Miyakogusa Predicted Gene
- Lj6g3v2274700.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2274700.1 tr|G7INR2|G7INR2_MEDTR ATP-dependent DNA helicase
Q1 OS=Medicago truncatula GN=MTR_2g006440 PE=4
SV=,81.76,0,DEAD,DNA/RNA helicase, DEAD/DEAH box type, N-terminal;
Helicase_C,Helicase, C-terminal; RQC,RQC doma,gene.g67741.t1.1
(907 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g006440.1 | ATP-dependent DNA helicase RecQ family protein... 1011 0.0
Medtr1g083840.1 | RecQ family ATP-dependent DNA helicase | HC | ... 328 1e-89
Medtr5g026590.1 | ATP-dependent DNA helicase RecQ family protein... 299 8e-81
Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC | ... 259 1e-68
Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC | ... 259 1e-68
Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC | chr3:28... 214 3e-55
Medtr8g080160.1 | RecQ family ATP-dependent DNA helicase | HC | ... 178 3e-44
Medtr1g083250.3 | RecQ family ATP-dependent DNA helicase | HC | ... 129 2e-29
Medtr1g083250.4 | RecQ family ATP-dependent DNA helicase | HC | ... 128 3e-29
Medtr1g083250.2 | RecQ family ATP-dependent DNA helicase | HC | ... 128 3e-29
Medtr1g083250.1 | RecQ family ATP-dependent DNA helicase | HC | ... 128 3e-29
Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like prote... 64 6e-10
Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like prote... 60 7e-09
Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like prote... 59 2e-08
Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like prote... 59 2e-08
Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 59 2e-08
Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 59 3e-08
Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like prote... 59 3e-08
>Medtr2g006440.1 | ATP-dependent DNA helicase RecQ family protein |
HC | chr2:578880-586948 | 20130731
Length = 1159
Score = 1011 bits (2614), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/614 (78%), Positives = 515/614 (83%), Gaps = 15/614 (2%)
Query: 2 AATSFQGSHENNMPRHSDVTTTPIVINHRSQVLDSSVNNHTKYTDQINESTKCMPVHXXX 61
TSFQGS+ENN H DV TP VINH S+V+DS VNNHTKYT Q NESTKC+
Sbjct: 108 TTTSFQGSYENNKLNHPDVAATPTVINHTSRVVDSLVNNHTKYTGQTNESTKCVADTINI 167
Query: 62 XXXXXXXXXXX-QIVEQYQSSCTPQPSMSRLPPITPTADKDNFAGH-DNLLPPELCVDCS 119
QIVE+YQS+CTPQP MS+ PP TPTADKDNFAG D LPPELC++C
Sbjct: 168 DDDDILESMDLDQIVEKYQSTCTPQPPMSKFPPFTPTADKDNFAGQGDTFLPPELCLNCI 227
Query: 120 HGCKLGHCPEAASHLQELKDNLIVISNELLDNVENLSSTDISKLHQDRSQLKKQIQQLEK 179
HG KLG CPEAASHLQE KDNLI ISNEL+DNVENLSS I+KL QDRSQL QIQQLEK
Sbjct: 228 HGYKLGICPEAASHLQEFKDNLIAISNELIDNVENLSSVQIAKLRQDRSQLNNQIQQLEK 287
Query: 180 YIHSSNLAEERQKSHFSASTAPPTSFVYETPRQPFLSSGP------KTYDSQAYMGNGTY 233
YIHSSNL EERQKS+F S APPTSFVYETP++ +SSGP YD Q YM GTY
Sbjct: 288 YIHSSNLEEERQKSNFVTSMAPPTSFVYETPQRNVISSGPVISSGLNRYDDQVYMDYGTY 347
Query: 234 GXXXXXXXXXXXDRYGMPSGPVEREAFIPKNIEVNYIEGSGDKRWSSQDFPWTKDLEVNN 293
G GMPSGPVERE FIPK IEVNYIEGSGDKRWSS+DF WTK+LEVNN
Sbjct: 348 GTSYQSSC-------GMPSGPVEREPFIPKIIEVNYIEGSGDKRWSSRDFSWTKELEVNN 400
Query: 294 KRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 353
K+VFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALI PGITLVISPLVSL
Sbjct: 401 KKVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALINPGITLVISPLVSL 460
Query: 354 IQDQIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQ 413
IQDQIMHLLQANIPA LSAN+EW+EQQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQ
Sbjct: 461 IQDQIMHLLQANIPAAYLSANLEWAEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQ 520
Query: 414 LENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVXXXXXXXXXSVKE 473
LE+LH RELLSRIVIDEAHCVSQWGHDFRPDYQGLG+LKQKFPNTPV SVKE
Sbjct: 521 LESLHGRELLSRIVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNTPVLALTATATASVKE 580
Query: 474 DVVQALGLINCIIFRQSFNRPNLWYSVVPKTKKCVEDIDKFIRENHFDECGIIYCLSRMD 533
DVVQALGL+NC++FRQSFNRPNLWYSVVPKTKKC+EDIDKFIRENHFDECGIIYCLSRMD
Sbjct: 581 DVVQALGLVNCVVFRQSFNRPNLWYSVVPKTKKCLEDIDKFIRENHFDECGIIYCLSRMD 640
Query: 534 CEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMGINKPDVRFV 593
CEKVAEKLQECGHKC +YHG+MDP QRA VQ+QWSKDE+NIICATVAFGMGINKPDVRFV
Sbjct: 641 CEKVAEKLQECGHKCAFYHGSMDPDQRAHVQRQWSKDEINIICATVAFGMGINKPDVRFV 700
Query: 594 IHHSLPKSIEGYHQ 607
IHHSLPKS+EGYHQ
Sbjct: 701 IHHSLPKSVEGYHQ 714
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/327 (63%), Positives = 228/327 (69%), Gaps = 28/327 (8%)
Query: 608 VELIKLTGQRFSSSHILEVYRGSLSQLVKKHRHETVRLHGAGKPLAKGEASRVLHRLVVE 667
VEL+KLTGQ+ S+SHILEVYRGSLSQ+VKKHRHETVRLHGAGK LAKGEASR+LH LVVE
Sbjct: 834 VELVKLTGQKVSASHILEVYRGSLSQMVKKHRHETVRLHGAGKHLAKGEASRILHHLVVE 893
Query: 668 DIILEEVKKSDIYGSVSSVLKVNEHKVRNLLSGGQRIVLRFPSPVKASKHGKCDLTPAKG 727
D I E VKKSD YGSVSSVLKVNE KVRN+L GGQRI+LRFPS VKASK GKCD AKG
Sbjct: 894 DFIAEVVKKSDFYGSVSSVLKVNEQKVRNMLFGGQRIILRFPSSVKASKPGKCDSISAKG 953
Query: 728 PLTSGKLNPPVIDMTDQPQTEVDLNLSAKLYSALRMLRTTLVREAADGVMAYHIFG---- 783
L S KLN P ID+ DQP+TE+DL+LSAKLY+ALRMLRTTL REA +GVMA+HIFG
Sbjct: 954 SLASAKLNLP-IDIPDQPETEIDLDLSAKLYTALRMLRTTLCREAGEGVMAHHIFGNATL 1012
Query: 784 ----------------------TKVSKYGDRLLETIEDTINEYYKLXXXXXXXXXXXXXX 821
TKVSKYGDRLLETI TINEYY
Sbjct: 1013 QQISKKLPRTKEELLDINGISKTKVSKYGDRLLETIAKTINEYYNTDKNSSGSKGSVDSA 1072
Query: 822 KRRREA-ASGDASANAEDDFTKSTGRSKKMTVKRQTKRTEIYDSEEEDYYHGCXXXXXXX 880
KRRREA + D++ +D KSTGRSKK TVKRQ K+ EIY+SEEEDYYHGC
Sbjct: 1073 KRRREANRTPDSNGEDDDALIKSTGRSKKRTVKRQIKKAEIYESEEEDYYHGCLDEDLDC 1132
Query: 881 XXXXXXXXXKTPCTNAGGRVLPQWTGS 907
K TNA GRVLPQWT S
Sbjct: 1133 IDIDNVVLDKLTGTNAAGRVLPQWTAS 1159
>Medtr1g083840.1 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37328725-37334465 | 20130731
Length = 603
Score = 328 bits (841), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 159/331 (48%), Positives = 222/331 (67%), Gaps = 2/331 (0%)
Query: 279 SSQDFPWTKDLEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPAL 338
S ++ D+E+ N +FGN S RP Q + A ++ D F+LMPTGGGKSL YQLPA
Sbjct: 179 SYEELKTLDDIELANVVIFGNKSLRPLQHQACKAALAKQDSFILMPTGGGKSLCYQLPAT 238
Query: 339 ICPGITLVISPLVSLIQDQIMHL-LQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLL 397
+ PG+T+V+SPL+SLIQDQI+ L L+ IPA L++ S+ +L+EL D KLL
Sbjct: 239 LQPGVTVVVSPLLSLIQDQIITLNLKFGIPATFLNSQQNASQAAAVLQELRKDKPSCKLL 298
Query: 398 YVTPEKVARSDVLLRQLENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 457
YVTPE++A + + L+ +H + L+ V+DEAHCVSQWGHDFRPDY+GLG LKQ FP
Sbjct: 299 YVTPERIAGNQSFVGILKCMHQKGQLAGFVVDEAHCVSQWGHDFRPDYRGLGSLKQNFPR 358
Query: 458 TPVXXXXXXXXXSVKEDVVQALGLINCIIFRQSFNRPNLWYSVVPKTKKCVEDIDKFIRE 517
PV V+ED++ AL + + I+ +SF+RPNL Y V+ KTK+ ++ + + + +
Sbjct: 359 VPVMALTATATHPVREDILNALRIPHAIVLERSFDRPNLKYEVIVKTKEPLKQLGQLLMD 418
Query: 518 NHFDECGIIYCLSRMDCEKVAEKLQE-CGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIIC 576
+CGI+YCLS+ +C V++ L E C K YYH + QR VQK+W EV+I+C
Sbjct: 419 RFKSQCGIVYCLSKSECVDVSKFLNEKCKIKAAYYHAGLAARQRVAVQKKWHDGEVHIVC 478
Query: 577 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 607
AT+AFGMGI+K DVRFVIH+++ KSIE Y+Q
Sbjct: 479 ATIAFGMGIDKADVRFVIHNTMSKSIESYYQ 509
>Medtr5g026590.1 | ATP-dependent DNA helicase RecQ family protein |
HC | chr5:10949368-10935495 | 20130731
Length = 685
Score = 299 bits (766), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 158/343 (46%), Positives = 210/343 (61%), Gaps = 36/343 (10%)
Query: 273 SGDKRWSSQDFPWTKDLEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLT 332
+G W SQ DL +N +FG S+R NQ+E+INA +SG DV V+M GGGKSL
Sbjct: 68 NGTFEWDSQ----ADDLRLN---IFGISSYRANQKEIINAILSGRDVLVIMAAGGGKSLC 120
Query: 333 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPAVCLSANIEWSEQ----QEILRELN 388
YQLPA++ G+ LV+SPL+SLIQDQ+M L IPA L++ + Q R
Sbjct: 121 YQLPAVLRNGVALVVSPLLSLIQDQVMGLTALGIPAYMLTSTTSKDNEKVYIQSFWRRAR 180
Query: 389 SDYCKYKLLYVTPEKVARSDVLLRQLENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGL 448
D KLLYVTPEK+ + I EAHC SQWGHDFRPDY+ L
Sbjct: 181 GDL---KLLYVTPEKITKKQE------------------IYEAHCCSQWGHDFRPDYKNL 219
Query: 449 GILKQKFPNTPVXXXXXXXXXSVKEDVVQALGLINCIIFRQSFNRPNLWYSVVPKT---K 505
GILK +FPN P+ V+ D+V+ L + C+ F + NRPNL+Y V K+ K
Sbjct: 220 GILKTQFPNVPMVALTATATQRVQNDLVEMLHIRRCVKFVSTVNRPNLFYMVKEKSSVSK 279
Query: 506 KCVEDIDKFIRENHFD-ECGIIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQ 564
V++I +FI+E++ + E GI+YC SR +CE+VA++L+E G +YH +MD R V
Sbjct: 280 VVVDEIAEFIQESYPNHESGIVYCFSRKECEQVAKELRERGISAGHYHADMDVNDREKVH 339
Query: 565 KQWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 607
+WS +++ +I TVAFGMGINKPDVRFVIHHSL KS+E Y+Q
Sbjct: 340 MRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQ 382
>Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525893-18516340 | 20130731
Length = 727
Score = 259 bits (661), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/314 (41%), Positives = 187/314 (59%), Gaps = 6/314 (1%)
Query: 297 FGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 356
FG FR Q E I A +SG D F LMPTGGGKS+ YQ+PAL GI LV+ PL++L+++
Sbjct: 38 FGYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKEGIVLVVCPLIALMEN 97
Query: 357 QIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQLEN 416
Q+M L + I A LS+ + +I +L S +LLYVTPE +A + + +L
Sbjct: 98 QVMALKEKGIAAEFLSSTKTAKAKDKIHEDLGSGKPSTRLLYVTPELIA-TPGFMSKLTK 156
Query: 417 LHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVXXXXXXXXXSVKEDVV 476
+H R LLS I IDEAHC+S WGHDFRP Y+ L L+ P+ P+ V++DVV
Sbjct: 157 IHSRGLLSLIAIDEAHCISSWGHDFRPTYRKLSTLRSHLPDVPILALTATAVPKVQKDVV 216
Query: 477 QALGLINCIIFRQSFNRPNLWYSVVPKTKKCVEDIDKFIRE---NHFDECGIIYCLSRMD 533
++L + N +I + SFNRPN++Y V + K ++D + + + D C IIYCL R
Sbjct: 217 ESLHMQNALILKTSFNRPNIYYEV--RYKDLLDDSYSDLSDRLKSMGDVCAIIYCLERSM 274
Query: 534 CEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMGINKPDVRFV 593
C+ ++ L + G C YH ++ R V W + ++ ATVAFGMGI++ DVR V
Sbjct: 275 CDDLSAHLSQRGISCAAYHAGLNNKMRTSVLHDWISSKTKVVVATVAFGMGIDRKDVRIV 334
Query: 594 IHHSLPKSIEGYHQ 607
H ++PKS+E ++Q
Sbjct: 335 CHFNIPKSMEAFYQ 348
>Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525936-18516322 | 20130731
Length = 728
Score = 259 bits (661), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/314 (41%), Positives = 187/314 (59%), Gaps = 6/314 (1%)
Query: 297 FGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 356
FG FR Q E I A +SG D F LMPTGGGKS+ YQ+PAL GI LV+ PL++L+++
Sbjct: 38 FGYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKEGIVLVVCPLIALMEN 97
Query: 357 QIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQLEN 416
Q+M L + I A LS+ + +I +L S +LLYVTPE +A + + +L
Sbjct: 98 QVMALKEKGIAAEFLSSTKTAKAKDKIHEDLGSGKPSTRLLYVTPELIA-TPGFMSKLTK 156
Query: 417 LHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVXXXXXXXXXSVKEDVV 476
+H R LLS I IDEAHC+S WGHDFRP Y+ L L+ P+ P+ V++DVV
Sbjct: 157 IHSRGLLSLIAIDEAHCISSWGHDFRPTYRKLSTLRSHLPDVPILALTATAVPKVQKDVV 216
Query: 477 QALGLINCIIFRQSFNRPNLWYSVVPKTKKCVEDIDKFIRE---NHFDECGIIYCLSRMD 533
++L + N +I + SFNRPN++Y V + K ++D + + + D C IIYCL R
Sbjct: 217 ESLHMQNALILKTSFNRPNIYYEV--RYKDLLDDSYSDLSDRLKSMGDVCAIIYCLERSM 274
Query: 534 CEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMGINKPDVRFV 593
C+ ++ L + G C YH ++ R V W + ++ ATVAFGMGI++ DVR V
Sbjct: 275 CDDLSAHLSQRGISCAAYHAGLNNKMRTSVLHDWISSKTKVVVATVAFGMGIDRKDVRIV 334
Query: 594 IHHSLPKSIEGYHQ 607
H ++PKS+E ++Q
Sbjct: 335 CHFNIPKSMEAFYQ 348
>Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC |
chr3:28524625-28534220 | 20130731
Length = 908
Score = 214 bits (545), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/317 (37%), Positives = 182/317 (57%), Gaps = 11/317 (3%)
Query: 294 KRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 353
K FG SFRP QREVI + D V+M TG GKSL YQ+P L+ +V+SPL+SL
Sbjct: 9 KDYFGFLSFRPYQREVIEKIIEKRDCLVVMATGSGKSLCYQVPPLVVKKTGIVVSPLISL 68
Query: 354 IQDQIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQ 413
+QDQ+M L Q I A LS S Q++ + ++ ++ +L++TPEK +
Sbjct: 69 MQDQVMALKQRGIKAEYLS-----SAQKDYTVQSKAERGQFDILFMTPEKAC--TIPTSF 121
Query: 414 LENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVXXXXXXXXXSVKE 473
NL ++E +S +DEAHC+S+WGHDFR +Y+ L L+ + P V+
Sbjct: 122 WSNL-LKEGISLFAVDEAHCISEWGHDFRVEYKQLDKLRGVLLDVPYVGLTATATEKVRF 180
Query: 474 DVVQALGLINCIIFRQSFNRPNLWYSV--VPKTKKCVEDIDKFIRENHFDECG-IIYCLS 530
D+ +L + N + SF+RPNL+Y V + + ++++ + + + + C IIYC +
Sbjct: 181 DITNSLKMNNPYVVVGSFDRPNLFYGVKQFNRGQSFIDELVEEVSKEVANGCSTIIYCTT 240
Query: 531 RMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMGINKPDV 590
D E++ + L E G YHG MD R + + +DE+ I+ AT+AFGMGI+KP++
Sbjct: 241 IKDVEQIYKSLTEVGINAGMYHGQMDGKSREESHRLFVRDEMQIMVATIAFGMGIDKPNI 300
Query: 591 RFVIHHSLPKSIEGYHQ 607
R VIH+ PK++E Y+Q
Sbjct: 301 RKVIHYGCPKNLESYYQ 317
>Medtr8g080160.1 | RecQ family ATP-dependent DNA helicase | HC |
chr8:34428957-34437037 | 20130731
Length = 917
Score = 178 bits (451), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 171/318 (53%), Gaps = 12/318 (3%)
Query: 294 KRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 353
K + G SFR Q E I ++G +++PTG GKSL YQL ALI PGITLV+SPLV+L
Sbjct: 269 KLIHGFDSFREGQLEAIKNVLAGKSTMLILPTGAGKSLCYQLSALILPGITLVVSPLVAL 328
Query: 354 IQDQIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQ 413
+ DQ+ L I LS+ + E E L +L K+L+V+PE+ + L
Sbjct: 329 MIDQLRQ-LPPLISGALLSSAQTFEESSETLNQLRQG--TIKVLFVSPERFLNEEFLSVI 385
Query: 414 LENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGL--GILKQKFPNTPVXXXXXXXXXSV 471
L V S +VIDEAHC+S+W H+FRP + L +L + + +
Sbjct: 386 SGGLAV----SLVVIDEAHCISEWSHNFRPSFMRLRASLLHKSLNVGSILAMTATATTTT 441
Query: 472 KEDVVQALGLINCIIFRQSFNRPNLWYSVVPKTKKCVEDIDKFIRENHFDECG--IIYCL 529
+ ++ AL + + + + R NL S V K ++D+ ++ + F E I+YC
Sbjct: 442 LDAIMSALDIPRTNLIQNAHLRDNLCLS-VSLIKNRMKDLLVLMKSSPFAEVKSIIVYCK 500
Query: 530 SRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMGINKPD 589
+ + ++++ L + K YH + +R +VQ+ + +++ ++ ATVAFGMG++K D
Sbjct: 501 FQSETDQISRYLNDNNIKAKSYHSGISAKERGYVQELFGSNKIRVVVATVAFGMGLDKRD 560
Query: 590 VRFVIHHSLPKSIEGYHQ 607
V VIH+SLP S+E Y Q
Sbjct: 561 VGAVIHYSLPGSLEEYVQ 578
>Medtr1g083250.3 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050056-37045638 | 20130731
Length = 614
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 20/227 (8%)
Query: 285 WTKDLEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGIT 344
W + + ++ FG S + Q+E ++A + D VL TG GKSL +Q+PAL+ +
Sbjct: 148 WQQKASILLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSLCFQIPALLTGKVV 207
Query: 345 LVISPLVSLIQDQIMHLLQANIPAVCL-SANIEWSEQQEILRELNSDYCKYKLLYVTPEK 403
+VISPL+SL+ DQ + L + I A L S + + +++ +R + Y ++Y+ PE
Sbjct: 208 VVISPLISLMHDQCLKLTKHGISACFLGSGQPDNTVEKKAMRGM------YSIVYICPET 261
Query: 404 VARSDVLLRQLENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP------- 456
V R L++ L+ L ++ IDE HCVS+WGHDFRP Y L +L++ F
Sbjct: 262 VLR---LIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRLSVLRENFTTGKLKSL 318
Query: 457 --NTPVXXXXXXXXXSVKEDVVQALGLI-NCIIFRQSFNRPNLWYSV 500
+ P+ V+ED++++L L + + SF RPNL + V
Sbjct: 319 KFDIPMMALTATATKRVREDILKSLRLSKDTSVVLTSFFRPNLRFMV 365
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 51/83 (61%)
Query: 525 IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMG 584
IIY +R D ++A+ L + G K Y+ + K++ ++ + ++ AT+AFGMG
Sbjct: 510 IIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGMG 569
Query: 585 INKPDVRFVIHHSLPKSIEGYHQ 607
I+K +VR +IH+ P+S+E Y+Q
Sbjct: 570 IDKSNVRRIIHYGWPQSLEAYYQ 592
>Medtr1g083250.4 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050237-37043472 | 20130731
Length = 768
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 20/227 (8%)
Query: 285 WTKDLEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGIT 344
W + + ++ FG S + Q+E ++A + D VL TG GKSL +Q+PAL+ +
Sbjct: 148 WQQKASILLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSLCFQIPALLTGKVV 207
Query: 345 LVISPLVSLIQDQIMHLLQANIPAVCL-SANIEWSEQQEILRELNSDYCKYKLLYVTPEK 403
+VISPL+SL+ DQ + L + I A L S + + +++ +R + Y ++Y+ PE
Sbjct: 208 VVISPLISLMHDQCLKLTKHGISACFLGSGQPDNTVEKKAMRGM------YSIVYICPET 261
Query: 404 VARSDVLLRQLENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP------- 456
V R L++ L+ L ++ IDE HCVS+WGHDFRP Y L +L++ F
Sbjct: 262 VLR---LIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRLSVLRENFTTGKLKSL 318
Query: 457 --NTPVXXXXXXXXXSVKEDVVQALGLI-NCIIFRQSFNRPNLWYSV 500
+ P+ V+ED++++L L + + SF RPNL + V
Sbjct: 319 KFDIPMMALTATATKRVREDILKSLRLSKDTSVVLTSFFRPNLRFMV 365
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 51/83 (61%)
Query: 525 IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMG 584
IIY +R D ++A+ L + G K Y+ + K++ ++ + ++ AT+AFGMG
Sbjct: 510 IIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGMG 569
Query: 585 INKPDVRFVIHHSLPKSIEGYHQ 607
I+K +VR +IH+ P+S+E Y+Q
Sbjct: 570 IDKSNVRRIIHYGWPQSLEAYYQ 592
>Medtr1g083250.2 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050187-37043472 | 20130731
Length = 768
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 20/227 (8%)
Query: 285 WTKDLEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGIT 344
W + + ++ FG S + Q+E ++A + D VL TG GKSL +Q+PAL+ +
Sbjct: 148 WQQKASILLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSLCFQIPALLTGKVV 207
Query: 345 LVISPLVSLIQDQIMHLLQANIPAVCL-SANIEWSEQQEILRELNSDYCKYKLLYVTPEK 403
+VISPL+SL+ DQ + L + I A L S + + +++ +R + Y ++Y+ PE
Sbjct: 208 VVISPLISLMHDQCLKLTKHGISACFLGSGQPDNTVEKKAMRGM------YSIVYICPET 261
Query: 404 VARSDVLLRQLENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP------- 456
V R L++ L+ L ++ IDE HCVS+WGHDFRP Y L +L++ F
Sbjct: 262 VLR---LIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRLSVLRENFTTGKLKSL 318
Query: 457 --NTPVXXXXXXXXXSVKEDVVQALGLI-NCIIFRQSFNRPNLWYSV 500
+ P+ V+ED++++L L + + SF RPNL + V
Sbjct: 319 KFDIPMMALTATATKRVREDILKSLRLSKDTSVVLTSFFRPNLRFMV 365
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 51/83 (61%)
Query: 525 IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMG 584
IIY +R D ++A+ L + G K Y+ + K++ ++ + ++ AT+AFGMG
Sbjct: 510 IIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGMG 569
Query: 585 INKPDVRFVIHHSLPKSIEGYHQ 607
I+K +VR +IH+ P+S+E Y+Q
Sbjct: 570 IDKSNVRRIIHYGWPQSLEAYYQ 592
>Medtr1g083250.1 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050237-37043455 | 20130731
Length = 876
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 20/227 (8%)
Query: 285 WTKDLEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGIT 344
W + + ++ FG S + Q+E ++A + D VL TG GKSL +Q+PAL+ +
Sbjct: 148 WQQKASILLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSLCFQIPALLTGKVV 207
Query: 345 LVISPLVSLIQDQIMHLLQANIPAVCL-SANIEWSEQQEILRELNSDYCKYKLLYVTPEK 403
+VISPL+SL+ DQ + L + I A L S + + +++ +R + Y ++Y+ PE
Sbjct: 208 VVISPLISLMHDQCLKLTKHGISACFLGSGQPDNTVEKKAMRGM------YSIVYICPET 261
Query: 404 VARSDVLLRQLENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP------- 456
V R L++ L+ L ++ IDE HCVS+WGHDFRP Y L +L++ F
Sbjct: 262 VLR---LIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRLSVLRENFTTGKLKSL 318
Query: 457 --NTPVXXXXXXXXXSVKEDVVQALGLI-NCIIFRQSFNRPNLWYSV 500
+ P+ V+ED++++L L + + SF RPNL + V
Sbjct: 319 KFDIPMMALTATATKRVREDILKSLRLSKDTSVVLTSFFRPNLRFMV 365
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 51/83 (61%)
Query: 525 IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMG 584
IIY +R D ++A+ L + G K Y+ + K++ ++ + ++ AT+AFGMG
Sbjct: 510 IIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGMG 569
Query: 585 INKPDVRFVIHHSLPKSIEGYHQ 607
I+K +VR +IH+ P+S+E Y+Q
Sbjct: 570 IDKSNVRRIIHYGWPQSLEAYYQ 592
>Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:43035445-43041856 | 20130731
Length = 499
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 144/336 (42%), Gaps = 45/336 (13%)
Query: 304 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALI--------CPG---ITLVISP--- 349
P Q + + G D+ + TG GK+L Y LPA++ PG I LV++P
Sbjct: 120 PIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRE 179
Query: 350 -LVSLIQDQIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSD 408
V + Q+ + I + C+ + Q +R+L +++ TP +
Sbjct: 180 LAVQIQQEATKFGASSRIKSTCIYGGVPKGPQ---VRDLQKGV---EIIIATPGR----- 228
Query: 409 VLLRQLENLHVR-ELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVXXXXXXX 467
L+ LE+ H ++ +V+DEA + G D Q I+ Q P+
Sbjct: 229 -LIDMLESNHTNLRRVTYLVLDEADRMLDMGFD----PQIRKIVSQIRPDRQTLYWSATW 283
Query: 468 XXSVKEDVVQALGLINCIIFRQSFNRPN----LWYSVVPKTKKCVEDIDKFIR--ENHFD 521
V++ Q L +I + N + +VP+ +K DK ++ E+ D
Sbjct: 284 PKEVEQLARQFLYNPYKVIIGSEDLKANHAIKQYVDIVPEKQKY----DKLVKLLEDIMD 339
Query: 522 ECGI-IYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVA 580
I I+ ++ C+++ +L+ G HG+ A+R +V ++ + I+ AT
Sbjct: 340 GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDV 399
Query: 581 FGMGINKPDVRFVIHHSLPKSIEGYHQVELIKLTGQ 616
G++ DV++VI++ P S+E Y V I TG+
Sbjct: 400 AARGLDVKDVKYVINYDFPGSLEDY--VHRIGRTGR 433
>Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 625
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 143/334 (42%), Gaps = 41/334 (12%)
Query: 304 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPG-----------ITLVISP--- 349
P Q + ++G D+ + TG GK+L+Y LPA++ + LV++P
Sbjct: 226 PIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVHVSAQPRLVQGEGPVVLVLAPTRE 285
Query: 350 LVSLIQDQIMHL-LQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSD 408
L IQ + M ++NI C+ Q LR +++ TP ++ D
Sbjct: 286 LAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLR------MGVEIVIATPGRLI--D 337
Query: 409 VLLRQLENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVXXXXXXXX 468
+L Q NL + ++ +V+DEA + G F P + I+ Q P+
Sbjct: 338 MLEAQHTNL---QRVTYLVLDEADRMLDMG--FEPQIRK--IVNQIRPDRQTLYWSATWP 390
Query: 469 XSVKEDVVQALGLINCIIFRQSFNRPNLWYSVVPKTKKCVEDIDKF------IRENHFDE 522
V+ Q L ++ + + N + + + V D++K+ ++E
Sbjct: 391 KEVESLARQFLHNPYKVVIGSPYLKAN---QSINQVVEVVTDMEKYNRLIKLLKEVMDGS 447
Query: 523 CGIIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFG 582
+I+ ++ C++V +L+ G HG+ + A+R +V ++ I+ AT
Sbjct: 448 RILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAA 507
Query: 583 MGINKPDVRFVIHHSLPKSIEGYHQVELIKLTGQ 616
G++ D++ V+++ P S+E Y V I TG+
Sbjct: 508 RGLDVKDIKCVVNYDFPSSLEDY--VHRIGRTGR 539
>Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 160/391 (40%), Gaps = 46/391 (11%)
Query: 278 WSSQDFPWTKDLEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPA 337
++S FP EV N G + P Q + + D+ + TG GK+L Y LPA
Sbjct: 166 FASSGFPSEILREVQNA---GFSAPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPA 222
Query: 338 LI-----------CPGITLVISP---LVSLIQDQIMHLLQ-ANIPAVCLSANIEWSEQQE 382
I P + LV+SP L + IQD+ + + + I CL Q
Sbjct: 223 FIHLKRTNNNAKMGPTV-LVLSPTRELATQIQDEAVKFSKTSRIACTCLYGGAPKGPQ-- 279
Query: 383 ILRELNSDYCKYKLLYVTPEKVARSDVLLRQLENLHVRELLSRIVIDEAHCVSQWGHD-- 440
L++++ ++ TP ++ +D+L + +LH +S +V+DEA + G +
Sbjct: 280 -LKDIDR---GADIVVATPGRL--NDILEMRRISLH---QVSYLVLDEADRMLDMGFEPQ 330
Query: 441 FRPDYQGLGILKQK--FPNTPVXXXXXXXXXSVKEDVVQALGLINCIIFRQSFNRPNLWY 498
R G+ +Q F T + V +G ++ ++ +S +
Sbjct: 331 IRKIVNGVPARRQTLMFTATWPKEVRRIAADLLVNPVQVNIGNVDELVANKSITQHIEVL 390
Query: 499 SVVPKTKKCVEDIDKFIRENHFDECGIIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPA 558
+ V K ++ ++ +R II+C ++ C+++A L HG+ A
Sbjct: 391 TYVEKQRR----LETILRSQDQGSKIIIFCSTKKMCDQLARNLTRQ-FGAAAIHGDKSQA 445
Query: 559 QRAFVQKQWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQVELIKLTGQRF 618
R V Q+ ++ AT G++ D+R V++ P +E Y V I TG R
Sbjct: 446 DRDHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDY--VHRIGRTG-RA 502
Query: 619 SSSHILEVYRGSLSQLVKKHRHETVR-LHGA 648
++ I + G KH + ++ L GA
Sbjct: 503 GATGIAYTFFGDQD---AKHASDLIKILEGA 530
>Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 160/391 (40%), Gaps = 46/391 (11%)
Query: 278 WSSQDFPWTKDLEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPA 337
++S FP EV N G + P Q + + D+ + TG GK+L Y LPA
Sbjct: 166 FASSGFPSEILREVQNA---GFSAPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPA 222
Query: 338 LI-----------CPGITLVISP---LVSLIQDQIMHLLQ-ANIPAVCLSANIEWSEQQE 382
I P + LV+SP L + IQD+ + + + I CL Q
Sbjct: 223 FIHLKRTNNNAKMGPTV-LVLSPTRELATQIQDEAVKFSKTSRIACTCLYGGAPKGPQ-- 279
Query: 383 ILRELNSDYCKYKLLYVTPEKVARSDVLLRQLENLHVRELLSRIVIDEAHCVSQWGHD-- 440
L++++ ++ TP ++ +D+L + +LH +S +V+DEA + G +
Sbjct: 280 -LKDIDR---GADIVVATPGRL--NDILEMRRISLH---QVSYLVLDEADRMLDMGFEPQ 330
Query: 441 FRPDYQGLGILKQK--FPNTPVXXXXXXXXXSVKEDVVQALGLINCIIFRQSFNRPNLWY 498
R G+ +Q F T + V +G ++ ++ +S +
Sbjct: 331 IRKIVNGVPARRQTLMFTATWPKEVRRIAADLLVNPVQVNIGNVDELVANKSITQHIEVL 390
Query: 499 SVVPKTKKCVEDIDKFIRENHFDECGIIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPA 558
+ V K ++ ++ +R II+C ++ C+++A L HG+ A
Sbjct: 391 TYVEKQRR----LETILRSQDQGSKIIIFCSTKKMCDQLARNLTRQ-FGAAAIHGDKSQA 445
Query: 559 QRAFVQKQWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQVELIKLTGQRF 618
R V Q+ ++ AT G++ D+R V++ P +E Y V I TG R
Sbjct: 446 DRDHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDY--VHRIGRTG-RA 502
Query: 619 SSSHILEVYRGSLSQLVKKHRHETVR-LHGA 648
++ I + G KH + ++ L GA
Sbjct: 503 GATGIAYTFFGDQD---AKHASDLIKILEGA 530
>Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:10401560-10398230 | 20130731
Length = 538
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 140/359 (38%), Gaps = 53/359 (14%)
Query: 278 WSSQDFPWTKDLEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPA 337
++S + P D + N G P Q + I A + G ++ VL TG GKS ++ +P
Sbjct: 141 FASCNLP---DKLLQNIEAAGYEMPTPVQMQAIPAALVGKNMLVLADTGSGKSASFLIP- 196
Query: 338 LICPGITLVISPLVSLIQDQIMHLLQANIP-AVCLSANIEWSEQQEILRELNSDYCKYK- 395
+IS S ++M++ P A+ L+ E S Q E +L +K
Sbjct: 197 --------IISRCAS---HRLMYVSDNKKPLAMVLTPTRELSIQVEEHAKLLGKGLPFKT 245
Query: 396 LLYVTPEKVARSDVLLRQLENLHVR------ELLSR----------IVIDEAHCVSQWGH 439
L V + +AR ++Q L V +LL++ V+DE C+ Q G
Sbjct: 246 ALVVGGDAMARQLYRIQQGVELIVGTPGRLVDLLTKNEIDLDDVTTFVVDEVDCMLQRG- 304
Query: 440 DFRPD-YQGLGILKQKFPNTPVXXXXXXXXXSVKEDVVQALGLINCIIFRQSFNRPN--- 495
FR Q L Q P E + ++ +I NRPN
Sbjct: 305 -FRDQVLQIFTALSQ-----PQVLMYSATTSDSLEKMANSMAKDTVVITVGEPNRPNKAV 358
Query: 496 ----LWYSVVPKTKKCVEDIDKFIRENHFDECGIIYCLSRMDCEKVAEKLQ-ECGHKCTY 550
+W K +K D + HF +IY SR+ + +A + G K
Sbjct: 359 KQLAIWVESKQKKQKL---FDILKSQKHFKPPVVIYVGSRLGADLLANAITVSTGVKAVS 415
Query: 551 YHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGY-HQV 608
HG +R + + + E ++ AT G G++ VR VI +P SI Y HQ+
Sbjct: 416 IHGEKSMTERREIMQSFMVGEFPVVVATGVLGRGVDLLGVRQVIVFDMPNSINEYVHQI 474
>Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 149/336 (44%), Gaps = 46/336 (13%)
Query: 304 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALIC-----------PGITLVISP--- 349
P Q + + G D+ + TG GK+L Y +PA I P + LV++P
Sbjct: 520 PIQAQTWPIALQGRDIVAIAKTGSGKTLGYLMPAFILLRQRRNNSLNGPTV-LVLAPTRE 578
Query: 350 LVSLIQDQIMHLLQAN-IPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSD 408
L + IQ+++ +++ + CL + Q L+EL+ ++ TP ++ +D
Sbjct: 579 LATQIQEEVFKFARSSRVSCTCLYGGAPKALQ---LKELDRGA---DIVVATPGRL--ND 630
Query: 409 VLLRQLENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVXXXXXXXX 468
+L +++ + ++ S +V+DEA + G F P + I+ + P
Sbjct: 631 IL--EMKKIDFGQV-SLLVLDEADRMLDMG--FEPQIRK--IVNEIPPRRQTLMYTATWP 683
Query: 469 XSVKE-------DVVQA-LGLINCIIFRQSFNRPNLWYSVVPKTKKCVEDIDKFIRENHF 520
V++ + VQ +G ++ + +S + + VVP+ +K +++ +R
Sbjct: 684 KEVRKIAGDLLVNPVQVNIGNVDELAANKSITQ---YVEVVPQMEKQ-RRLEQILRSQER 739
Query: 521 DECGIIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVA 580
II+C ++ C+++A + HG+ +R +V Q+ + I+ AT
Sbjct: 740 GSKIIIFCSTKKLCDQLARSIGRT-FGAAAIHGDKSQGERDWVLGQFRTGKSPILVATDV 798
Query: 581 FGMGINKPDVRFVIHHSLPKSIEGYHQVELIKLTGQ 616
G++ D+R VI++ P +E Y V I TG+
Sbjct: 799 AARGLDIKDIRVVINYDFPNGVEDY--VHRIGRTGR 832
>Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 149/336 (44%), Gaps = 46/336 (13%)
Query: 304 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALIC-----------PGITLVISP--- 349
P Q + + G D+ + TG GK+L Y +PA I P + LV++P
Sbjct: 520 PIQAQTWPIALQGRDIVAIAKTGSGKTLGYLMPAFILLRQRRNNSLNGPTV-LVLAPTRE 578
Query: 350 LVSLIQDQIMHLLQAN-IPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSD 408
L + IQ+++ +++ + CL + Q L+EL+ ++ TP ++ +D
Sbjct: 579 LATQIQEEVFKFARSSRVSCTCLYGGAPKALQ---LKELDRGA---DIVVATPGRL--ND 630
Query: 409 VLLRQLENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVXXXXXXXX 468
+L +++ + ++ S +V+DEA + G F P + I+ + P
Sbjct: 631 IL--EMKKIDFGQV-SLLVLDEADRMLDMG--FEPQIRK--IVNEIPPRRQTLMYTATWP 683
Query: 469 XSVKE-------DVVQA-LGLINCIIFRQSFNRPNLWYSVVPKTKKCVEDIDKFIRENHF 520
V++ + VQ +G ++ + +S + + VVP+ +K +++ +R
Sbjct: 684 KEVRKIAGDLLVNPVQVNIGNVDELAANKSITQ---YVEVVPQMEKQ-RRLEQILRSQER 739
Query: 521 DECGIIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVA 580
II+C ++ C+++A + HG+ +R +V Q+ + I+ AT
Sbjct: 740 GSKIIIFCSTKKLCDQLARSIGRT-FGAAAIHGDKSQGERDWVLGQFRTGKSPILVATDV 798
Query: 581 FGMGINKPDVRFVIHHSLPKSIEGYHQVELIKLTGQ 616
G++ D+R VI++ P +E Y V I TG+
Sbjct: 799 AARGLDIKDIRVVINYDFPNGVEDY--VHRIGRTGR 832