDES D YK+QQLRE
Sbjct: 185 PLHILIEAELPVNVVDLRLRQAQEIIEELLKPVDESQDIYKRQQLRE 231
>Medtr5g075710.2 | RNA-binding KH domain protein | HC |
chr5:32222712-32219192 | 20130731
Length = 244
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/222 (49%), Positives = 147/222 (66%), Gaps = 18/222 (8%)
Query: 41 LLAERQKLGPFVQVLPQCTRLITQEIRRITGF-----NQGFIEHDRPESDSPFRSLSQHP 95
+L E QKLGPF+QVLP CTRL+ QEI R +G NQGF ++DR + S SL
Sbjct: 1 MLIEYQKLGPFMQVLPLCTRLLNQEILRASGKSGLMQNQGFSDYDRVQFGSTKPSLMPSL 60
Query: 96 NSRPMDLEGWPAVPIEDNGNLQRIASFQAPPMGWPGTQGVPTTPVVKRVIRLDVPVEKYP 155
++ GW ++ S + + W + + +VK+++RLD+P + +P
Sbjct: 61 DTTS-SFTGWNSL------------SHEGLNVDWQRAPAISNSHIVKKMLRLDIPHDNHP 107
Query: 156 NYNFVGRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHLNEPLHVL 215
+NFVGR+LGPRGNSLKRVEA T CRV+IRG GS+KD KEE L+ +PG+EHLNEPLH+L
Sbjct: 108 TFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDFDKEELLRGRPGFEHLNEPLHIL 167
Query: 216 VEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 257
+EAE P ++++ RL A I+E LLKPVDES D YK+QQLRE
Sbjct: 168 IEAELPVNVVDLRLRQAQEIIEELLKPVDESQDIYKRQQLRE 209
>Medtr3g062640.1 | RNA-binding KH domain protein | HC |
chr3:28307380-28305002 | 20130731
Length = 237
Score = 207 bits (528), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 144/216 (66%), Gaps = 19/216 (8%)
Query: 36 RYLAELLAERQKLGPFVQVLPQCTRLITQEIRRITGFN------QGFIEHDRPE--SDSP 87
+YL ELL+E QKLGPF+QVLP C+RL+ QEI R++G N QGF + DR + + S
Sbjct: 29 QYLMELLSEHQKLGPFMQVLPLCSRLLNQEILRVSGKNGLLQNHQGFNDFDRMQFMNQSH 88
Query: 88 FRSLSQHPNSRPMDLEGWPAVPIEDNGNLQRIASFQAPPMGWPGTQGVPTTPVVKRVIRL 147
S PN GW ++ + +A + M W VP + +VK+++RL
Sbjct: 89 MASSDLKPN-----FTGWNSLSHD------MLAEVKGLNMDWQTAPVVPNSHIVKKILRL 137
Query: 148 DVPVEKYPNYNFVGRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEH 207
D+P + YPN+NFVGR+LGPRGNSLKRVEA T CRVYIRG GS+KD KEE L+ +PGYEH
Sbjct: 138 DIPKDGYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDLDKEELLRGRPGYEH 197
Query: 208 LNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPV 243
L++ LH+L+EAE P +I++ RL HA I+E LLKPV
Sbjct: 198 LSDELHILIEAELPANIVDVRLRHAQEIIEELLKPV 233
>Medtr4g036415.1 | splicing factor-like protein | HC |
chr4:13104578-13109685 | 20130731
Length = 767
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 76/112 (67%), Gaps = 6/112 (5%)
Query: 146 RLDVPVEKYPNYNFVGRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGY 205
+L +P+++YP YNF+G I+GPRGN+ KR+E T ++ IRG GSVK+ ++K KP
Sbjct: 217 KLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDP 276
Query: 206 EHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 257
NE LHVLVEA+ + L+ A ++E LL+PVDE L+ +K+QQLRE
Sbjct: 277 SE-NEDLHVLVEADTAD-----ALEAAAGMVEKLLQPVDEVLNEHKRQQLRE 322