Miyakogusa Predicted Gene

Lj6g3v2274940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2274940.1 Non Characterized Hit- tr|F6GYS5|F6GYS5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,39.26,0.000002,FAMILY NOT NAMED,NULL; TCP,Transcription factor,
TCP; TCP,Transcription factor TCP subgroup; seg,NUL,CUFF.61004.1
         (491 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g006150.1 | TCP family transcription factor | HC | chr2:47...   358   9e-99
Medtr2g006150.2 | TCP family transcription factor | HC | chr2:47...   345   6e-95
Medtr5g039600.1 | TCP family transcription factor | HC | chr5:17...   169   8e-42
Medtr4g108370.1 | TCP family transcription factor | HC | chr4:44...   145   1e-34
Medtr1g114380.1 | TCP family transcription factor | HC | chr1:51...   135   1e-31
Medtr7g028160.1 | TCP family transcription factor | HC | chr7:94...   134   2e-31
Medtr8g033070.1 | TCP family transcription factor | HC | chr8:12...   133   4e-31
Medtr1g101810.4 | TCP family transcription factor | HC | chr1:45...   133   5e-31
Medtr1g101810.3 | TCP family transcription factor | HC | chr1:45...   133   5e-31
Medtr1g101810.2 | TCP family transcription factor | HC | chr1:45...   133   5e-31
Medtr1g101810.1 | TCP family transcription factor | HC | chr1:45...   132   6e-31
Medtr1g038650.1 | TCP family transcription factor | HC | chr1:14...   129   9e-30
Medtr1g038650.2 | TCP family transcription factor | HC | chr1:14...   129   9e-30
Medtr1g063870.1 | TCP family transcription factor | HC | chr1:28...   125   1e-28

>Medtr2g006150.1 | TCP family transcription factor | HC |
           chr2:471446-468724 | 20130731
          Length = 487

 Score =  358 bits (918), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 244/483 (50%), Positives = 270/483 (55%), Gaps = 67/483 (13%)

Query: 39  FDGRQSAPFIMGSMS-IQAGLTTTXXXXXXXXXXXXXXXXXXXXXXXXXQLIDASLAIAT 97
           FDGR S PFIMGS+S IQ    ++                          LIDASLAIAT
Sbjct: 42  FDGRPS-PFIMGSISNIQPSSNSSPSNSSSSSASASASASAPTQ-----HLIDASLAIAT 95

Query: 98  RSDPP-----THQLXXXXXXXXXXXXXXXXXKRSTKDRHTKVDGRGRRIRMPATCAARVF 152
           RS+PP      +Q+                 KRSTKDRHTKVDGRGRRIRMPATCAARVF
Sbjct: 96  RSEPPLPDVSNNQIQPFSSTSTTVTAVANPPKRSTKDRHTKVDGRGRRIRMPATCAARVF 155

Query: 153 QLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKS 212
           QLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKS
Sbjct: 156 QLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKS 215

Query: 213 APHTFHGAALGLAHQSYEEAFQQHTPMLGFHHHRQQ---LMSADQISEALPGDSSENYMR 269
           AP +FH +AL LAH  YEEA  QH P+LGFH H+     LM+ADQI EAL   S+ENYMR
Sbjct: 216 APLSFH-SALALAHHPYEEAAYQHAPLLGFHPHQHHQQQLMNADQIGEAL---SNENYMR 271

Query: 270 KRYREDLFKDDANNQSSQQNETGDGPSSPKQFKPDXXXX-----------------XXXX 312
           KRYREDLFK+D NNQ+ +    GDG SSPK FK +                         
Sbjct: 272 KRYREDLFKEDNNNQN-ESGGDGDGSSSPKSFKTNHQQQDDMGEGDGGGGGASSSSSIGN 330

Query: 313 XXXXLLRPSNLLXXXXXXXXXXXXXXTVG-GSTIWMLPVTAGGAVNSASDNQHTMWPFX- 370
               LLRPSN+L              T G GSTIWM+PV+ G A +++      MWPF  
Sbjct: 331 SFSGLLRPSNMLPATAMWA-------TAGSGSTIWMVPVSGGAATSNSETQTQNMWPFNP 383

Query: 371 --XXXXXXXXXXXXXXLHFMQRFNLPTGGVGVEFXXXXXXXXXXXXMYQPPSQHLGLAMS 428
                           LHFM RFN+P  G GVEF             YQ PSQHLGLA+S
Sbjct: 384 HVQSQNQGNAAVTPSQLHFMPRFNVPASG-GVEFQGGRGGLQLGSA-YQ-PSQHLGLAVS 440

Query: 429 DSNLGMLAALXXXXXXXXXXXXXXXXSDXXXXXXXXXXXXXXXXXXPQPTTDSGGEDGPN 488
           DSN+GM AAL                SD                  PQP  D  GED PN
Sbjct: 441 DSNMGMFAAL--NAYNRAAHFNVNNSSD-------------HHQQQPQP-NDESGEDAPN 484

Query: 489 SSQ 491
           +SQ
Sbjct: 485 TSQ 487


>Medtr2g006150.2 | TCP family transcription factor | HC |
           chr2:471446-468724 | 20130731
          Length = 447

 Score =  345 bits (885), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 226/425 (53%), Positives = 251/425 (59%), Gaps = 51/425 (12%)

Query: 39  FDGRQSAPFIMGSMS-IQAGLTTTXXXXXXXXXXXXXXXXXXXXXXXXXQLIDASLAIAT 97
           FDGR S PFIMGS+S IQ    ++                          LIDASLAIAT
Sbjct: 42  FDGRPS-PFIMGSISNIQPSSNSSPSNSSSSSASASASASAPTQ-----HLIDASLAIAT 95

Query: 98  RSDPP-----THQLXXXXXXXXXXXXXXXXXKRSTKDRHTKVDGRGRRIRMPATCAARVF 152
           RS+PP      +Q+                 KRSTKDRHTKVDGRGRRIRMPATCAARVF
Sbjct: 96  RSEPPLPDVSNNQIQPFSSTSTTVTAVANPPKRSTKDRHTKVDGRGRRIRMPATCAARVF 155

Query: 153 QLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKS 212
           QLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKS
Sbjct: 156 QLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKS 215

Query: 213 APHTFHGAALGLAHQSYEEAFQQHTPMLGFHHHRQQ---LMSADQISEALPGDSSENYMR 269
           AP +FH +AL LAH  YEEA  QH P+LGFH H+     LM+ADQI EAL   S+ENYMR
Sbjct: 216 APLSFH-SALALAHHPYEEAAYQHAPLLGFHPHQHHQQQLMNADQIGEAL---SNENYMR 271

Query: 270 KRYREDLFKDDANNQSSQQNETGDGPSSPKQFKPDXXXX-----------------XXXX 312
           KRYREDLFK+D NNQ+ +    GDG SSPK FK +                         
Sbjct: 272 KRYREDLFKEDNNNQN-ESGGDGDGSSSPKSFKTNHQQQDDMGEGDGGGGGASSSSSIGN 330

Query: 313 XXXXLLRPSNLLXXXXXXXXXXXXXXTVG-GSTIWMLPVTAGGAVNSASDNQHTMWPFX- 370
               LLRPSN+L              T G GSTIWM+PV+ G A +++      MWPF  
Sbjct: 331 SFSGLLRPSNMLPATAMWA-------TAGSGSTIWMVPVSGGAATSNSETQTQNMWPFNP 383

Query: 371 --XXXXXXXXXXXXXXLHFMQRFNLPTGGVGVEFXXXXXXXXXXXXMYQPPSQHLGLAMS 428
                           LHFM RFN+P  G GVEF             YQ PSQHLGLA+S
Sbjct: 384 HVQSQNQGNAAVTPSQLHFMPRFNVPASG-GVEFQGGRGGLQLGSA-YQ-PSQHLGLAVS 440

Query: 429 DSNLG 433
           DSN+ 
Sbjct: 441 DSNMA 445


>Medtr5g039600.1 | TCP family transcription factor | HC |
           chr5:17429938-17427951 | 20130731
          Length = 416

 Score =  169 bits (427), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 80/96 (83%), Positives = 86/96 (89%), Gaps = 5/96 (5%)

Query: 124 KRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATG 183
           + STKDRHTKVDGRGRRIRMPA CAARVFQLTRELGHKSDGETIEWLLQQAEPA+IAATG
Sbjct: 64  RASTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATG 123

Query: 184 TGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHTFHG 219
           TGTIPANF++LN+SLRSSGST+SAP      H F G
Sbjct: 124 TGTIPANFTSLNISLRSSGSTMSAP-----SHYFRG 154


>Medtr4g108370.1 | TCP family transcription factor | HC |
           chr4:44961490-44959266 | 20130731
          Length = 437

 Score =  145 bits (366), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 65/73 (89%), Positives = 71/73 (97%)

Query: 124 KRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATG 183
           + STKDRHTKV+GRGRRIRMPA CAARVFQLTRELGHKSDGETIEWLLQQAEPA+IAATG
Sbjct: 94  RTSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATG 153

Query: 184 TGTIPANFSTLNV 196
           TGTIPANF++LN+
Sbjct: 154 TGTIPANFTSLNI 166


>Medtr1g114380.1 | TCP family transcription factor | HC |
           chr1:51614461-51616519 | 20130731
          Length = 257

 Score =  135 bits (339), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 63/76 (82%), Positives = 70/76 (92%)

Query: 124 KRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATG 183
           K   KDRH+KVDGRGRRIRMP  CAARVFQLTRELGHKSDG+TIEWLL+QAEP+IIAATG
Sbjct: 30  KPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATG 89

Query: 184 TGTIPANFSTLNVSLR 199
           TGT PA+FS+L+VSLR
Sbjct: 90  TGTTPASFSSLSVSLR 105


>Medtr7g028160.1 | TCP family transcription factor | HC |
           chr7:9485316-9483450 | 20130731
          Length = 284

 Score =  134 bits (336), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/153 (49%), Positives = 101/153 (66%), Gaps = 8/153 (5%)

Query: 124 KRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATG 183
           + S KDRHTKV+GRGRRIRMPA CAAR+FQLTRELGHKSDGETI+WLLQQ+EP+IIAATG
Sbjct: 47  RTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATG 106

Query: 184 TGTIPAN-FSTLNVSLRSSGSTLSAPPSKSAPHTFHGAALGLAHQSYEEAFQQHTPMLGF 242
           TGTIPA+  ++   +L   GS+LS+    +  +T+  A    AHQ+++      T +   
Sbjct: 107 TGTIPASALASSGNTLTPQGSSLSSGLQLNDRNTW--AQTHQAHQAHQGHHVSSTSLWPH 164

Query: 243 HH-----HRQQLMSADQISEALPGDSSENYMRK 270
           HH       Q   S   ++  +  ++S NY +K
Sbjct: 165 HHVGGFGFHQSSSSGGLVATTVGENNSGNYFQK 197


>Medtr8g033070.1 | TCP family transcription factor | HC |
           chr8:12681955-12683583 | 20130731
          Length = 333

 Score =  133 bits (334), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 60/76 (78%), Positives = 69/76 (90%)

Query: 124 KRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATG 183
           + STKDRHTKV+GRGRRIRMPATCAAR+FQLTRELGHKSDGETI WLL+ AEPAIIAATG
Sbjct: 77  RSSTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATG 136

Query: 184 TGTIPANFSTLNVSLR 199
           TGT+PA   ++N +L+
Sbjct: 137 TGTVPAIAMSVNGTLK 152


>Medtr1g101810.4 | TCP family transcription factor | HC |
           chr1:45965204-45966803 | 20130731
          Length = 337

 Score =  133 bits (334), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 76/91 (83%)

Query: 124 KRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATG 183
           KRS+KDRHTKV+GRGRRIR+PATCAAR+FQLTRELGHKSDGETI WLL+QAEP+II ATG
Sbjct: 61  KRSSKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLEQAEPSIIEATG 120

Query: 184 TGTIPANFSTLNVSLRSSGSTLSAPPSKSAP 214
           TGT+PA   ++  +L+   S+ + P  + AP
Sbjct: 121 TGTVPAIAVSVGGTLKIPTSSPARPDGEDAP 151


>Medtr1g101810.3 | TCP family transcription factor | HC |
           chr1:45965204-45966803 | 20130731
          Length = 337

 Score =  133 bits (334), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 76/91 (83%)

Query: 124 KRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATG 183
           KRS+KDRHTKV+GRGRRIR+PATCAAR+FQLTRELGHKSDGETI WLL+QAEP+II ATG
Sbjct: 61  KRSSKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLEQAEPSIIEATG 120

Query: 184 TGTIPANFSTLNVSLRSSGSTLSAPPSKSAP 214
           TGT+PA   ++  +L+   S+ + P  + AP
Sbjct: 121 TGTVPAIAVSVGGTLKIPTSSPARPDGEDAP 151


>Medtr1g101810.2 | TCP family transcription factor | HC |
           chr1:45965204-45966803 | 20130731
          Length = 337

 Score =  133 bits (334), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 76/91 (83%)

Query: 124 KRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATG 183
           KRS+KDRHTKV+GRGRRIR+PATCAAR+FQLTRELGHKSDGETI WLL+QAEP+II ATG
Sbjct: 61  KRSSKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLEQAEPSIIEATG 120

Query: 184 TGTIPANFSTLNVSLRSSGSTLSAPPSKSAP 214
           TGT+PA   ++  +L+   S+ + P  + AP
Sbjct: 121 TGTVPAIAVSVGGTLKIPTSSPARPDGEDAP 151


>Medtr1g101810.1 | TCP family transcription factor | HC |
           chr1:45965265-45966764 | 20130731
          Length = 367

 Score =  132 bits (333), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 76/91 (83%)

Query: 124 KRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATG 183
           KRS+KDRHTKV+GRGRRIR+PATCAAR+FQLTRELGHKSDGETI WLL+QAEP+II ATG
Sbjct: 91  KRSSKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLEQAEPSIIEATG 150

Query: 184 TGTIPANFSTLNVSLRSSGSTLSAPPSKSAP 214
           TGT+PA   ++  +L+   S+ + P  + AP
Sbjct: 151 TGTVPAIAVSVGGTLKIPTSSPARPDGEDAP 181


>Medtr1g038650.1 | TCP family transcription factor | HC |
           chr1:14250840-14248871 | 20130731
          Length = 235

 Score =  129 bits (323), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 59/72 (81%), Positives = 67/72 (93%)

Query: 124 KRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATG 183
           K  +KDRH+KVDGRGRRIRMP  CAARVFQLTRELGHKSDG+TIEWLL+QAEP+IIAATG
Sbjct: 29  KPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATG 88

Query: 184 TGTIPANFSTLN 195
           TGT PA+FS+L+
Sbjct: 89  TGTTPASFSSLS 100


>Medtr1g038650.2 | TCP family transcription factor | HC |
           chr1:14250840-14248871 | 20130731
          Length = 235

 Score =  129 bits (323), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 59/72 (81%), Positives = 67/72 (93%)

Query: 124 KRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATG 183
           K  +KDRH+KVDGRGRRIRMP  CAARVFQLTRELGHKSDG+TIEWLL+QAEP+IIAATG
Sbjct: 29  KPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATG 88

Query: 184 TGTIPANFSTLN 195
           TGT PA+FS+L+
Sbjct: 89  TGTTPASFSSLS 100


>Medtr1g063870.1 | TCP family transcription factor | HC |
           chr1:28041642-28042798 | 20130731
          Length = 205

 Score =  125 bits (313), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 55/65 (84%), Positives = 62/65 (95%)

Query: 125 RSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGT 184
           RSTKDRHTKV+GRGRR+RMP  CAAR+FQLTRELGH+SDGETIEWLL+ AEP+IIAATGT
Sbjct: 47  RSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGT 106

Query: 185 GTIPA 189
           GT+PA
Sbjct: 107 GTVPA 111