Miyakogusa Predicted Gene

Lj6g3v2274510.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2274510.1 CUFF.60981.1
         (155 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g088750.1 | DUF793 family protein | HC | chr8:36867521-368...   185   2e-47
Medtr2g006850.1 | hypothetical protein | HC | chr2:642835-641301...   169   1e-42
Medtr3g073480.1 | hypothetical protein | HC | chr3:33138549-3313...   139   9e-34
Medtr5g460870.1 | hypothetical protein | HC | chr5:25259118-2525...   132   1e-31
Medtr5g060880.1 | hypothetical protein | HC | chr5:25323771-2532...   130   6e-31

>Medtr8g088750.1 | DUF793 family protein | HC |
           chr8:36867521-36865470 | 20130731
          Length = 320

 Score =  185 bits (469), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 96/159 (60%), Positives = 115/159 (72%), Gaps = 5/159 (3%)

Query: 1   MESKLNGFSGFRGVLHAMRSVGSXXXXXXXXXXAYCWSSSCF----HQGDMVFGSGFMVS 56
           +ES LN ++ FRGVL+AMR V S          AYCWSSSCF    ++G++VFGS FMVS
Sbjct: 163 LESNLNEYNSFRGVLYAMRRVSSLLLMILLSGVAYCWSSSCFDHQGYEGNLVFGSSFMVS 222

Query: 57  MAMLQQKVTXXXXXXXXXXXXLLFEFQQAKIAMEELKVELERMAGYEAHGDDIQEKVENV 116
           MA LQ KV             LLFEFQQAK+AMEELKVELER+  Y+A  + IQ KV+ +
Sbjct: 223 MARLQHKVGKEIDRINVQPGVLLFEFQQAKVAMEELKVELERIVVYDAEFE-IQAKVDKL 281

Query: 117 KSCFGLLRCGVETITGQLDDFFDEIVEGRKKLLDMCSHR 155
           KSCFGLL+CGVE + G++DDFFDEIVEGRKKLLDMCSH+
Sbjct: 282 KSCFGLLKCGVENLIGKVDDFFDEIVEGRKKLLDMCSHK 320


>Medtr2g006850.1 | hypothetical protein | HC | chr2:642835-641301 |
           20130731
          Length = 304

 Score =  169 bits (428), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/148 (66%), Positives = 104/148 (70%), Gaps = 10/148 (6%)

Query: 2   ESKLNGFSGFRGVLHAMRSVGSXXXXXXXXXXAYCWSSSCFHQGDMVFGSGFMVSMAMLQ 61
            SKLNGFSGFRGVL AMRSV S          AYCWSSSCFH        G MVSM MLQ
Sbjct: 164 NSKLNGFSGFRGVLFAMRSVSSLLLMILLSGLAYCWSSSCFHH------EGQMVSMEMLQ 217

Query: 62  QKVTXXXXXXXXXXXXLLFEFQQAKIAMEELKVELERMAGYEAHGDDIQEKVENVKSCFG 121
           QKV             LLFEFQ+AKIAMEELKVELE +      G++IQEKVENVK+CFG
Sbjct: 218 QKVAEEIDNNDGQGI-LLFEFQKAKIAMEELKVELENIT---YGGNEIQEKVENVKNCFG 273

Query: 122 LLRCGVETITGQLDDFFDEIVEGRKKLL 149
           LLRCGV+TITGQLDDFFDEIVEGRKKL 
Sbjct: 274 LLRCGVDTITGQLDDFFDEIVEGRKKLF 301


>Medtr3g073480.1 | hypothetical protein | HC |
           chr3:33138549-33136466 | 20130731
          Length = 325

 Score =  139 bits (351), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 75/167 (44%), Positives = 102/167 (61%), Gaps = 12/167 (7%)

Query: 1   MESKLNGFSGFRGVLHAMRSVGSXXXXXXXXXXAYCWSSSCF----------HQGDMVFG 50
           +ESKLNGF+GFRGVL+AMR+V S           YC+  S            ++G +  G
Sbjct: 159 IESKLNGFNGFRGVLYAMRNVSSLLLMILLYGLVYCYPESSDLIFGGYEDYEYEGCLFLG 218

Query: 51  SGFMVSMAMLQQKVTXXXXXXXXXXXXLLFEFQQAKIAMEELKVELERMAGYEAHGDD-- 108
           S FM+S A LQQ+V             LL EF+++K+ +E+L+ E+ER        ++  
Sbjct: 219 SSFMISTARLQQRVAAEMAGINGGPGMLLHEFRRSKVVIEDLRGEMERKGSMMEWENEVA 278

Query: 109 IQEKVENVKSCFGLLRCGVETITGQLDDFFDEIVEGRKKLLDMCSHR 155
           I+E+V+N++S FG+LR G + I  QLDDFFDEIVEGRKKLLD CSHR
Sbjct: 279 IRERVDNLRSSFGVLRSGADNIIAQLDDFFDEIVEGRKKLLDFCSHR 325


>Medtr5g460870.1 | hypothetical protein | HC |
           chr5:25259118-25258175 | 20130731
          Length = 259

 Score =  132 bits (332), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/163 (47%), Positives = 101/163 (61%), Gaps = 10/163 (6%)

Query: 1   MESKLNGFSGFRGVLHAMRSVGSXXXXXXXXXXAY-CWSSS---CFHQGDMVFGSGFMVS 56
           +ESKLNGF+GFRGVL+AMR++ S           Y C  +S     ++G M  GSG M+S
Sbjct: 28  VESKLNGFNGFRGVLYAMRNISSMLLTILLHGLVYRCPVTSDTVARYEGWMFHGSGLMMS 87

Query: 57  MAMLQQKVTXXXXXXXXXXXXLLFEFQQAKIAMEELKVELERMAGYEA----HGDDIQEK 112
            A LQQ+V             LL+EF+ A+ ++EEL+ ELER    +       D ++E+
Sbjct: 88  AARLQQRVAAEMSEAEPGM--LLYEFRHARASVEELRGELERNVSSQVVQWEMEDGLRER 145

Query: 113 VENVKSCFGLLRCGVETITGQLDDFFDEIVEGRKKLLDMCSHR 155
           VE V+ CFG+L+ G + I  QLDDFFDEIVEGRKKLLD CSHR
Sbjct: 146 VECVRMCFGVLKSGADNIVSQLDDFFDEIVEGRKKLLDFCSHR 188


>Medtr5g060880.1 | hypothetical protein | HC |
           chr5:25323771-25321968 | 20130731
          Length = 403

 Score =  130 bits (326), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 76/162 (46%), Positives = 100/162 (61%), Gaps = 10/162 (6%)

Query: 1   MESKLNGFSGFRGVLHAMRSVGSXXXXXXXXXXAY-CWSSS---CFHQGDMVFGSGFMVS 56
           +ESKLNGF+GFRGVL+AMR++ S           Y C  +S     ++G M  GSG M+S
Sbjct: 167 VESKLNGFNGFRGVLYAMRNISSMLLTILLHGLVYRCPVTSDTVARYEGWMFHGSGLMMS 226

Query: 57  MAMLQQKVTXXXXXXXXXXXXLLFEFQQAKIAMEELKVELERMAGYEA----HGDDIQEK 112
            A LQQ+V             LL+EF+ A+ ++EEL+ ELER    +       D ++E+
Sbjct: 227 AARLQQRVAAEMSEAEPGM--LLYEFRHARASVEELRGELERNVSSQVVQWEMEDGLRER 284

Query: 113 VENVKSCFGLLRCGVETITGQLDDFFDEIVEGRKKLLDMCSH 154
           VE V+ CFG+L+ G + I  QLDDFFDEIVEGRKKLLD CSH
Sbjct: 285 VECVRMCFGVLKSGADNIVSQLDDFFDEIVEGRKKLLDFCSH 326