Miyakogusa Predicted Gene

Lj6g3v2274500.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2274500.1 Non Characterized Hit- tr|C5XRC0|C5XRC0_SORBI
Putative uncharacterized protein Sb03g041420
OS=Sorghu,37.1,0.000000002,seg,NULL; coiled-coil,NULL,CUFF.60982.1
         (304 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g006850.1 | hypothetical protein | HC | chr2:642835-641301...   396   e-110
Medtr8g088750.1 | DUF793 family protein | HC | chr8:36867521-368...   373   e-103
Medtr3g073480.1 | hypothetical protein | HC | chr3:33138549-3313...   308   3e-84
Medtr5g060880.1 | hypothetical protein | HC | chr5:25323771-2532...   281   8e-76
Medtr5g460870.1 | hypothetical protein | HC | chr5:25259118-2525...   137   1e-32

>Medtr2g006850.1 | hypothetical protein | HC | chr2:642835-641301 |
           20130731
          Length = 304

 Score =  396 bits (1018), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/302 (70%), Positives = 230/302 (76%), Gaps = 14/302 (4%)

Query: 7   TNSSINGFYNFLTQGLNDLHQSFLSHNFMSIQFLSQVISSLQSFHSQLTILVCKLRLPVG 66
           +NSSINGFYN L QGL DLHQ+F+SHNFMS QFLSQVISSLQSFHSQLT+LV KLRLPVG
Sbjct: 4   SNSSINGFYNMLNQGLIDLHQTFISHNFMSFQFLSQVISSLQSFHSQLTLLVRKLRLPVG 63

Query: 67  GKWLDEYMDESSRLWDACHVLKSAISGIEXXXXXXXXXXXXLDG-YHHFTPELSRQVIRA 125
           GKWLDEYMDESSRLWD+CHVLKSAISGI+            L G YHH TPE SRQVIRA
Sbjct: 64  GKWLDEYMDESSRLWDSCHVLKSAISGIDNYYSSATNIVSSLHGYYHHVTPEFSRQVIRA 123

Query: 126 INVCQREILGLEEENKSLVETRIQPLSQCLYQNISV---MESKLNGFSGFRGVLHAMRSV 182
           INVCQREILG+EEENK+L ETRIQ LSQCL QN ++     SKLNGFSGFRGVL AMRSV
Sbjct: 124 INVCQREILGMEEENKNLTETRIQQLSQCLNQNTNICSNSNSKLNGFSGFRGVLFAMRSV 183

Query: 183 GSXXXXXXXXXXAYCWSSSCFHQGDMVFGSGFMVSMAMLQQKVTXXXXXXXXXXXXLLFE 242
            S          AYCWSSSCFH        G MVSM MLQQKV             LLFE
Sbjct: 184 SSLLLMILLSGLAYCWSSSCFHH------EGQMVSMEMLQQKVA-EEIDNNDGQGILLFE 236

Query: 243 FQQAKIAMEELKVELERMAGYEAHGDDIQEKVENVKSCFGLLRCGVETITGQLDDFFDEI 302
           FQ+AKIAMEELKVELE +      G++IQEKVENVK+CFGLLRCGV+TITGQLDDFFDEI
Sbjct: 237 FQKAKIAMEELKVELENIT---YGGNEIQEKVENVKNCFGLLRCGVDTITGQLDDFFDEI 293

Query: 303 VE 304
           VE
Sbjct: 294 VE 295


>Medtr8g088750.1 | DUF793 family protein | HC |
           chr8:36867521-36865470 | 20130731
          Length = 320

 Score =  373 bits (957), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 193/297 (64%), Positives = 226/297 (76%), Gaps = 7/297 (2%)

Query: 13  GFYNFLTQGLNDLHQSF-LSHNFMSIQFLSQVISSLQSFHSQLTILVCKLRLPVGGKWLD 71
           GFY FLTQGLN LHQS  LSHNFMSIQF+S+V+SSLQSFHSQLT+LV  L LP+GGKWLD
Sbjct: 14  GFYTFLTQGLNVLHQSLILSHNFMSIQFISEVLSSLQSFHSQLTLLVQNLCLPIGGKWLD 73

Query: 72  EYMDESSRLWDACHVLKSAISGIEXXXXXXXXXXXXLDGYHHFTPELSRQVIRAINVCQR 131
           EYMDESSRLWD CHVLKS+ISGIE            LD +HH TPE+S QVIRA+N+CQR
Sbjct: 74  EYMDESSRLWDICHVLKSSISGIENYSSAGSNIATSLDVFHHLTPEVSHQVIRAMNICQR 133

Query: 132 EILGLEEENKSLVETRIQPLSQCLYQNISVMESKLNGFSGFRGVLHAMRSVGSXXXXXXX 191
           EI+G+EEENKS++ETRIQ LSQ L QN+S +ES LN ++ FRGVL+AMR V S       
Sbjct: 134 EIIGMEEENKSMMETRIQALSQSLNQNMS-LESNLNEYNSFRGVLYAMRRVSSLLLMILL 192

Query: 192 XXXAYCWSSSCF----HQGDMVFGSGFMVSMAMLQQKVTXXXXXXXXXXXXLLFEFQQAK 247
              AYCWSSSCF    ++G++VFGS FMVSMA LQ KV             LLFEFQQAK
Sbjct: 193 SGVAYCWSSSCFDHQGYEGNLVFGSSFMVSMARLQHKVGKEIDRINVQPGVLLFEFQQAK 252

Query: 248 IAMEELKVELERMAGYEAHGDDIQEKVENVKSCFGLLRCGVETITGQLDDFFDEIVE 304
           +AMEELKVELER+  Y+A   +IQ KV+ +KSCFGLL+CGVE + G++DDFFDEIVE
Sbjct: 253 VAMEELKVELERIVVYDAEF-EIQAKVDKLKSCFGLLKCGVENLIGKVDDFFDEIVE 308


>Medtr3g073480.1 | hypothetical protein | HC |
           chr3:33138549-33136466 | 20130731
          Length = 325

 Score =  308 bits (790), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 160/315 (50%), Positives = 214/315 (67%), Gaps = 14/315 (4%)

Query: 2   MGSSCTNSSINGFYNFLTQGLNDLHQSFLSHNFMSIQFLSQVISSLQSFHSQLTILVCKL 61
           M  S TNS +NGFY+FLT+G++DL + FL++NFMSIQFL + +S L+S H+QLT+LV KL
Sbjct: 1   MDPSSTNS-VNGFYSFLTRGIDDLERVFLTNNFMSIQFLQRTLSLLRSLHTQLTLLVQKL 59

Query: 62  RLPVGGKWLDEYMDESSRLWDACHVLKSAISGIEXXXXXXXXXXXXLDGYHHFTPELSRQ 121
            LPVG KWLDEYMDESS+LW+ACHVLKS ISGIE            LD + H TP++SRQ
Sbjct: 60  HLPVGDKWLDEYMDESSKLWEACHVLKSGISGIENYYSAASNITSTLDSHIHITPQISRQ 119

Query: 122 VIRAINVCQREILGLEEENKSLVETRIQPLSQCLYQNISVMESKLNGFSGFRGVLHAMRS 181
           +IRAI+ C+RE +GLEEEN++L+ETRIQPLS    + +S+ ESKLNGF+GFRGVL+AMR+
Sbjct: 120 IIRAISGCRREAVGLEEENRALMETRIQPLSLRFDERVSI-ESKLNGFNGFRGVLYAMRN 178

Query: 182 VGSXXXXXXXXXXAYCWSSSCF----------HQGDMVFGSGFMVSMAMLQQKVTXXXXX 231
           V S           YC+  S            ++G +  GS FM+S A LQQ+V      
Sbjct: 179 VSSLLLMILLYGLVYCYPESSDLIFGGYEDYEYEGCLFLGSSFMISTARLQQRVAAEMAG 238

Query: 232 XXXXXXXLLFEFQQAKIAMEELKVELERMAGYEAHGDD--IQEKVENVKSCFGLLRCGVE 289
                  LL EF+++K+ +E+L+ E+ER        ++  I+E+V+N++S FG+LR G +
Sbjct: 239 INGGPGMLLHEFRRSKVVIEDLRGEMERKGSMMEWENEVAIRERVDNLRSSFGVLRSGAD 298

Query: 290 TITGQLDDFFDEIVE 304
            I  QLDDFFDEIVE
Sbjct: 299 NIIAQLDDFFDEIVE 313


>Medtr5g060880.1 | hypothetical protein | HC |
           chr5:25323771-25321968 | 20130731
          Length = 403

 Score =  281 bits (718), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 150/300 (50%), Positives = 200/300 (66%), Gaps = 11/300 (3%)

Query: 13  GFYNFLTQGLNDLHQSFLSHNFMSIQFLSQVISSLQSFHSQLTILVCKLRLPVGGKWLDE 72
           GFY FL +G++DL ++FLS+N MSIQFL +V+S L+SFH+QL +LV KL LPVG KWLDE
Sbjct: 19  GFYTFLNRGIDDLERAFLSNNLMSIQFLQRVLSILRSFHTQLVLLVQKLHLPVGDKWLDE 78

Query: 73  YMDESSRLWDACHVLKSAISGIEXXXXXXXXXXXXLDGYHHFTPELSRQVIRAINVCQRE 132
           YMDESS+LW+ CH+LKS ISG +             D +  FTP+L RQV+R I+ C+RE
Sbjct: 79  YMDESSKLWETCHLLKSGISGFDGYYSAGINVTNFFDSHARFTPQLWRQVLRGISRCRRE 138

Query: 133 ILGLEEENKSLVETRIQPLSQCLYQNISVMESKLNGFSGFRGVLHAMRSVGSXXXXXXXX 192
            +GLEEEN++L+ETR+Q LS C  + +SV ESKLNGF+GFRGVL+AMR++ S        
Sbjct: 139 AMGLEEENRALMETRVQLLSLCFDERVSV-ESKLNGFNGFRGVLYAMRNISSMLLTILLH 197

Query: 193 XXAY-CWSSS---CFHQGDMVFGSGFMVSMAMLQQKVTXXXXXXXXXXXXLLFEFQQAKI 248
              Y C  +S     ++G M  GSG M+S A LQQ+V             LL+EF+ A+ 
Sbjct: 198 GLVYRCPVTSDTVARYEGWMFHGSGLMMSAARLQQRVA--AEMSEAEPGMLLYEFRHARA 255

Query: 249 AMEELKVELERMAGYEA----HGDDIQEKVENVKSCFGLLRCGVETITGQLDDFFDEIVE 304
           ++EEL+ ELER    +       D ++E+VE V+ CFG+L+ G + I  QLDDFFDEIVE
Sbjct: 256 SVEELRGELERNVSSQVVQWEMEDGLRERVECVRMCFGVLKSGADNIVSQLDDFFDEIVE 315


>Medtr5g460870.1 | hypothetical protein | HC |
           chr5:25259118-25258175 | 20130731
          Length = 259

 Score =  137 bits (345), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/179 (45%), Positives = 112/179 (62%), Gaps = 11/179 (6%)

Query: 134 LGLEEENKSLVETRIQPLSQCLYQNISVMESKLNGFSGFRGVLHAMRSVGSXXXXXXXXX 193
           +GLEEEN++L+ETR+Q LS C  + +SV ESKLNGF+GFRGVL+AMR++ S         
Sbjct: 1   MGLEEENRALMETRVQLLSLCFDERVSV-ESKLNGFNGFRGVLYAMRNISSMLLTILLHG 59

Query: 194 XAY-CWSSS---CFHQGDMVFGSGFMVSMAMLQQKVTXXXXXXXXXXXXLLFEFQQAKIA 249
             Y C  +S     ++G M  GSG M+S A LQQ+V             LL+EF+ A+ +
Sbjct: 60  LVYRCPVTSDTVARYEGWMFHGSGLMMSAARLQQRVAAEMSEAEPGM--LLYEFRHARAS 117

Query: 250 MEELKVELERMAGYEA----HGDDIQEKVENVKSCFGLLRCGVETITGQLDDFFDEIVE 304
           +EEL+ ELER    +       D ++E+VE V+ CFG+L+ G + I  QLDDFFDEIVE
Sbjct: 118 VEELRGELERNVSSQVVQWEMEDGLRERVECVRMCFGVLKSGADNIVSQLDDFFDEIVE 176