Miyakogusa Predicted Gene

Lj6g3v2270990.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2270990.1 Non Characterized Hit- tr|I1KUK6|I1KUK6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20930
PE,81.34,0,Rhomboid-like,NULL; Rhomboid,Peptidase S54, rhomboid
domain; seg,NULL; SUBFAMILY NOT NAMED,NULL; RHO,CUFF.60943.1
         (338 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g081010.1 | S54 family peptidase | HC | chr2:33941444-3394...   442   e-124
Medtr2g081010.2 | S54 family peptidase | HC | chr2:33941449-3394...   370   e-103
Medtr2g081010.3 | S54 family peptidase | HC | chr2:33941449-3394...   276   3e-74
Medtr0024s0260.1 | S54 family peptidase | HC | scaffold0024:1133...    87   2e-17
Medtr0024s0260.2 | S54 family peptidase | HC | scaffold0024:1134...    80   2e-15
Medtr7g498280.1 | inactive rhomboid-like protein | HC | chr7:392...    67   3e-11
Medtr2g103600.1 | S54 family peptidase | HC | chr2:44609705-4460...    59   5e-09
Medtr1g101310.1 | inactive rhomboid-like protein | HC | chr1:457...    58   1e-08
Medtr2g097210.1 | inactive rhomboid-like protein | HC | chr2:415...    57   2e-08
Medtr2g097210.2 | inactive rhomboid-like protein | HC | chr2:415...    57   3e-08
Medtr7g061780.1 | S54 family peptidase | HC | chr7:22356603-2235...    57   3e-08
Medtr3g073530.1 | inactive rhomboid-like protein | HC | chr3:331...    56   6e-08
Medtr4g021755.1 | inactive rhomboid-like protein | HC | chr4:721...    55   7e-08

>Medtr2g081010.1 | S54 family peptidase | HC |
           chr2:33941444-33945526 | 20130731
          Length = 327

 Score =  442 bits (1138), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 232/331 (70%), Positives = 256/331 (77%), Gaps = 7/331 (2%)

Query: 8   PQPFLSPVYKAGPYPLDLIATAACXXXXXXXXXXXXXXXXXXSCLKKLAPLHRHVFKLKD 67
           P+PFLSPV K GPYPLD+IATAA                   SC +KLAP    VF+LKD
Sbjct: 4   PKPFLSPVCKVGPYPLDIIATAASFHFSHRVSHRLRLHFLLRSCFQKLAP----VFRLKD 59

Query: 68  KWCQRCLQLEGMNYLLSSSDDLASTCSTXXXXXXXXXXXXXXXXAGMSDSKMSGKNPFNR 127
           KWCQ+ LQL+G+NYL  SSD L S CST                +G SDSKMS KNPFN 
Sbjct: 60  KWCQKYLQLKGLNYLQLSSDGLTSACSTSFSFFNGGRPEAS---SGNSDSKMSRKNPFNG 116

Query: 128 RKWTNILLAANVLFFIAQLATQGKLLLWGAKVNSLIDKGQIWRLATSSFLHANIGHLMIN 187
           RKWTNILLAANVLF++AQLATQGKLL WGAKVNSLIDKGQ+WRL TSSFLHANIGHLMIN
Sbjct: 117 RKWTNILLAANVLFYVAQLATQGKLLSWGAKVNSLIDKGQVWRLVTSSFLHANIGHLMIN 176

Query: 188 CFSLNSVGPTVERFSGPRRFLAVYFISAIASSAMSYWFCKMPAVGASGAIFGLVGSVAVF 247
           C+SLNSVGPTVE FSGPRR+LA+YF S+IAS+AMSY FCKMPAVGASGAIFGLVGSVAVF
Sbjct: 177 CYSLNSVGPTVESFSGPRRYLAIYFASSIASAAMSYRFCKMPAVGASGAIFGLVGSVAVF 236

Query: 248 VLRHRDIVGGGKEDLQHIARVIVLNMVIGILSRGIDNWXXXXXXXXXVAASWLIGPAWKH 307
           VLRH+D+VGGGK+DLQHIA+VI LN+ IG+ S GIDNW         +AASWLIGPAWKH
Sbjct: 237 VLRHKDLVGGGKKDLQHIAQVIALNLAIGLSSTGIDNWGHLGGLIGGIAASWLIGPAWKH 296

Query: 308 ESTSWDGRRIFTDSAPMYTLLKIRRVPKQWK 338
           ESTS DGRR+F DSAPMY L KI RVPK WK
Sbjct: 297 ESTSLDGRRLFIDSAPMYNLFKITRVPKPWK 327


>Medtr2g081010.2 | S54 family peptidase | HC |
           chr2:33941449-33945526 | 20130731
          Length = 290

 Score =  370 bits (951), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/278 (70%), Positives = 218/278 (78%), Gaps = 7/278 (2%)

Query: 8   PQPFLSPVYKAGPYPLDLIATAACXXXXXXXXXXXXXXXXXXSCLKKLAPLHRHVFKLKD 67
           P+PFLSPV K GPYPLD+IATAA                   SC +KLAP    VF+LKD
Sbjct: 4   PKPFLSPVCKVGPYPLDIIATAASFHFSHRVSHRLRLHFLLRSCFQKLAP----VFRLKD 59

Query: 68  KWCQRCLQLEGMNYLLSSSDDLASTCSTXXXXXXXXXXXXXXXXAGMSDSKMSGKNPFNR 127
           KWCQ+ LQL+G+NYL  SSD L S CST                +G SDSKMS KNPFN 
Sbjct: 60  KWCQKYLQLKGLNYLQLSSDGLTSACSTSFSFFNGGRPEAS---SGNSDSKMSRKNPFNG 116

Query: 128 RKWTNILLAANVLFFIAQLATQGKLLLWGAKVNSLIDKGQIWRLATSSFLHANIGHLMIN 187
           RKWTNILLAANVLF++AQLATQGKLL WGAKVNSLIDKGQ+WRL TSSFLHANIGHLMIN
Sbjct: 117 RKWTNILLAANVLFYVAQLATQGKLLSWGAKVNSLIDKGQVWRLVTSSFLHANIGHLMIN 176

Query: 188 CFSLNSVGPTVERFSGPRRFLAVYFISAIASSAMSYWFCKMPAVGASGAIFGLVGSVAVF 247
           C+SLNSVGPTVE FSGPRR+LA+YF S+IAS+AMSY FCKMPAVGASGAIFGLVGSVAVF
Sbjct: 177 CYSLNSVGPTVESFSGPRRYLAIYFASSIASAAMSYRFCKMPAVGASGAIFGLVGSVAVF 236

Query: 248 VLRHRDIVGGGKEDLQHIARVIVLNMVIGILSRGIDNW 285
           VLRH+D+VGGGK+DLQHIA+VI LN+ IG+ S GIDNW
Sbjct: 237 VLRHKDLVGGGKKDLQHIAQVIALNLAIGLSSTGIDNW 274


>Medtr2g081010.3 | S54 family peptidase | HC |
           chr2:33941449-33945526 | 20130731
          Length = 217

 Score =  276 bits (705), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 142/218 (65%), Positives = 160/218 (73%), Gaps = 7/218 (3%)

Query: 8   PQPFLSPVYKAGPYPLDLIATAACXXXXXXXXXXXXXXXXXXSCLKKLAPLHRHVFKLKD 67
           P+PFLSPV K GPYPLD+IATAA                   SC +KLAP    VF+LKD
Sbjct: 4   PKPFLSPVCKVGPYPLDIIATAASFHFSHRVSHRLRLHFLLRSCFQKLAP----VFRLKD 59

Query: 68  KWCQRCLQLEGMNYLLSSSDDLASTCSTXXXXXXXXXXXXXXXXAGMSDSKMSGKNPFNR 127
           KWCQ+ LQL+G+NYL  SSD L S CST                +G SDSKMS KNPFN 
Sbjct: 60  KWCQKYLQLKGLNYLQLSSDGLTSACSTSFSFFNGGRPEAS---SGNSDSKMSRKNPFNG 116

Query: 128 RKWTNILLAANVLFFIAQLATQGKLLLWGAKVNSLIDKGQIWRLATSSFLHANIGHLMIN 187
           RKWTNILLAANVLF++AQLATQGKLL WGAKVNSLIDKGQ+WRL TSSFLHANIGHLMIN
Sbjct: 117 RKWTNILLAANVLFYVAQLATQGKLLSWGAKVNSLIDKGQVWRLVTSSFLHANIGHLMIN 176

Query: 188 CFSLNSVGPTVERFSGPRRFLAVYFISAIASSAMSYWF 225
           C+SLNSVGPTVE FSGPRR+LA+YF S+IAS+ + Y +
Sbjct: 177 CYSLNSVGPTVESFSGPRRYLAIYFASSIASNHLYYSY 214


>Medtr0024s0260.1 | S54 family peptidase | HC |
           scaffold0024:113389-116979 | 20130731
          Length = 421

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 1/160 (0%)

Query: 153 LLWGAKVNSLIDKGQIWRLATSSFLHANIGHLMINCFSLNSVGPTVERFSGPRRFLAVYF 212
           +L+GAK+N LI  G+ WRL T  FLHA I H+ ++C++L S GP V +  G   F  +Y 
Sbjct: 204 MLYGAKINHLIMVGEWWRLITPMFLHAGIFHMALSCWALVSFGPQVCKGYGSFTFFLIYI 263

Query: 213 ISAIASSAMSYWFCKMPAVGASGAIFGLVGSVAVFVLRHRDIVGGGKEDLQHIARVIVLN 272
           +  ++ +  S+     P VG +G  F ++G+  ++ +++RD++     D      +I+  
Sbjct: 264 LGGVSGNLASFLHTPDPTVGGTGPAFAIIGAWLMYQIQNRDVIENDDSDNLFKKAIIITA 323

Query: 273 MVIGILSRG-IDNWXXXXXXXXXVAASWLIGPAWKHESTS 311
           +   + + G ID W         +A  +L  PA + + TS
Sbjct: 324 LGFILCNLGPIDEWSHSGAAFTGMAYGFLTSPALQLDETS 363


>Medtr0024s0260.2 | S54 family peptidase | HC |
           scaffold0024:113404-116979 | 20130731
          Length = 356

 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 1/134 (0%)

Query: 153 LLWGAKVNSLIDKGQIWRLATSSFLHANIGHLMINCFSLNSVGPTVERFSGPRRFLAVYF 212
           +L+GAK+N LI  G+ WRL T  FLHA I H+ ++C++L S GP V +  G   F  +Y 
Sbjct: 204 MLYGAKINHLIMVGEWWRLITPMFLHAGIFHMALSCWALVSFGPQVCKGYGSFTFFLIYI 263

Query: 213 ISAIASSAMSYWFCKMPAVGASGAIFGLVGSVAVFVLRHRDIVGGGKEDLQHIARVIVLN 272
           +  ++ +  S+     P VG +G  F ++G+  ++ +++RD++     D      +I+  
Sbjct: 264 LGGVSGNLASFLHTPDPTVGGTGPAFAIIGAWLMYQIQNRDVIENDDSDNLFKKAIIITA 323

Query: 273 MVIGILSRG-IDNW 285
           +   + + G ID W
Sbjct: 324 LGFILCNLGPIDEW 337


>Medtr7g498280.1 | inactive rhomboid-like protein | HC |
           chr7:39278810-39283545 | 20130731
          Length = 326

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 73/129 (56%), Gaps = 2/129 (1%)

Query: 158 KVNSLIDKGQIWRLATSSFLHANIGHLMINCFSLNSVGPTVERFSGPRRFLAVYFISAIA 217
           K +++++  Q WRL +  +LHA I HL  N  SL  +G  +E+  G  R   VY +S   
Sbjct: 104 KWDAVVNHHQGWRLVSCIWLHAGIIHLAANMISLVFIGIRLEQQFGFVRIGIVYLVSGFG 163

Query: 218 SSAMSYWFC-KMPAVGASGAIFGLVGSVAVFVLRHRDIVGGGKEDLQHIARVIVLNMVIG 276
            S +S  F  K  +VGASGA+FGL+G++   ++ +  I       L  +  +IV+N+VIG
Sbjct: 164 GSILSALFIRKSISVGASGALFGLLGAMLSELITNWSIYTNKVAALMTLLFIIVINLVIG 223

Query: 277 ILSRGIDNW 285
           +L   +DN+
Sbjct: 224 MLPH-VDNF 231


>Medtr2g103600.1 | S54 family peptidase | HC |
           chr2:44609705-44607548 | 20130731
          Length = 316

 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 7/129 (5%)

Query: 162 LIDKGQIWRLATSSFLHANIGHLMINCFSLNSVGPTVERFSGPRRFLAVYFISAIASSAM 221
           ++ + ++WR  T  FLHA + HL+ N FSL  +G  +E   G  +   +Y +S    S +
Sbjct: 103 VVGENEVWRFITCMFLHAGVIHLLANMFSLLFIGVRLENEFGFLKIGVLYLLSGFGGSLL 162

Query: 222 SYWF---CKMP---AVGASGAIFGLVGSVAVFVLRHRDIVGGGKEDLQHIARVIVLNMVI 275
           S       K P   +VGASGA+FGL+G++   +L +  I       L  +  +I LN+ +
Sbjct: 163 SILHMGDVKAPNTVSVGASGALFGLLGAMLSELLTNWTIYLNKCAALTSLLLIIGLNLAV 222

Query: 276 GILSRGIDN 284
           G +   +DN
Sbjct: 223 GFIPH-VDN 230


>Medtr1g101310.1 | inactive rhomboid-like protein | HC |
           chr1:45761926-45764419 | 20130731
          Length = 319

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 2/125 (1%)

Query: 161 SLIDKGQIWRLATSSFLHANIGHLMINCFSLNSVGPTVERFSGPRRFLAVYFISAIASSA 220
           +++ + Q WRL T  +LHA I HL+ N   L  +G  +E+  G  +   +Y +S    S 
Sbjct: 108 NVVHQHQEWRLFTCIWLHAGIIHLLSNMLCLVLIGIRLEQQFGFVKIGLIYLLSGFGGSV 167

Query: 221 MSYWFCKMP-AVGASGAIFGLVGSVAVFVLRHRDIVGGGKEDLQHIARVIVLNMVIGILS 279
            S  F +   +VGAS A+FGL+G++   +L +  I       L  +  +I +N+ IG+L 
Sbjct: 168 FSSIFIRNSISVGASSALFGLLGAMISELLTNWTIYSNKVMALLTLLVMIAINLTIGLLP 227

Query: 280 RGIDN 284
           R +DN
Sbjct: 228 R-VDN 231


>Medtr2g097210.1 | inactive rhomboid-like protein | HC |
           chr2:41509279-41506033 | 20130731
          Length = 383

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 69/129 (53%), Gaps = 2/129 (1%)

Query: 158 KVNSLIDKGQIWRLATSSFLHANIGHLMINCFSLNSVGPTVERFSGPRRFLAVYFISAIA 217
           +V+ ++ + + WRL +  +LH    H++ N  SL  +G  +E+  G  R   +Y IS   
Sbjct: 111 EVDKVVHEHEGWRLVSCIWLHGGAIHVLANMLSLLFIGIRLEQEFGFVRIGFLYVISGFG 170

Query: 218 SSAMSYWFCKMP-AVGASGAIFGLVGSVAVFVLRHRDIVGGGKEDLQHIARVIVLNMVIG 276
            S +S  F +   +VGASGA+FGL+G +   +  +  I       L  +  ++V+N+ +G
Sbjct: 171 GSLLSSLFIQTGISVGASGALFGLLGGMLSELFINWTIYANKMAALLTLIIIVVINLAVG 230

Query: 277 ILSRGIDNW 285
           +L   +DN+
Sbjct: 231 VLPH-VDNF 238


>Medtr2g097210.2 | inactive rhomboid-like protein | HC |
           chr2:41509232-41506033 | 20130731
          Length = 300

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 69/129 (53%), Gaps = 2/129 (1%)

Query: 158 KVNSLIDKGQIWRLATSSFLHANIGHLMINCFSLNSVGPTVERFSGPRRFLAVYFISAIA 217
           +V+ ++ + + WRL +  +LH    H++ N  SL  +G  +E+  G  R   +Y IS   
Sbjct: 111 EVDKVVHEHEGWRLVSCIWLHGGAIHVLANMLSLLFIGIRLEQEFGFVRIGFLYVISGFG 170

Query: 218 SSAMSYWFCKMP-AVGASGAIFGLVGSVAVFVLRHRDIVGGGKEDLQHIARVIVLNMVIG 276
            S +S  F +   +VGASGA+FGL+G +   +  +  I       L  +  ++V+N+ +G
Sbjct: 171 GSLLSSLFIQTGISVGASGALFGLLGGMLSELFINWTIYANKMAALLTLIIIVVINLAVG 230

Query: 277 ILSRGIDNW 285
           +L   +DN+
Sbjct: 231 VLPH-VDNF 238


>Medtr7g061780.1 | S54 family peptidase | HC |
           chr7:22356603-22354034 | 20130731
          Length = 335

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 2/128 (1%)

Query: 159 VNSLIDKGQIWRLATSSFLHANIGHLMINCFSLNSVGPTVERFSGPRRFLAVYFISAIAS 218
           V+ ++ + Q WRL T  +LH  + HL+ N   +  VG  +E+  G      +Y IS    
Sbjct: 92  VHQVVYRHQGWRLMTCMWLHGGVFHLLANMLGILVVGIRLEQDFGFVLIGVLYVISGFGG 151

Query: 219 SAMSYWFCKMP-AVGASGAIFGLVGSVAVFVLRHRDIVGGGKEDLQHIARVIVLNMVIGI 277
           S +S  F +   +VGAS A+FGL+G++   ++ +  I       L  +  +IV+N+ +GI
Sbjct: 152 SLLSSLFIQQRISVGASSALFGLLGAMLSELITNWSIYEKRLGTLITLVSIIVINLAVGI 211

Query: 278 LSRGIDNW 285
               +DN+
Sbjct: 212 FPH-VDNF 218


>Medtr3g073530.1 | inactive rhomboid-like protein | HC |
           chr3:33161562-33158511 | 20130731
          Length = 379

 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 160 NSLIDKGQIWRLATSSFLHANIGHLMINCFSLNSVGPTVERFSGPRRFLAVYFISAIASS 219
           N L ++ Q WRL T  FLHA + HL+IN  S+  VG  +E+  GP R   VY +SA   +
Sbjct: 108 NFLTERHQTWRLFTFPFLHAGLFHLVINLCSVIYVGIRLEQEFGPLRIGIVYILSAFVGA 167

Query: 220 AMSYWFCK-MPAVGAS 234
            M+  F + +P VG+S
Sbjct: 168 LMASLFLQNIPVVGSS 183


>Medtr4g021755.1 | inactive rhomboid-like protein | HC |
           chr4:7215110-7210484 | 20130731
          Length = 399

 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 2/128 (1%)

Query: 159 VNSLIDKGQIWRLATSSFLHANIGHLMINCFSLNSVGPTVERFSGPRRFLAVYFISAIAS 218
           V+ ++   Q WRL T  +LH  + HL+ N   +  +G  +E+  G      ++ IS    
Sbjct: 108 VDKVVHGHQGWRLITCMWLHGGVFHLLANMLGILFIGIRLEQEFGFVLIGLLFVISGFGG 167

Query: 219 SAMSYWFCKMP-AVGASGAIFGLVGSVAVFVLRHRDIVGGGKEDLQHIARVIVLNMVIGI 277
           S +S  F +   +VGASGA+FGL+G++   ++ +  +       L  +  +IV+N+ IGI
Sbjct: 168 SLLSALFIQSNISVGASGALFGLLGAMLSELITNWSMYDNKIAALFTLVIIIVVNLAIGI 227

Query: 278 LSRGIDNW 285
           L   +DN+
Sbjct: 228 LPH-VDNF 234