Miyakogusa Predicted Gene

Lj6g3v2272120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2272120.1 Non Characterized Hit- tr|I3SFC9|I3SFC9_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,70.67,7e-19,seg,NULL; coiled-coil,NULL,CUFF.60957.1
         (211 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g007150.1 | hypothetical protein | HC | chr2:850204-844127...    80   1e-15
Medtr2g007150.3 | hypothetical protein | HC | chr2:850204-844127...    80   1e-15
Medtr2g007150.2 | hypothetical protein | HC | chr2:850204-844142...    80   1e-15
Medtr3g097170.1 | hypothetical protein | HC | chr3:44539797-4453...    60   1e-09
Medtr3g097170.3 | hypothetical protein | HC | chr3:44539797-4453...    60   1e-09
Medtr3g097170.2 | hypothetical protein | HC | chr3:44539797-4453...    60   1e-09

>Medtr2g007150.1 | hypothetical protein | HC | chr2:850204-844127 |
           20130731
          Length = 276

 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/107 (50%), Positives = 59/107 (55%)

Query: 105 VEHKTAIXXXXXXXXXXXXXXXXXXXXIEEETAKRVEEAIRKRVEESLNSEEVQVEIQRR 164
           VE KTAI                    I EETAKRVEEAIRKRV+ESL+SEEV+VEIQRR
Sbjct: 98  VEQKTAIEKQRKEEEKKRRQQEAELKLIAEETAKRVEEAIRKRVDESLSSEEVRVEIQRR 157

Query: 165 LEEGRKRLIVEVAVQLXXXXXXXXXXXXXXXXXXXXXXXDLDRMLEE 211
           LEEGRK+L  EVA QL                       DL+RMLEE
Sbjct: 158 LEEGRKKLNDEVAAQLQKEKEAALIEAKQKEEQARKEKEDLERMLEE 204


>Medtr2g007150.3 | hypothetical protein | HC | chr2:850204-844127 |
           20130731
          Length = 276

 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/107 (50%), Positives = 59/107 (55%)

Query: 105 VEHKTAIXXXXXXXXXXXXXXXXXXXXIEEETAKRVEEAIRKRVEESLNSEEVQVEIQRR 164
           VE KTAI                    I EETAKRVEEAIRKRV+ESL+SEEV+VEIQRR
Sbjct: 98  VEQKTAIEKQRKEEEKKRRQQEAELKLIAEETAKRVEEAIRKRVDESLSSEEVRVEIQRR 157

Query: 165 LEEGRKRLIVEVAVQLXXXXXXXXXXXXXXXXXXXXXXXDLDRMLEE 211
           LEEGRK+L  EVA QL                       DL+RMLEE
Sbjct: 158 LEEGRKKLNDEVAAQLQKEKEAALIEAKQKEEQARKEKEDLERMLEE 204


>Medtr2g007150.2 | hypothetical protein | HC | chr2:850204-844142 |
           20130731
          Length = 235

 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/107 (50%), Positives = 59/107 (55%)

Query: 105 VEHKTAIXXXXXXXXXXXXXXXXXXXXIEEETAKRVEEAIRKRVEESLNSEEVQVEIQRR 164
           VE KTAI                    I EETAKRVEEAIRKRV+ESL+SEEV+VEIQRR
Sbjct: 57  VEQKTAIEKQRKEEEKKRRQQEAELKLIAEETAKRVEEAIRKRVDESLSSEEVRVEIQRR 116

Query: 165 LEEGRKRLIVEVAVQLXXXXXXXXXXXXXXXXXXXXXXXDLDRMLEE 211
           LEEGRK+L  EVA QL                       DL+RMLEE
Sbjct: 117 LEEGRKKLNDEVAAQLQKEKEAALIEAKQKEEQARKEKEDLERMLEE 163


>Medtr3g097170.1 | hypothetical protein | HC |
           chr3:44539797-44537151 | 20130731
          Length = 230

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/76 (48%), Positives = 46/76 (60%)

Query: 136 TAKRVEEAIRKRVEESLNSEEVQVEIQRRLEEGRKRLIVEVAVQLXXXXXXXXXXXXXXX 195
           TA+R+EEAIRK VEE LNSEEV+VEI+RR+ EG K+L  +V VQL               
Sbjct: 88  TARRIEEAIRKNVEEKLNSEEVKVEIERRVAEGVKKLFDDVEVQLEKEKQDALTEARRKE 147

Query: 196 XXXXXXXXDLDRMLEE 211
                   +LD+MLEE
Sbjct: 148 EQARKEREELDKMLEE 163


>Medtr3g097170.3 | hypothetical protein | HC |
           chr3:44539797-44537170 | 20130731
          Length = 230

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/76 (48%), Positives = 46/76 (60%)

Query: 136 TAKRVEEAIRKRVEESLNSEEVQVEIQRRLEEGRKRLIVEVAVQLXXXXXXXXXXXXXXX 195
           TA+R+EEAIRK VEE LNSEEV+VEI+RR+ EG K+L  +V VQL               
Sbjct: 88  TARRIEEAIRKNVEEKLNSEEVKVEIERRVAEGVKKLFDDVEVQLEKEKQDALTEARRKE 147

Query: 196 XXXXXXXXDLDRMLEE 211
                   +LD+MLEE
Sbjct: 148 EQARKEREELDKMLEE 163


>Medtr3g097170.2 | hypothetical protein | HC |
           chr3:44539797-44536388 | 20130731
          Length = 220

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/76 (48%), Positives = 46/76 (60%)

Query: 136 TAKRVEEAIRKRVEESLNSEEVQVEIQRRLEEGRKRLIVEVAVQLXXXXXXXXXXXXXXX 195
           TA+R+EEAIRK VEE LNSEEV+VEI+RR+ EG K+L  +V VQL               
Sbjct: 88  TARRIEEAIRKNVEEKLNSEEVKVEIERRVAEGVKKLFDDVEVQLEKEKQDALTEARRKE 147

Query: 196 XXXXXXXXDLDRMLEE 211
                   +LD+MLEE
Sbjct: 148 EQARKEREELDKMLEE 163