Miyakogusa Predicted Gene
- Lj6g3v2274500.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2274500.1 Non Characterized Hit- tr|C5XRC0|C5XRC0_SORBI
Putative uncharacterized protein Sb03g041420
OS=Sorghu,37.1,0.000000002,seg,NULL; coiled-coil,NULL,CUFF.60982.1
(304 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g006850.1 | hypothetical protein | HC | chr2:642835-641301... 396 e-110
Medtr8g088750.1 | DUF793 family protein | HC | chr8:36867521-368... 373 e-103
Medtr3g073480.1 | hypothetical protein | HC | chr3:33138549-3313... 308 3e-84
Medtr5g060880.1 | hypothetical protein | HC | chr5:25323771-2532... 281 8e-76
Medtr5g460870.1 | hypothetical protein | HC | chr5:25259118-2525... 137 1e-32
>Medtr2g006850.1 | hypothetical protein | HC | chr2:642835-641301 |
20130731
Length = 304
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/302 (70%), Positives = 230/302 (76%), Gaps = 14/302 (4%)
Query: 7 TNSSINGFYNFLTQGLNDLHQSFLSHNFMSIQFLSQVISSLQSFHSQLTILVCKLRLPVG 66
+NSSINGFYN L QGL DLHQ+F+SHNFMS QFLSQVISSLQSFHSQLT+LV KLRLPVG
Sbjct: 4 SNSSINGFYNMLNQGLIDLHQTFISHNFMSFQFLSQVISSLQSFHSQLTLLVRKLRLPVG 63
Query: 67 GKWLDEYMDESSRLWDACHVLKSAISGIEXXXXXXXXXXXXLDG-YHHFTPELSRQVIRA 125
GKWLDEYMDESSRLWD+CHVLKSAISGI+ L G YHH TPE SRQVIRA
Sbjct: 64 GKWLDEYMDESSRLWDSCHVLKSAISGIDNYYSSATNIVSSLHGYYHHVTPEFSRQVIRA 123
Query: 126 INVCQREILGLEEENKSLVETRIQPLSQCLYQNISV---MESKLNGFSGFRGVLHAMRSV 182
INVCQREILG+EEENK+L ETRIQ LSQCL QN ++ SKLNGFSGFRGVL AMRSV
Sbjct: 124 INVCQREILGMEEENKNLTETRIQQLSQCLNQNTNICSNSNSKLNGFSGFRGVLFAMRSV 183
Query: 183 GSXXXXXXXXXXAYCWSSSCFHQGDMVFGSGFMVSMAMLQQKVTXXXXXXXXXXXXLLFE 242
S AYCWSSSCFH G MVSM MLQQKV LLFE
Sbjct: 184 SSLLLMILLSGLAYCWSSSCFHH------EGQMVSMEMLQQKVA-EEIDNNDGQGILLFE 236
Query: 243 FQQAKIAMEELKVELERMAGYEAHGDDIQEKVENVKSCFGLLRCGVETITGQLDDFFDEI 302
FQ+AKIAMEELKVELE + G++IQEKVENVK+CFGLLRCGV+TITGQLDDFFDEI
Sbjct: 237 FQKAKIAMEELKVELENIT---YGGNEIQEKVENVKNCFGLLRCGVDTITGQLDDFFDEI 293
Query: 303 VE 304
VE
Sbjct: 294 VE 295
>Medtr8g088750.1 | DUF793 family protein | HC |
chr8:36867521-36865470 | 20130731
Length = 320
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/297 (64%), Positives = 226/297 (76%), Gaps = 7/297 (2%)
Query: 13 GFYNFLTQGLNDLHQSF-LSHNFMSIQFLSQVISSLQSFHSQLTILVCKLRLPVGGKWLD 71
GFY FLTQGLN LHQS LSHNFMSIQF+S+V+SSLQSFHSQLT+LV L LP+GGKWLD
Sbjct: 14 GFYTFLTQGLNVLHQSLILSHNFMSIQFISEVLSSLQSFHSQLTLLVQNLCLPIGGKWLD 73
Query: 72 EYMDESSRLWDACHVLKSAISGIEXXXXXXXXXXXXLDGYHHFTPELSRQVIRAINVCQR 131
EYMDESSRLWD CHVLKS+ISGIE LD +HH TPE+S QVIRA+N+CQR
Sbjct: 74 EYMDESSRLWDICHVLKSSISGIENYSSAGSNIATSLDVFHHLTPEVSHQVIRAMNICQR 133
Query: 132 EILGLEEENKSLVETRIQPLSQCLYQNISVMESKLNGFSGFRGVLHAMRSVGSXXXXXXX 191
EI+G+EEENKS++ETRIQ LSQ L QN+S +ES LN ++ FRGVL+AMR V S
Sbjct: 134 EIIGMEEENKSMMETRIQALSQSLNQNMS-LESNLNEYNSFRGVLYAMRRVSSLLLMILL 192
Query: 192 XXXAYCWSSSCF----HQGDMVFGSGFMVSMAMLQQKVTXXXXXXXXXXXXLLFEFQQAK 247
AYCWSSSCF ++G++VFGS FMVSMA LQ KV LLFEFQQAK
Sbjct: 193 SGVAYCWSSSCFDHQGYEGNLVFGSSFMVSMARLQHKVGKEIDRINVQPGVLLFEFQQAK 252
Query: 248 IAMEELKVELERMAGYEAHGDDIQEKVENVKSCFGLLRCGVETITGQLDDFFDEIVE 304
+AMEELKVELER+ Y+A +IQ KV+ +KSCFGLL+CGVE + G++DDFFDEIVE
Sbjct: 253 VAMEELKVELERIVVYDAEF-EIQAKVDKLKSCFGLLKCGVENLIGKVDDFFDEIVE 308
>Medtr3g073480.1 | hypothetical protein | HC |
chr3:33138549-33136466 | 20130731
Length = 325
Score = 308 bits (790), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 160/315 (50%), Positives = 214/315 (67%), Gaps = 14/315 (4%)
Query: 2 MGSSCTNSSINGFYNFLTQGLNDLHQSFLSHNFMSIQFLSQVISSLQSFHSQLTILVCKL 61
M S TNS +NGFY+FLT+G++DL + FL++NFMSIQFL + +S L+S H+QLT+LV KL
Sbjct: 1 MDPSSTNS-VNGFYSFLTRGIDDLERVFLTNNFMSIQFLQRTLSLLRSLHTQLTLLVQKL 59
Query: 62 RLPVGGKWLDEYMDESSRLWDACHVLKSAISGIEXXXXXXXXXXXXLDGYHHFTPELSRQ 121
LPVG KWLDEYMDESS+LW+ACHVLKS ISGIE LD + H TP++SRQ
Sbjct: 60 HLPVGDKWLDEYMDESSKLWEACHVLKSGISGIENYYSAASNITSTLDSHIHITPQISRQ 119
Query: 122 VIRAINVCQREILGLEEENKSLVETRIQPLSQCLYQNISVMESKLNGFSGFRGVLHAMRS 181
+IRAI+ C+RE +GLEEEN++L+ETRIQPLS + +S+ ESKLNGF+GFRGVL+AMR+
Sbjct: 120 IIRAISGCRREAVGLEEENRALMETRIQPLSLRFDERVSI-ESKLNGFNGFRGVLYAMRN 178
Query: 182 VGSXXXXXXXXXXAYCWSSSCF----------HQGDMVFGSGFMVSMAMLQQKVTXXXXX 231
V S YC+ S ++G + GS FM+S A LQQ+V
Sbjct: 179 VSSLLLMILLYGLVYCYPESSDLIFGGYEDYEYEGCLFLGSSFMISTARLQQRVAAEMAG 238
Query: 232 XXXXXXXLLFEFQQAKIAMEELKVELERMAGYEAHGDD--IQEKVENVKSCFGLLRCGVE 289
LL EF+++K+ +E+L+ E+ER ++ I+E+V+N++S FG+LR G +
Sbjct: 239 INGGPGMLLHEFRRSKVVIEDLRGEMERKGSMMEWENEVAIRERVDNLRSSFGVLRSGAD 298
Query: 290 TITGQLDDFFDEIVE 304
I QLDDFFDEIVE
Sbjct: 299 NIIAQLDDFFDEIVE 313
>Medtr5g060880.1 | hypothetical protein | HC |
chr5:25323771-25321968 | 20130731
Length = 403
Score = 281 bits (718), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 150/300 (50%), Positives = 200/300 (66%), Gaps = 11/300 (3%)
Query: 13 GFYNFLTQGLNDLHQSFLSHNFMSIQFLSQVISSLQSFHSQLTILVCKLRLPVGGKWLDE 72
GFY FL +G++DL ++FLS+N MSIQFL +V+S L+SFH+QL +LV KL LPVG KWLDE
Sbjct: 19 GFYTFLNRGIDDLERAFLSNNLMSIQFLQRVLSILRSFHTQLVLLVQKLHLPVGDKWLDE 78
Query: 73 YMDESSRLWDACHVLKSAISGIEXXXXXXXXXXXXLDGYHHFTPELSRQVIRAINVCQRE 132
YMDESS+LW+ CH+LKS ISG + D + FTP+L RQV+R I+ C+RE
Sbjct: 79 YMDESSKLWETCHLLKSGISGFDGYYSAGINVTNFFDSHARFTPQLWRQVLRGISRCRRE 138
Query: 133 ILGLEEENKSLVETRIQPLSQCLYQNISVMESKLNGFSGFRGVLHAMRSVGSXXXXXXXX 192
+GLEEEN++L+ETR+Q LS C + +SV ESKLNGF+GFRGVL+AMR++ S
Sbjct: 139 AMGLEEENRALMETRVQLLSLCFDERVSV-ESKLNGFNGFRGVLYAMRNISSMLLTILLH 197
Query: 193 XXAY-CWSSS---CFHQGDMVFGSGFMVSMAMLQQKVTXXXXXXXXXXXXLLFEFQQAKI 248
Y C +S ++G M GSG M+S A LQQ+V LL+EF+ A+
Sbjct: 198 GLVYRCPVTSDTVARYEGWMFHGSGLMMSAARLQQRVA--AEMSEAEPGMLLYEFRHARA 255
Query: 249 AMEELKVELERMAGYEA----HGDDIQEKVENVKSCFGLLRCGVETITGQLDDFFDEIVE 304
++EEL+ ELER + D ++E+VE V+ CFG+L+ G + I QLDDFFDEIVE
Sbjct: 256 SVEELRGELERNVSSQVVQWEMEDGLRERVECVRMCFGVLKSGADNIVSQLDDFFDEIVE 315
>Medtr5g460870.1 | hypothetical protein | HC |
chr5:25259118-25258175 | 20130731
Length = 259
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 112/179 (62%), Gaps = 11/179 (6%)
Query: 134 LGLEEENKSLVETRIQPLSQCLYQNISVMESKLNGFSGFRGVLHAMRSVGSXXXXXXXXX 193
+GLEEEN++L+ETR+Q LS C + +SV ESKLNGF+GFRGVL+AMR++ S
Sbjct: 1 MGLEEENRALMETRVQLLSLCFDERVSV-ESKLNGFNGFRGVLYAMRNISSMLLTILLHG 59
Query: 194 XAY-CWSSS---CFHQGDMVFGSGFMVSMAMLQQKVTXXXXXXXXXXXXLLFEFQQAKIA 249
Y C +S ++G M GSG M+S A LQQ+V LL+EF+ A+ +
Sbjct: 60 LVYRCPVTSDTVARYEGWMFHGSGLMMSAARLQQRVAAEMSEAEPGM--LLYEFRHARAS 117
Query: 250 MEELKVELERMAGYEA----HGDDIQEKVENVKSCFGLLRCGVETITGQLDDFFDEIVE 304
+EEL+ ELER + D ++E+VE V+ CFG+L+ G + I QLDDFFDEIVE
Sbjct: 118 VEELRGELERNVSSQVVQWEMEDGLRERVECVRMCFGVLKSGADNIVSQLDDFFDEIVE 176