Miyakogusa Predicted Gene

Lj6g3v2222110.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2222110.1 Non Characterized Hit- tr|I1IAC3|I1IAC3_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,68.12,2e-19,UCR_hinge,Ubiquinol-cytochrome C reductase hinge
domain; Non-heme 11 kDa protein of cytochrome bc1 c,CUFF.60919.1
         (69 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g008070.1 | cytochrome B-c1 complex subunit 6 | HC | chr2:...   130   3e-31

>Medtr2g008070.1 | cytochrome B-c1 complex subunit 6 | HC |
           chr2:1272662-1276151 | 20130731
          Length = 122

 Score =  130 bits (326), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 60/68 (88%), Positives = 64/68 (94%)

Query: 2   ADEEPVDPKGYLEESCKPKCVKPLLEYQACVKRIHGDETGQKHCTGQYFDYWACVDKCVA 61
           ADEEPVDPK  LEESCKPKCV+PLLEYQAC+KRI GD++GQKHCTGQYFDYW CVDKCVA
Sbjct: 55  ADEEPVDPKKLLEESCKPKCVRPLLEYQACIKRIQGDDSGQKHCTGQYFDYWYCVDKCVA 114

Query: 62  PKLFTKLK 69
           PKLFTKLK
Sbjct: 115 PKLFTKLK 122