Miyakogusa Predicted Gene

Lj6g3v2272050.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2272050.1 Non Characterized Hit- tr|I1MDP3|I1MDP3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20344
PE,86.87,0,seg,NULL; no description,NULL; RNI-like,NULL; PUTATIVE
UNCHARACTERIZED PROTEIN,NULL; KELCH REPEAT DO,CUFF.60948.1
         (421 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g007220.1 | F-box plant-like protein | HC | chr2:870653-86...   676   0.0  
Medtr5g038430.1 | F-box/FBD-like domain protein | HC | chr5:1685...    52   1e-06
Medtr4g053260.1 | F-box/LRR plant protein | HC | chr4:19266078-1...    49   7e-06

>Medtr2g007220.1 | F-box plant-like protein | HC |
           chr2:870653-867454 | 20130731
          Length = 427

 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/419 (78%), Positives = 363/419 (86%)

Query: 3   MEYVPDVILQCILSHISNARDVAACNCVSKRWKDSMAYVRSLYFPRNSFDSYSADESPDD 62
           +E +PDVILQ ILSH+SN RDVA CNCVSKRWK+SMA +RSLYF RN+FD+    E+ D 
Sbjct: 9   IESLPDVILQYILSHVSNGRDVAYCNCVSKRWKNSMACIRSLYFTRNAFDNAPHRENSDI 68

Query: 63  VVKRMVSTVVQLEALVVYPPFSPRGLASWLSLVGLSLSRLELRMDNLADNQASCESPSKL 122
           +VKRMVS V +LE LVVY PFS  GLASWLSL G SLS LELRMDNL DN+   ESPSKL
Sbjct: 69  IVKRMVSAVERLEELVVYCPFSVYGLASWLSLAGPSLSHLELRMDNLGDNEIIHESPSKL 128

Query: 123 DCIGAARNLESLKLWGVLMIHSPKWDVFQNLRTLEIVGARLEDSVLNVVLQSCPYLTRLL 182
           DCIGAA N+E+LKLWGVL+   PKW+ F NLR LE+VGAR+ED+ +N ++Q+CP LTRLL
Sbjct: 129 DCIGAAVNVETLKLWGVLIKLIPKWETFHNLRILEVVGARVEDAAVNAMIQACPNLTRLL 188

Query: 183 LLGCEGIRSISIDLPYLEQCKLDFYGLGNCSLSLTSPKIESLEVQGCSWIRVPETKHLKN 242
           LLGCEG+RSISI LP+LEQCKLDFYGLGNCSLSLTSPKIESLEVQGCSWIRVPETKHLKN
Sbjct: 189 LLGCEGVRSISITLPFLEQCKLDFYGLGNCSLSLTSPKIESLEVQGCSWIRVPETKHLKN 248

Query: 243 LTISNSAGRVYNIDFGNLSALEFLSMRGIQWCWDAICKMLKLASEVKHLYMKVEFTGDYE 302
           L+ISNSAGRVY IDFGNL++LEFLSMRGIQWCWDAICKMLKLAS+VKHLYMKVEFTGDY+
Sbjct: 249 LSISNSAGRVYMIDFGNLASLEFLSMRGIQWCWDAICKMLKLASDVKHLYMKVEFTGDYD 308

Query: 303 ALQAFPEIDFVEFFNSHPKLRKFDVHGAMFAALCQRNSLKHVGPGFVIPCLEEVVITVRS 362
           ALQ FPEIDFV+FFNSHPKLRKFD+HGAMFAALCQ+NSLKHV   FVIPCLEEV ITVRS
Sbjct: 309 ALQPFPEIDFVDFFNSHPKLRKFDIHGAMFAALCQKNSLKHVDSEFVIPCLEEVFITVRS 368

Query: 363 PLKAEQKMSTLESLLKYGKNLRTMVIKILQMKXXXXXXXXXXXXICRFRYMNYGIVRIE 421
           PL AEQKMSTLESL+KYGKNLRTMVIKILQMK            ICRFRYM+ GI+RIE
Sbjct: 369 PLNAEQKMSTLESLVKYGKNLRTMVIKILQMKGSHNSADDFFDEICRFRYMHRGIIRIE 427


>Medtr5g038430.1 | F-box/FBD-like domain protein | HC |
           chr5:16855539-16866753 | 20130731
          Length = 499

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 20/207 (9%)

Query: 6   VPDVILQCILSHISNARDVAACNCVSKRWKDSMAYVRSLYFPRNSFDSYS----ADESPD 61
           +P  ++  IL H+ N RD+A  + +S++W+D       L F ++ FD Y      D SP+
Sbjct: 101 LPSNVIDGILQHL-NIRDLARTSILSRKWRDIWISFPWLEFDKDFFDLYDLKDFKDHSPE 159

Query: 62  DVVKRMVSTVVQLEALVVYPPFSPRG-------LASWLSLVGLSLSRLELRMDNLADNQA 114
             +      ++    +  +  F P G       +  W+    L LSR  ++   LA N++
Sbjct: 160 VCIIITEVLLLHNGPINKFTLFIPSGFNIPFGCIVKWI----LFLSRKGVKFIQLASNES 215

Query: 115 -SCESPSKLDCIGAARNLESLKLWGVLMIHSPKWDVFQNLRTLEIVGARLEDSVLNVVLQ 173
                PS      + + L  +++    ++  P +  F++L          E   L  ++ 
Sbjct: 216 VPYRVPSHF---FSFQKLTHVRICKFKLLVPPNFCGFKSLVHFHFERMTFEFGALESLIS 272

Query: 174 SCPYLTRLLLLGCEGIRSISIDLPYLE 200
            CP L  L ++ C GI  I +  P L+
Sbjct: 273 GCPLLEELYIVNCSGIECIDLSAPTLK 299


>Medtr4g053260.1 | F-box/LRR plant protein | HC |
           chr4:19266078-19268240 | 20130731
          Length = 420

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 139/314 (44%), Gaps = 42/314 (13%)

Query: 3   MEYVPDVILQCILSHISNARDVAACNCVSKRWKDS-MAYVRSLYFPRNSFDSYSADESPD 61
           M+ +P  ++  ILSH+ +ARDV   +   K+W+ +   ++ +L F  N +  Y  D S  
Sbjct: 2   MDQLPVEVIGNILSHLKSARDVVIASATCKKWRTACCKHLHTLSFSSNDWSVYR-DLSTT 60

Query: 62  DVVKRMVSTVVQ---LEALVV----YPPFSPRGLASWLSLVGLSLSRLELRMDNLAD-NQ 113
            +   +  T+ Q   L++L +       FS   + +WL     +L +L   +  + + N 
Sbjct: 61  RLEILITQTIFQTSGLQSLSILMEDVDEFSASAVIAWLMYTRETLRQLFYNVKTMPNVNI 120

Query: 114 ASCESPSKLDCIGAARNLESLKLWGVLMIHSPKWDVFQNLRTLEIVGARLEDSVLNVVLQ 173
                  KL+ +    +LE   + GV     P +  F  L++L +    +    LN+++ 
Sbjct: 121 LEICGRHKLEIL----DLEHNSIVGV----EPNYQRFPCLKSLSLSCVSISALDLNLLVS 172

Query: 174 SCPYLTRLLLLGCEGIRS---ISIDLP-------YLEQCKLDFYGLGNCSLSLTSPKIES 223
           +CP +  L L+  E   S   ++++L        Y+E   LD +        L +  IES
Sbjct: 173 ACPRIEALELVNPEIAMSDAMVTVELSSSTLKSVYVEAISLDKF-------ILEADGIES 225

Query: 224 LEVQGCSWIRVPE---TKHLKNLTISNSAGRVYNIDFG-NLSALEFLSMRGIQWCWDAIC 279
           L ++ C+ + V E      LKN  I + +  V ++D G  +  LE + +      W    
Sbjct: 226 LHLKDCA-LEVFELIGKGTLKNFRIDDVS--VIHLDIGETVENLESVDISNFTIIWPKFY 282

Query: 280 KMLKLASEVKHLYM 293
           +M+  +S +K L +
Sbjct: 283 QMISRSSNLKRLRL 296