Miyakogusa Predicted Gene
- Lj6g3v2275040.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2275040.1 Non Characterized Hit- tr|I1LTC7|I1LTC7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,62.5,0.00000005,seg,NULL,CUFF.61036.1
(455 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g005840.3 | evolutionarily carboxy-terminal region protein... 542 e-154
Medtr2g005840.2 | evolutionarily carboxy-terminal region protein... 542 e-154
Medtr2g005840.5 | evolutionarily carboxy-terminal region protein... 542 e-154
Medtr2g005840.1 | evolutionarily carboxy-terminal region protein... 542 e-154
Medtr2g005840.4 | evolutionarily carboxy-terminal region protein... 542 e-154
Medtr2g063460.1 | evolutionarily carboxy-terminal region protein... 279 5e-75
Medtr2g063460.2 | evolutionarily carboxy-terminal region protein... 279 5e-75
Medtr2g032660.1 | evolutionarily carboxy-terminal region protein... 263 3e-70
Medtr4g123630.1 | evolutionarily carboxy-terminal region protein... 262 6e-70
Medtr4g005110.1 | evolutionarily carboxy-terminal region protein... 256 3e-68
Medtr8g088390.1 | evolutionarily carboxy-terminal region protein... 248 1e-65
Medtr8g088390.2 | evolutionarily carboxy-terminal region protein... 247 2e-65
Medtr7g085500.1 | evolutionarily carboxy-terminal region protein... 240 2e-63
Medtr6g032970.1 | evolutionarily carboxy-terminal region protein... 233 2e-61
Medtr2g029540.1 | cleavage and polyadenylation specificity facto... 69 8e-12
>Medtr2g005840.3 | evolutionarily carboxy-terminal region protein |
HC | chr2:345315-338760 | 20130731
Length = 481
Score = 542 bits (1397), Expect = e-154, Method: Compositional matrix adjust.
Identities = 289/445 (64%), Positives = 328/445 (73%), Gaps = 30/445 (6%)
Query: 13 GVQESEAMPYYSSVSTSVDAQNEAVNGTVFAKHDPRSSGSVKPNSLKSTHRXXXXXXXXX 72
GV ESEA+P +SSVSTSV QN++V+ +VFAK DP+SS NS S H
Sbjct: 59 GVHESEAIPCHSSVSTSVCMQNKSVS-SVFAKSDPKSSTLANQNSSSSPH-------TNG 110
Query: 73 XXXXXXXRDITILNKAPPLYPNFTAATPPRTYHQMGKVSSFSNPKHHFFPPTNYRPNTST 132
++I IL KAP L+ NFT ATPPRTY+Q G V SF+NP+ H FP TNYRP+TST
Sbjct: 111 SITSRLSKEIEILKKAPHLHSNFTVATPPRTYNQTGNVPSFANPRSHVFPNTNYRPSTST 170
Query: 133 NYRS--------NGGVSSVNDRFLLSDKFQSGESEMSMEMTRGPRGQYNNVQLQPPAVND 184
NYR NG VS NDR +LS+KF+SGESEMS E+TRGPR N + V D
Sbjct: 171 NYRPITSTNYRPNGAVS--NDRVMLSEKFRSGESEMSKEITRGPRFHQRNSNPESSVVKD 228
Query: 185 ELAVMLRRDQYNLPDFQTEYETAKFYLIKSFNEDDIHKSVKYDVWTSTPNGNKKLNAAFH 244
E A + RDQYNLPDFQT+YETAKFY+IKSFNEDDIHK +KYDVWTSTP+GNKKLNAAF
Sbjct: 229 EFAFTVCRDQYNLPDFQTKYETAKFYMIKSFNEDDIHKGIKYDVWTSTPHGNKKLNAAFQ 288
Query: 245 DAEAQFSQTGTMCPVFLFFSVNASRQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWH 304
+AEA+ SQTGT CP+FLFFSVNAS QFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWH
Sbjct: 289 NAEAKLSQTGTQCPIFLFFSVNASGQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWH 348
Query: 305 IIKDVPNNKFVHIILQNNDNRPVTFSRDTQEIGLKEGLEMLSIFKSYSAKTSLLDDFDFY 364
IIKDVPN +F HI LQ N+N+ VTFSRDTQEI LKEGLEML IFKSY AKTSLLDDFDFY
Sbjct: 349 IIKDVPNRQFAHITLQINENKCVTFSRDTQEITLKEGLEMLKIFKSYPAKTSLLDDFDFY 408
Query: 365 ENREKLFRSQKSTKHTSPKPQXXXXXXXXXXXXXXXXXTVEAREKKIEMQSSGGTKQFNL 424
ENREKL RSQ+ T+HT K + T++AREK+IEMQSS GT Q L
Sbjct: 409 ENREKLCRSQR-TEHTGWKQE--------AYNNDSYHNTMKAREKRIEMQSS-GTNQETL 458
Query: 425 IKLTKNLSLSPSETQLSEKQLHGFR 449
+ LTKNLSL+PSE Q +Q GFR
Sbjct: 459 VNLTKNLSLNPSERQGFRRQ--GFR 481
>Medtr2g005840.2 | evolutionarily carboxy-terminal region protein |
HC | chr2:345315-338760 | 20130731
Length = 481
Score = 542 bits (1397), Expect = e-154, Method: Compositional matrix adjust.
Identities = 289/445 (64%), Positives = 328/445 (73%), Gaps = 30/445 (6%)
Query: 13 GVQESEAMPYYSSVSTSVDAQNEAVNGTVFAKHDPRSSGSVKPNSLKSTHRXXXXXXXXX 72
GV ESEA+P +SSVSTSV QN++V+ +VFAK DP+SS NS S H
Sbjct: 59 GVHESEAIPCHSSVSTSVCMQNKSVS-SVFAKSDPKSSTLANQNSSSSPH-------TNG 110
Query: 73 XXXXXXXRDITILNKAPPLYPNFTAATPPRTYHQMGKVSSFSNPKHHFFPPTNYRPNTST 132
++I IL KAP L+ NFT ATPPRTY+Q G V SF+NP+ H FP TNYRP+TST
Sbjct: 111 SITSRLSKEIEILKKAPHLHSNFTVATPPRTYNQTGNVPSFANPRSHVFPNTNYRPSTST 170
Query: 133 NYRS--------NGGVSSVNDRFLLSDKFQSGESEMSMEMTRGPRGQYNNVQLQPPAVND 184
NYR NG VS NDR +LS+KF+SGESEMS E+TRGPR N + V D
Sbjct: 171 NYRPITSTNYRPNGAVS--NDRVMLSEKFRSGESEMSKEITRGPRFHQRNSNPESSVVKD 228
Query: 185 ELAVMLRRDQYNLPDFQTEYETAKFYLIKSFNEDDIHKSVKYDVWTSTPNGNKKLNAAFH 244
E A + RDQYNLPDFQT+YETAKFY+IKSFNEDDIHK +KYDVWTSTP+GNKKLNAAF
Sbjct: 229 EFAFTVCRDQYNLPDFQTKYETAKFYMIKSFNEDDIHKGIKYDVWTSTPHGNKKLNAAFQ 288
Query: 245 DAEAQFSQTGTMCPVFLFFSVNASRQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWH 304
+AEA+ SQTGT CP+FLFFSVNAS QFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWH
Sbjct: 289 NAEAKLSQTGTQCPIFLFFSVNASGQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWH 348
Query: 305 IIKDVPNNKFVHIILQNNDNRPVTFSRDTQEIGLKEGLEMLSIFKSYSAKTSLLDDFDFY 364
IIKDVPN +F HI LQ N+N+ VTFSRDTQEI LKEGLEML IFKSY AKTSLLDDFDFY
Sbjct: 349 IIKDVPNRQFAHITLQINENKCVTFSRDTQEITLKEGLEMLKIFKSYPAKTSLLDDFDFY 408
Query: 365 ENREKLFRSQKSTKHTSPKPQXXXXXXXXXXXXXXXXXTVEAREKKIEMQSSGGTKQFNL 424
ENREKL RSQ+ T+HT K + T++AREK+IEMQSS GT Q L
Sbjct: 409 ENREKLCRSQR-TEHTGWKQE--------AYNNDSYHNTMKAREKRIEMQSS-GTNQETL 458
Query: 425 IKLTKNLSLSPSETQLSEKQLHGFR 449
+ LTKNLSL+PSE Q +Q GFR
Sbjct: 459 VNLTKNLSLNPSERQGFRRQ--GFR 481
>Medtr2g005840.5 | evolutionarily carboxy-terminal region protein |
HC | chr2:345315-338762 | 20130731
Length = 481
Score = 542 bits (1397), Expect = e-154, Method: Compositional matrix adjust.
Identities = 289/445 (64%), Positives = 328/445 (73%), Gaps = 30/445 (6%)
Query: 13 GVQESEAMPYYSSVSTSVDAQNEAVNGTVFAKHDPRSSGSVKPNSLKSTHRXXXXXXXXX 72
GV ESEA+P +SSVSTSV QN++V+ +VFAK DP+SS NS S H
Sbjct: 59 GVHESEAIPCHSSVSTSVCMQNKSVS-SVFAKSDPKSSTLANQNSSSSPH-------TNG 110
Query: 73 XXXXXXXRDITILNKAPPLYPNFTAATPPRTYHQMGKVSSFSNPKHHFFPPTNYRPNTST 132
++I IL KAP L+ NFT ATPPRTY+Q G V SF+NP+ H FP TNYRP+TST
Sbjct: 111 SITSRLSKEIEILKKAPHLHSNFTVATPPRTYNQTGNVPSFANPRSHVFPNTNYRPSTST 170
Query: 133 NYRS--------NGGVSSVNDRFLLSDKFQSGESEMSMEMTRGPRGQYNNVQLQPPAVND 184
NYR NG VS NDR +LS+KF+SGESEMS E+TRGPR N + V D
Sbjct: 171 NYRPITSTNYRPNGAVS--NDRVMLSEKFRSGESEMSKEITRGPRFHQRNSNPESSVVKD 228
Query: 185 ELAVMLRRDQYNLPDFQTEYETAKFYLIKSFNEDDIHKSVKYDVWTSTPNGNKKLNAAFH 244
E A + RDQYNLPDFQT+YETAKFY+IKSFNEDDIHK +KYDVWTSTP+GNKKLNAAF
Sbjct: 229 EFAFTVCRDQYNLPDFQTKYETAKFYMIKSFNEDDIHKGIKYDVWTSTPHGNKKLNAAFQ 288
Query: 245 DAEAQFSQTGTMCPVFLFFSVNASRQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWH 304
+AEA+ SQTGT CP+FLFFSVNAS QFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWH
Sbjct: 289 NAEAKLSQTGTQCPIFLFFSVNASGQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWH 348
Query: 305 IIKDVPNNKFVHIILQNNDNRPVTFSRDTQEIGLKEGLEMLSIFKSYSAKTSLLDDFDFY 364
IIKDVPN +F HI LQ N+N+ VTFSRDTQEI LKEGLEML IFKSY AKTSLLDDFDFY
Sbjct: 349 IIKDVPNRQFAHITLQINENKCVTFSRDTQEITLKEGLEMLKIFKSYPAKTSLLDDFDFY 408
Query: 365 ENREKLFRSQKSTKHTSPKPQXXXXXXXXXXXXXXXXXTVEAREKKIEMQSSGGTKQFNL 424
ENREKL RSQ+ T+HT K + T++AREK+IEMQSS GT Q L
Sbjct: 409 ENREKLCRSQR-TEHTGWKQE--------AYNNDSYHNTMKAREKRIEMQSS-GTNQETL 458
Query: 425 IKLTKNLSLSPSETQLSEKQLHGFR 449
+ LTKNLSL+PSE Q +Q GFR
Sbjct: 459 VNLTKNLSLNPSERQGFRRQ--GFR 481
>Medtr2g005840.1 | evolutionarily carboxy-terminal region protein |
HC | chr2:345315-338762 | 20130731
Length = 512
Score = 542 bits (1397), Expect = e-154, Method: Compositional matrix adjust.
Identities = 289/445 (64%), Positives = 328/445 (73%), Gaps = 30/445 (6%)
Query: 13 GVQESEAMPYYSSVSTSVDAQNEAVNGTVFAKHDPRSSGSVKPNSLKSTHRXXXXXXXXX 72
GV ESEA+P +SSVSTSV QN++V+ +VFAK DP+SS NS S H
Sbjct: 90 GVHESEAIPCHSSVSTSVCMQNKSVS-SVFAKSDPKSSTLANQNSSSSPH-------TNG 141
Query: 73 XXXXXXXRDITILNKAPPLYPNFTAATPPRTYHQMGKVSSFSNPKHHFFPPTNYRPNTST 132
++I IL KAP L+ NFT ATPPRTY+Q G V SF+NP+ H FP TNYRP+TST
Sbjct: 142 SITSRLSKEIEILKKAPHLHSNFTVATPPRTYNQTGNVPSFANPRSHVFPNTNYRPSTST 201
Query: 133 NYRS--------NGGVSSVNDRFLLSDKFQSGESEMSMEMTRGPRGQYNNVQLQPPAVND 184
NYR NG VS NDR +LS+KF+SGESEMS E+TRGPR N + V D
Sbjct: 202 NYRPITSTNYRPNGAVS--NDRVMLSEKFRSGESEMSKEITRGPRFHQRNSNPESSVVKD 259
Query: 185 ELAVMLRRDQYNLPDFQTEYETAKFYLIKSFNEDDIHKSVKYDVWTSTPNGNKKLNAAFH 244
E A + RDQYNLPDFQT+YETAKFY+IKSFNEDDIHK +KYDVWTSTP+GNKKLNAAF
Sbjct: 260 EFAFTVCRDQYNLPDFQTKYETAKFYMIKSFNEDDIHKGIKYDVWTSTPHGNKKLNAAFQ 319
Query: 245 DAEAQFSQTGTMCPVFLFFSVNASRQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWH 304
+AEA+ SQTGT CP+FLFFSVNAS QFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWH
Sbjct: 320 NAEAKLSQTGTQCPIFLFFSVNASGQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWH 379
Query: 305 IIKDVPNNKFVHIILQNNDNRPVTFSRDTQEIGLKEGLEMLSIFKSYSAKTSLLDDFDFY 364
IIKDVPN +F HI LQ N+N+ VTFSRDTQEI LKEGLEML IFKSY AKTSLLDDFDFY
Sbjct: 380 IIKDVPNRQFAHITLQINENKCVTFSRDTQEITLKEGLEMLKIFKSYPAKTSLLDDFDFY 439
Query: 365 ENREKLFRSQKSTKHTSPKPQXXXXXXXXXXXXXXXXXTVEAREKKIEMQSSGGTKQFNL 424
ENREKL RSQ+ T+HT K + T++AREK+IEMQSS GT Q L
Sbjct: 440 ENREKLCRSQR-TEHTGWKQE--------AYNNDSYHNTMKAREKRIEMQSS-GTNQETL 489
Query: 425 IKLTKNLSLSPSETQLSEKQLHGFR 449
+ LTKNLSL+PSE Q +Q GFR
Sbjct: 490 VNLTKNLSLNPSERQGFRRQ--GFR 512
>Medtr2g005840.4 | evolutionarily carboxy-terminal region protein |
HC | chr2:345315-338762 | 20130731
Length = 512
Score = 542 bits (1397), Expect = e-154, Method: Compositional matrix adjust.
Identities = 289/445 (64%), Positives = 328/445 (73%), Gaps = 30/445 (6%)
Query: 13 GVQESEAMPYYSSVSTSVDAQNEAVNGTVFAKHDPRSSGSVKPNSLKSTHRXXXXXXXXX 72
GV ESEA+P +SSVSTSV QN++V+ +VFAK DP+SS NS S H
Sbjct: 90 GVHESEAIPCHSSVSTSVCMQNKSVS-SVFAKSDPKSSTLANQNSSSSPH-------TNG 141
Query: 73 XXXXXXXRDITILNKAPPLYPNFTAATPPRTYHQMGKVSSFSNPKHHFFPPTNYRPNTST 132
++I IL KAP L+ NFT ATPPRTY+Q G V SF+NP+ H FP TNYRP+TST
Sbjct: 142 SITSRLSKEIEILKKAPHLHSNFTVATPPRTYNQTGNVPSFANPRSHVFPNTNYRPSTST 201
Query: 133 NYRS--------NGGVSSVNDRFLLSDKFQSGESEMSMEMTRGPRGQYNNVQLQPPAVND 184
NYR NG VS NDR +LS+KF+SGESEMS E+TRGPR N + V D
Sbjct: 202 NYRPITSTNYRPNGAVS--NDRVMLSEKFRSGESEMSKEITRGPRFHQRNSNPESSVVKD 259
Query: 185 ELAVMLRRDQYNLPDFQTEYETAKFYLIKSFNEDDIHKSVKYDVWTSTPNGNKKLNAAFH 244
E A + RDQYNLPDFQT+YETAKFY+IKSFNEDDIHK +KYDVWTSTP+GNKKLNAAF
Sbjct: 260 EFAFTVCRDQYNLPDFQTKYETAKFYMIKSFNEDDIHKGIKYDVWTSTPHGNKKLNAAFQ 319
Query: 245 DAEAQFSQTGTMCPVFLFFSVNASRQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWH 304
+AEA+ SQTGT CP+FLFFSVNAS QFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWH
Sbjct: 320 NAEAKLSQTGTQCPIFLFFSVNASGQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWH 379
Query: 305 IIKDVPNNKFVHIILQNNDNRPVTFSRDTQEIGLKEGLEMLSIFKSYSAKTSLLDDFDFY 364
IIKDVPN +F HI LQ N+N+ VTFSRDTQEI LKEGLEML IFKSY AKTSLLDDFDFY
Sbjct: 380 IIKDVPNRQFAHITLQINENKCVTFSRDTQEITLKEGLEMLKIFKSYPAKTSLLDDFDFY 439
Query: 365 ENREKLFRSQKSTKHTSPKPQXXXXXXXXXXXXXXXXXTVEAREKKIEMQSSGGTKQFNL 424
ENREKL RSQ+ T+HT K + T++AREK+IEMQSS GT Q L
Sbjct: 440 ENREKLCRSQR-TEHTGWKQE--------AYNNDSYHNTMKAREKRIEMQSS-GTNQETL 489
Query: 425 IKLTKNLSLSPSETQLSEKQLHGFR 449
+ LTKNLSL+PSE Q +Q GFR
Sbjct: 490 VNLTKNLSLNPSERQGFRRQ--GFR 512
>Medtr2g063460.1 | evolutionarily carboxy-terminal region protein |
HC | chr2:26745358-26750617 | 20130731
Length = 584
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 168/217 (77%), Gaps = 4/217 (1%)
Query: 163 EMTRGPRGQYNNVQLQPPAVNDELAV----MLRRDQYNLPDFQTEYETAKFYLIKSFNED 218
E +GPR L +++ +V +R DQYNLPDF T+Y+ A F++IKS++ED
Sbjct: 326 EQNQGPRTANAKGTLNSGGNSEDKSVNGNTKIRTDQYNLPDFPTKYDHALFFVIKSYSED 385
Query: 219 DIHKSVKYDVWTSTPNGNKKLNAAFHDAEAQFSQTGTMCPVFLFFSVNASRQFVGVAEML 278
D+HKS+KYDVW STPNGNK+L+ AF DA+ + + G+ CPVFLFFSVNAS QF GVAEM+
Sbjct: 386 DVHKSIKYDVWASTPNGNKRLDNAFQDAQNRMEEKGSKCPVFLFFSVNASGQFCGVAEMI 445
Query: 279 GPVDFKKDMKFWKLDKYNGFFPIKWHIIKDVPNNKFVHIILQNNDNRPVTFSRDTQEIGL 338
G VDF K M FW+ DK+NG+FP+KWHIIKD+PN + HIIL+NND++PVT SRDTQEI
Sbjct: 446 GRVDFNKSMDFWQQDKWNGYFPVKWHIIKDIPNPQLRHIILENNDHKPVTNSRDTQEIHF 505
Query: 339 KEGLEMLSIFKSYSAKTSLLDDFDFYENREKLFRSQK 375
+G+EML+IFK+Y ++TS+LDDFDFYE+R+K+ + +K
Sbjct: 506 PQGIEMLNIFKNYVSRTSILDDFDFYESRQKVMQEKK 542
>Medtr2g063460.2 | evolutionarily carboxy-terminal region protein |
HC | chr2:26745358-26750617 | 20130731
Length = 582
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 144/294 (48%), Positives = 198/294 (67%), Gaps = 12/294 (4%)
Query: 86 NKAPPLYPNFTAATPPRTYHQMGKVSSFSNPKHHFFPPTNYRPNTSTNYRSNGGVSSVND 145
NKA P + P+ + K S+++ K F P N PN + G VS+ +
Sbjct: 255 NKASISGPVLHSDAMPKGSFPVAKFSAYNQGKSGF-PYQNNFPNMKAT-STKGWVST--E 310
Query: 146 RFLLSDKFQSGESEMSMEMTRGPRGQYNNVQLQPPAVNDELAV----MLRRDQYNLPDFQ 201
+ L K +E + +GPR L +++ +V +R DQYNLPDF
Sbjct: 311 KLKLRSKVNDSLNEQN----QGPRTANAKGTLNSGGNSEDKSVNGNTKIRTDQYNLPDFP 366
Query: 202 TEYETAKFYLIKSFNEDDIHKSVKYDVWTSTPNGNKKLNAAFHDAEAQFSQTGTMCPVFL 261
T+Y+ A F++IKS++EDD+HKS+KYDVW STPNGNK+L+ AF DA+ + + G+ CPVFL
Sbjct: 367 TKYDHALFFVIKSYSEDDVHKSIKYDVWASTPNGNKRLDNAFQDAQNRMEEKGSKCPVFL 426
Query: 262 FFSVNASRQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWHIIKDVPNNKFVHIILQN 321
FFSVNAS QF GVAEM+G VDF K M FW+ DK+NG+FP+KWHIIKD+PN + HIIL+N
Sbjct: 427 FFSVNASGQFCGVAEMIGRVDFNKSMDFWQQDKWNGYFPVKWHIIKDIPNPQLRHIILEN 486
Query: 322 NDNRPVTFSRDTQEIGLKEGLEMLSIFKSYSAKTSLLDDFDFYENREKLFRSQK 375
ND++PVT SRDTQEI +G+EML+IFK+Y ++TS+LDDFDFYE+R+K+ + +K
Sbjct: 487 NDHKPVTNSRDTQEIHFPQGIEMLNIFKNYVSRTSILDDFDFYESRQKVMQEKK 540
>Medtr2g032660.1 | evolutionarily carboxy-terminal region protein |
HC | chr2:12289044-12294565 | 20130731
Length = 694
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 122/221 (55%), Positives = 163/221 (73%), Gaps = 7/221 (3%)
Query: 163 EMTRGPRGQYNNVQLQPPAV-------NDELAVMLRRDQYNLPDFQTEYETAKFYLIKSF 215
+ RGPR + QL A N++ ++++ DQYN DF +Y+ AKF++IKS+
Sbjct: 315 DQNRGPRTSRSKHQLSVKAYTTKVGGGNEQDSIIIYTDQYNKEDFPLDYDNAKFFVIKSY 374
Query: 216 NEDDIHKSVKYDVWTSTPNGNKKLNAAFHDAEAQFSQTGTMCPVFLFFSVNASRQFVGVA 275
+EDD+HKS+KY+VW+ST +GN+KL A+ D + ++ +CP+FLFFSVNAS QF GVA
Sbjct: 375 SEDDVHKSIKYNVWSSTVHGNRKLGNAYEDTKKVSAEKSGVCPIFLFFSVNASGQFCGVA 434
Query: 276 EMLGPVDFKKDMKFWKLDKYNGFFPIKWHIIKDVPNNKFVHIILQNNDNRPVTFSRDTQE 335
EM+G VDF KDM FW+ DK++G FP+KWHIIKDVPN F HIIL NN+N+PVT SRDTQE
Sbjct: 435 EMIGSVDFNKDMDFWQQDKWSGSFPVKWHIIKDVPNPNFRHIILDNNENKPVTNSRDTQE 494
Query: 336 IGLKEGLEMLSIFKSYSAKTSLLDDFDFYENREKLFRSQKS 376
I +GLEML IFK+++ KTSLLDDF +YENR+K+ QK+
Sbjct: 495 IMYSKGLEMLKIFKNHTLKTSLLDDFMYYENRQKIMHDQKA 535
>Medtr4g123630.1 | evolutionarily carboxy-terminal region protein |
HC | chr4:50901357-50896559 | 20130731
Length = 651
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 117/188 (62%), Positives = 152/188 (80%)
Query: 189 MLRRDQYNLPDFQTEYETAKFYLIKSFNEDDIHKSVKYDVWTSTPNGNKKLNAAFHDAEA 248
++ DQYN DF + E AKF++IKS++EDD+HKS+KY+VW+STP+GNKKL +A+ DA
Sbjct: 314 IIYTDQYNREDFPIDNEIAKFFVIKSYSEDDVHKSIKYNVWSSTPHGNKKLQSAYEDARR 373
Query: 249 QFSQTGTMCPVFLFFSVNASRQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWHIIKD 308
+ + CP+FLFFSVNAS QF GVAEM+GPVDF KDM FW+ DK++G FP+KWHIIKD
Sbjct: 374 KATGKSGGCPIFLFFSVNASGQFCGVAEMVGPVDFNKDMDFWQQDKWSGSFPVKWHIIKD 433
Query: 309 VPNNKFVHIILQNNDNRPVTFSRDTQEIGLKEGLEMLSIFKSYSAKTSLLDDFDFYENRE 368
VPN F HIIL+NN+ +PVT SRDTQEI ++GLEML IFK+Y+ KTSLLDDF +YENR+
Sbjct: 434 VPNGNFRHIILENNEFKPVTNSRDTQEIMYRKGLEMLKIFKNYTLKTSLLDDFIYYENRQ 493
Query: 369 KLFRSQKS 376
K+ + +K+
Sbjct: 494 KVMQEEKT 501
>Medtr4g005110.1 | evolutionarily carboxy-terminal region protein |
HC | chr4:57104-67136 | 20130731
Length = 642
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 120/235 (51%), Positives = 170/235 (72%), Gaps = 10/235 (4%)
Query: 156 GESEMSMEMTRGPRGQY--NNVQLQPPAV----NDELAVMLRRDQYNLPDFQTEYETAKF 209
G ++ E RGPR N++ + A+ N+ + + N PDF T+++ AKF
Sbjct: 338 GTLDILSEQNRGPRASKLKNHISSENNAIDGSKNNASTAKFQDESLNRPDFATDFKDAKF 397
Query: 210 YLIKSFNEDDIHKSVKYDVWTSTPNGNKKLNAAFHDAEAQFSQTGTMCPVFLFFSVNASR 269
++IKS++ED++HKS+KY VW STPNGN+KL+AA+ Q + C +FLFFSVNAS
Sbjct: 398 FVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAY----CQAKEKQDACRIFLFFSVNASA 453
Query: 270 QFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWHIIKDVPNNKFVHIILQNNDNRPVTF 329
QF GVAEM+GPV+F K + FW+ DK++G FP+KWHIIKDVPN++F HI+L+NNDN+PVT
Sbjct: 454 QFCGVAEMVGPVNFDKSVDFWQQDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKPVTN 513
Query: 330 SRDTQEIGLKEGLEMLSIFKSYSAKTSLLDDFDFYENREKLFRSQKSTKHTSPKP 384
SRDTQE+ L++G+EML+IFK+Y TS+LDDFDFYE+R+K + +K+ + +S P
Sbjct: 514 SRDTQEVKLQQGIEMLTIFKNYETDTSILDDFDFYEDRQKAMQERKARQQSSIMP 568
>Medtr8g088390.1 | evolutionarily carboxy-terminal region protein |
HC | chr8:36620729-36616338 | 20130731
Length = 670
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 144/188 (76%), Gaps = 4/188 (2%)
Query: 192 RDQYNLPDFQTEYETAKFYLIKSFNEDDIHKSVKYDVWTSTPNGNKKLNAAFHDAEAQFS 251
R+QYN DF EY AKF++IKS++EDDIHKS+KY+VW ST NGNKKL+AA+ +A+
Sbjct: 406 REQYNKADFPEEYTDAKFFVIKSYSEDDIHKSIKYNVWASTQNGNKKLDAAYQEAQ---- 461
Query: 252 QTGTMCPVFLFFSVNASRQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWHIIKDVPN 311
Q CP+FL FSVN S QFVG+AEM GPVDF K +++W+ DK+ G FP+KWHI+KDVPN
Sbjct: 462 QKSGGCPIFLLFSVNTSGQFVGLAEMTGPVDFNKSLEYWQQDKWMGCFPLKWHIVKDVPN 521
Query: 312 NKFVHIILQNNDNRPVTFSRDTQEIGLKEGLEMLSIFKSYSAKTSLLDDFDFYENREKLF 371
N HI L+NN+N+PVT SRDTQEI L+ GL++L IFK YS+KT +LDDF FYE R+K
Sbjct: 522 NVLRHITLENNENKPVTNSRDTQEIMLEPGLKLLKIFKEYSSKTCILDDFGFYEGRQKTI 581
Query: 372 RSQKSTKH 379
+K+ +
Sbjct: 582 LEKKAKQQ 589
>Medtr8g088390.2 | evolutionarily carboxy-terminal region protein |
HC | chr8:36620643-36616338 | 20130731
Length = 605
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 144/188 (76%), Gaps = 4/188 (2%)
Query: 192 RDQYNLPDFQTEYETAKFYLIKSFNEDDIHKSVKYDVWTSTPNGNKKLNAAFHDAEAQFS 251
R+QYN DF EY AKF++IKS++EDDIHKS+KY+VW ST NGNKKL+AA+ +A+
Sbjct: 341 REQYNKADFPEEYTDAKFFVIKSYSEDDIHKSIKYNVWASTQNGNKKLDAAYQEAQ---- 396
Query: 252 QTGTMCPVFLFFSVNASRQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWHIIKDVPN 311
Q CP+FL FSVN S QFVG+AEM GPVDF K +++W+ DK+ G FP+KWHI+KDVPN
Sbjct: 397 QKSGGCPIFLLFSVNTSGQFVGLAEMTGPVDFNKSLEYWQQDKWMGCFPLKWHIVKDVPN 456
Query: 312 NKFVHIILQNNDNRPVTFSRDTQEIGLKEGLEMLSIFKSYSAKTSLLDDFDFYENREKLF 371
N HI L+NN+N+PVT SRDTQEI L+ GL++L IFK YS+KT +LDDF FYE R+K
Sbjct: 457 NVLRHITLENNENKPVTNSRDTQEIMLEPGLKLLKIFKEYSSKTCILDDFGFYEGRQKTI 516
Query: 372 RSQKSTKH 379
+K+ +
Sbjct: 517 LEKKAKQQ 524
>Medtr7g085500.1 | evolutionarily carboxy-terminal region protein |
HC | chr7:33129897-33124920 | 20130731
Length = 659
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/267 (44%), Positives = 167/267 (62%), Gaps = 33/267 (12%)
Query: 134 YRSNGGVSSVNDRFLLSDKFQSGESEMSMEMTRGPRGQYNN----------------VQL 177
YR+ G ND D F E+ +GPR ++ Q
Sbjct: 350 YRATGNGYVANDSRRNGDGFS--------ELNKGPRAAKSSDNKSVKSPEPVTLLLKGQN 401
Query: 178 QPPAVNDELA-VMLRRDQYNLPDFQTEYETAKFYLIKSFNEDDIHKSVKYDVWTSTPNGN 236
P +DE+ ++L ++QYN D Y AKF++IKS++EDD+HKS+KY VW STPNGN
Sbjct: 402 LPVKSDDEVVPLVLNKEQYNGEDLSENYSDAKFFIIKSYSEDDVHKSIKYSVWASTPNGN 461
Query: 237 KKLNAAFHDAEAQFSQTGTMCPVFLFFSVNASRQFVGVAEMLGPVDFKKDMKFWKLDKYN 296
KKL+AA+ +A CP+FL FSVN S QFVG+AEM GPVDF K +++W+ D++
Sbjct: 462 KKLDAAYQEAGG--------CPIFLLFSVNTSGQFVGLAEMTGPVDFDKTVEYWQQDRWT 513
Query: 297 GFFPIKWHIIKDVPNNKFVHIILQNNDNRPVTFSRDTQEIGLKEGLEMLSIFKSYSAKTS 356
G F +KWHIIKD+PN HI L+NN+N+PVT SRDTQE+ ++G++++ IFK +++KTS
Sbjct: 514 GCFNVKWHIIKDIPNGVLRHITLENNENKPVTNSRDTQEVKFEKGVQIVKIFKEHASKTS 573
Query: 357 LLDDFDFYENREKLFRSQKSTKHTSPK 383
+LDDF FYE+REK + +K + PK
Sbjct: 574 ILDDFGFYESREKTTQERKFKEQQLPK 600
>Medtr6g032970.1 | evolutionarily carboxy-terminal region protein |
HC | chr6:10204106-10209200 | 20130731
Length = 642
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/237 (48%), Positives = 160/237 (67%), Gaps = 22/237 (9%)
Query: 163 EMTRGPRG-----QYNNVQLQP----------PAVND---ELAVMLRRDQYNLPDFQTEY 204
E+ +GPRG N+ L P P +D E+ + + QY D Y
Sbjct: 340 ELNKGPRGSNSSDDKNDKSLGPVTLLLKGQDLPIKSDDDKEVHPVPDKQQYTGEDLSENY 399
Query: 205 ETAKFYLIKSFNEDDIHKSVKYDVWTSTPNGNKKLNAAFHDAEAQFSQTGTMCPVFLFFS 264
AKF++IKS++EDDIHKS+KY+VWTSTPNGNKKL+AA+ +A+ + + CP+FL FS
Sbjct: 400 SDAKFFVIKSYSEDDIHKSMKYNVWTSTPNGNKKLDAAYLEAKEKSAD----CPIFLLFS 455
Query: 265 VNASRQFVGVAEMLGPVDFKKDMKFWKLDKYNGFFPIKWHIIKDVPNNKFVHIILQNNDN 324
VN S QFVG+AEM+ PVDF + +++W+ D++ G F +KW IIKD+PNN HI L+NN+N
Sbjct: 456 VNTSGQFVGLAEMVSPVDFDRTVEYWQQDRWTGCFSVKWRIIKDIPNNVLRHITLENNEN 515
Query: 325 RPVTFSRDTQEIGLKEGLEMLSIFKSYSAKTSLLDDFDFYENREKLFRSQKSTKHTS 381
+PVT SRDTQE+ ++G+E+L IFK +S+KT +LDDF FYE REK + +K+ + S
Sbjct: 516 KPVTNSRDTQEVKFEKGVEILKIFKEHSSKTCILDDFAFYEAREKTIQEKKAKEQLS 572
>Medtr2g029540.1 | cleavage and polyadenylation specificity factor
CPSF30 | HC | chr2:11072135-11082678 | 20130731
Length = 683
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 14/146 (9%)
Query: 207 AKFYLIKSFNEDDIHKSVKYDVWTSTPNGNKKLNAAFHDAEAQFSQTGTMCPVFLFFSVN 266
++++++KS N +++ SV+ VW + + KLN AF E V L FSVN
Sbjct: 259 SRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVEN----------VILIFSVN 308
Query: 267 ASRQFVGVAEMLGPVDFKKDMKFWK----LDKYNGFFPIKWHIIKDVPNNKFVHIILQNN 322
+R F G A+M + WK Y F +KW + ++ +K H+ N
Sbjct: 309 RTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYN 368
Query: 323 DNRPVTFSRDTQEIGLKEGLEMLSIF 348
+N PV SRD QE+ G ++ S+
Sbjct: 369 ENLPVKISRDCQELEPSIGEQLASLL 394