Miyakogusa Predicted Gene

Lj6g3v2274630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2274630.1 tr|G7LIM7|G7LIM7_MEDTR Pheophorbide a oxygenase
OS=Medicago truncatula GN=MTR_8g085840 PE=4 SV=1,81.95,0,no
description,Rieske [2Fe-2S] iron-sulphur domain; PHEOPHORBIDE A
OXYGENASE,NULL; IRON-SULFUR DOMAI,CUFF.61043.1
         (271 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g085840.1 | chlorophyllide A oxygenase | HC | chr8:3559444...   467   e-132
Medtr8g085790.2 | chlorophyllide A oxygenase | HC | chr8:3556849...   455   e-128
Medtr8g085820.1 | chlorophyllide A oxygenase | HC | chr8:3558306...   440   e-124
Medtr8g085790.1 | chlorophyllide A oxygenase | HC | chr8:3556833...   433   e-121
Medtr4g057200.1 | lethal leaf-spot protein, putative | HC | chr4...   172   2e-43
Medtr3g105820.1 | translocon at the inner envelope membrane ofs ...   120   2e-27
Medtr1g030480.1 | chlorophyllide A oxygenase | HC | chr1:1044132...    50   2e-06

>Medtr8g085840.1 | chlorophyllide A oxygenase | HC |
           chr8:35594442-35589475 | 20130731
          Length = 529

 Score =  467 bits (1202), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 218/266 (81%), Positives = 235/266 (88%)

Query: 6   AFSVRSLHIPTPLESSTPLRKSMFLSTQLNPPLSLVHGITSKSKLFTALSPTQLTEESSS 65
           AFSV SLHIP  LE   PL+KSMF ++Q++  L L+ G  SK KLFTALSP+ LTE SSS
Sbjct: 3   AFSVSSLHIPIALEPQIPLKKSMFFNSQVHSTLPLIRGNASKFKLFTALSPSPLTESSSS 62

Query: 66  NNLPEDEPEVEANSEKFDWYSQWYPLMPICDLDKRAPHAKKVLGIDVVVWWDRNEGAWQV 125
           N   +DEPEVE  SEKFDWYSQWYPLMPICDLDKRAPHAKKV+GIDVV+WWDRNE AWQV
Sbjct: 63  NLEVDDEPEVETGSEKFDWYSQWYPLMPICDLDKRAPHAKKVMGIDVVIWWDRNESAWQV 122

Query: 126 FDDACPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPVHTFKKACVA 185
           FDDACPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPP+HT KKACVA
Sbjct: 123 FDDACPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPIHTSKKACVA 182

Query: 186 AYPSTVQNDILWFWPNTDPQYKDIIERKRPPYIPELDDPSYTRLMGNRDITYGYEVLIEN 245
           AYPSTVQNDILWFWPN+DPQYKDII RK PP+IPE+DDPS+T LMGNRDI YGYEVLIEN
Sbjct: 183 AYPSTVQNDILWFWPNSDPQYKDIITRKTPPFIPEIDDPSFTSLMGNRDIAYGYEVLIEN 242

Query: 246 LMDPSHVPYAHYGLMRTQQPKGRHIR 271
           LMDPSHVPYAHYGLM+T QPK +  R
Sbjct: 243 LMDPSHVPYAHYGLMKTPQPKVKADR 268


>Medtr8g085790.2 | chlorophyllide A oxygenase | HC |
           chr8:35568496-35565845 | 20130731
          Length = 396

 Score =  455 bits (1170), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 215/265 (81%), Positives = 234/265 (88%), Gaps = 2/265 (0%)

Query: 5   VAFSVRSLHIPTPLESSTPLRKSMFLSTQLNPPLSLVHGITSKSKLFTALSPTQLTEESS 64
           +AFS+ SLHIP   ++ TPL+KSMFL +Q++  L L+ G TSK KLFTALSP+ LTE SS
Sbjct: 2   LAFSLCSLHIPIAHKTQTPLKKSMFLKSQIHSTLPLIRGNTSKFKLFTALSPSPLTESSS 61

Query: 65  SNNLPEDEPEVEANSEKFDWYSQWYPLMPICDLDKRAPHAKKVLGIDVVVWWDRNEGAWQ 124
           SN   +DEPEVE  SEKFDWYSQWYPLMPICDLDKRAPHAKKV+GIDVV+WWDRNE AWQ
Sbjct: 62  SNLEVDDEPEVETGSEKFDWYSQWYPLMPICDLDKRAPHAKKVMGIDVVIWWDRNESAWQ 121

Query: 125 VFDDACPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPVHTFKKACV 184
           VFDDACPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPP+HT KKACV
Sbjct: 122 VFDDACPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPIHTSKKACV 181

Query: 185 AAYPSTVQNDILWFWPNTDPQYKDIIERKRPPYIPELDDPSYTRLMGNRDITYGYEVLIE 244
           AAYPSTVQNDILWFWPNTDPQYKDII RK PP+IPE+DDPS+T  MGNRDI YGYEVL+E
Sbjct: 182 AAYPSTVQNDILWFWPNTDPQYKDIITRKTPPFIPEIDDPSFTSFMGNRDIPYGYEVLVE 241

Query: 245 NLMDPSHVPYAHYGLMRTQQPKGRH 269
           NLMDPSHVPYAHYGL  T  PKG +
Sbjct: 242 NLMDPSHVPYAHYGL--TPDPKGNN 264


>Medtr8g085820.1 | chlorophyllide A oxygenase | HC |
           chr8:35583064-35577716 | 20130731
          Length = 527

 Score =  440 bits (1131), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 204/244 (83%), Positives = 219/244 (89%)

Query: 28  MFLSTQLNPPLSLVHGITSKSKLFTALSPTQLTEESSSNNLPEDEPEVEANSEKFDWYSQ 87
           MFL +Q++  L L+ G TSK KLFTALSP+ LTE SSSN   +DEPEVE  SEKFDWYSQ
Sbjct: 1   MFLKSQIHSTLPLIRGNTSKFKLFTALSPSPLTESSSSNLEVDDEPEVETGSEKFDWYSQ 60

Query: 88  WYPLMPICDLDKRAPHAKKVLGIDVVVWWDRNEGAWQVFDDACPHRLAPLSEGRIDQWGR 147
           WYPLMPICDLDKRAPHAKKV+GIDVV+WWDRNE AWQVFDDACPHRLAPLSEGRIDQWGR
Sbjct: 61  WYPLMPICDLDKRAPHAKKVMGIDVVIWWDRNESAWQVFDDACPHRLAPLSEGRIDQWGR 120

Query: 148 LQCVYHGWCFNGSGDCKFIPQAPPEGPPVHTFKKACVAAYPSTVQNDILWFWPNTDPQYK 207
           LQCVYHGWCFNGSGDCKFIPQAPPEGPP+HT KKACVAAYPSTVQNDILWFWPNTDPQYK
Sbjct: 121 LQCVYHGWCFNGSGDCKFIPQAPPEGPPIHTSKKACVAAYPSTVQNDILWFWPNTDPQYK 180

Query: 208 DIIERKRPPYIPELDDPSYTRLMGNRDITYGYEVLIENLMDPSHVPYAHYGLMRTQQPKG 267
           DII RK PP+IPE+DDPS+T  MGNRDI YGYEVL+ENLMDPSHVPYAHYGLM+T QPK 
Sbjct: 181 DIITRKTPPFIPEIDDPSFTSFMGNRDIPYGYEVLVENLMDPSHVPYAHYGLMKTPQPKV 240

Query: 268 RHIR 271
           +  R
Sbjct: 241 KADR 244


>Medtr8g085790.1 | chlorophyllide A oxygenase | HC |
           chr8:35568333-35564786 | 20130731
          Length = 532

 Score =  433 bits (1113), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 202/242 (83%), Positives = 216/242 (89%), Gaps = 2/242 (0%)

Query: 28  MFLSTQLNPPLSLVHGITSKSKLFTALSPTQLTEESSSNNLPEDEPEVEANSEKFDWYSQ 87
           MFL +Q++  L L+ G TSK KLFTALSP+ LTE SSSN   +DEPEVE  SEKFDWYSQ
Sbjct: 1   MFLKSQIHSTLPLIRGNTSKFKLFTALSPSPLTESSSSNLEVDDEPEVETGSEKFDWYSQ 60

Query: 88  WYPLMPICDLDKRAPHAKKVLGIDVVVWWDRNEGAWQVFDDACPHRLAPLSEGRIDQWGR 147
           WYPLMPICDLDKRAPHAKKV+GIDVV+WWDRNE AWQVFDDACPHRLAPLSEGRIDQWGR
Sbjct: 61  WYPLMPICDLDKRAPHAKKVMGIDVVIWWDRNESAWQVFDDACPHRLAPLSEGRIDQWGR 120

Query: 148 LQCVYHGWCFNGSGDCKFIPQAPPEGPPVHTFKKACVAAYPSTVQNDILWFWPNTDPQYK 207
           LQCVYHGWCFNGSGDCKFIPQAPPEGPP+HT KKACVAAYPSTVQNDILWFWPNTDPQYK
Sbjct: 121 LQCVYHGWCFNGSGDCKFIPQAPPEGPPIHTSKKACVAAYPSTVQNDILWFWPNTDPQYK 180

Query: 208 DIIERKRPPYIPELDDPSYTRLMGNRDITYGYEVLIENLMDPSHVPYAHYGLMRTQQPKG 267
           DII RK PP+IPE+DDPS+T  MGNRDI YGYEVL+ENLMDPSHVPYAHYGL  T  PKG
Sbjct: 181 DIITRKTPPFIPEIDDPSFTSFMGNRDIPYGYEVLVENLMDPSHVPYAHYGL--TPDPKG 238

Query: 268 RH 269
            +
Sbjct: 239 NN 240


>Medtr4g057200.1 | lethal leaf-spot protein, putative | HC |
           chr4:20906265-20911203 | 20130731
          Length = 542

 Score =  172 bits (437), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 85/204 (41%), Positives = 115/204 (56%), Gaps = 16/204 (7%)

Query: 70  EDEPEVEANS-----------EKFDWYSQWYPLMPICDLDKRAPHAKKVLGIDVVVWWDR 118
           E  PE E N             KF W   WYP+  I DLD   P   ++LG ++V+W+D+
Sbjct: 67  ESYPEAEKNEIDEEFEDESSSSKFSWRDHWYPVSLIEDLDSSLPTPFQLLGREIVIWFDK 126

Query: 119 NEGAWQVFDDACPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPVHT 178
               W  FDD CPHRLAPLSEGRID+ G LQC YHGW F+G G C  IPQA PEGP    
Sbjct: 127 ANSQWVAFDDKCPHRLAPLSEGRIDESGNLQCSYHGWSFDGRGGCTVIPQASPEGPEARA 186

Query: 179 FK--KACVAAYPSTVQNDILWFWPNTDPQYKDIIERKRPPYIP-ELDDPSYTRLMGNRDI 235
               +AC   +P+ V   +L+ WP+ +   K      +PP +P +   P +  +   RD+
Sbjct: 187 VGSPRACATRFPTLVSQGLLFVWPDENGWEK--ANASKPPMLPDDFVKPEFATVNIQRDL 244

Query: 236 TYGYEVLIENLMDPSHVPYAHYGL 259
            YGY+ L+EN+ DPSH+ +AH+ +
Sbjct: 245 FYGYDTLMENVSDPSHIDFAHHKV 268


>Medtr3g105820.1 | translocon at the inner envelope membrane ofs
           protein 55-II | HC | chr3:48812416-48815358 | 20130731
          Length = 552

 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 96/189 (50%), Gaps = 13/189 (6%)

Query: 70  EDEPEVEANSEKFDWYSQWYPLMPICDLDKRAPHAKKVLGIDVVVWWDRNEGAWQVFDDA 129
           E E   E     +DW  +WYPL    ++   AP    V   ++V++ D N+  +Q ++D 
Sbjct: 84  EQERRGERELAAYDWKEEWYPLYLTKNVPDDAPLGLTVFDKNLVLFKDGND-QFQCYEDR 142

Query: 130 CPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPVHTFKKACVAAYPS 189
           CPHRLA LSEG++   GRL+C+YHGW F G G C  IPQ P +       + ACV  Y  
Sbjct: 143 CPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVKTYEV 198

Query: 190 TVQNDILWFW--PNTDPQYKDIIERKRPPYIPELDDPSYTRLMGNRDITYGYEVLIENLM 247
                ++W W  P   P    I      P+      P +  +    ++ Y + +L+ENLM
Sbjct: 199 RDSQGVIWVWMSPKVPPNVSKI------PWFENFARPGFQDVSTTHELPYDHSILLENLM 252

Query: 248 DPSHVPYAH 256
           DP+H+P +H
Sbjct: 253 DPAHIPISH 261


>Medtr1g030480.1 | chlorophyllide A oxygenase | HC |
           chr1:10441327-10436366 | 20130731
          Length = 531

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 10/117 (8%)

Query: 88  WYPLMPICDLDKRAPHAKKVLGIDVVVWWDRNEGAWQVFDDACPHRLAPLSEGRIDQWGR 147
           WYP+    DL   +    +      V++  ++ G      + C HR  PL  G +++ GR
Sbjct: 213 WYPVAFSADLKDDSMVPMECFEEPWVIFRGKD-GKPGCVQNTCAHRACPLHLGSVNE-GR 270

Query: 148 LQCVYHGWCFNGSGDCKFIPQAPPEGPPVHTFKKACVAAYPSTVQNDILWFWPNTDP 204
           + C YHGW +   G C+ +P                + + P   +  ++W WP +DP
Sbjct: 271 IACPYHGWEYTTDGKCEKMPST--------RMLNVKIKSIPCFEKEGMIWIWPGSDP 319