Miyakogusa Predicted Gene

Lj6g3v2221990.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2221990.1 tr|I3S0L6|I3S0L6_LOTJA Methylenetetrahydrofolate
reductase OS=Lotus japonicus PE=2
SV=1,99.69,0,METHYLENETETRAHYDROFOLATE REDUCTASE,NULL;
METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE
RELA,CUFF.60905.1
         (323 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g040105.1 | methylenetetrahydrofolate reductase | HC | chr...   580   e-166
Medtr5g007060.1 | methylenetetrahydrofolate reductase | LC | chr...    91   2e-18

>Medtr1g040105.1 | methylenetetrahydrofolate reductase | HC |
           chr1:14723769-14718084 | 20130731
          Length = 595

 Score =  580 bits (1494), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 276/327 (84%), Positives = 299/327 (91%), Gaps = 5/327 (1%)

Query: 1   MKVIEKIHEAAASDPNKVVFSFEFFPPKTEDGVVNLLERMDRMVAHSPSFCDITWGAGGS 60
           MKVI+KI  A A DPNKVVFSFEFFPPKTEDGV NL ERMDRMVAH+PSFCDITWGAGG+
Sbjct: 1   MKVIDKIRSANA-DPNKVVFSFEFFPPKTEDGVDNLFERMDRMVAHNPSFCDITWGAGGT 59

Query: 61  TADVTLDIAKKMQNTVGVETMMHLTCTNMPVEKIDDALETIKSNGLQNVLALRGDPPHGQ 120
           TAD+TL+IA KMQN + VETMMHLTCTNMPV+KID ALETIKSNG+QNVLALRGDPPHGQ
Sbjct: 60  TADLTLEIANKMQNIICVETMMHLTCTNMPVDKIDHALETIKSNGIQNVLALRGDPPHGQ 119

Query: 121 DKFVQVEGGFACARDLVKHIRAKHGDYFGITIAGYPEAHPDAIGSNGLATPEDYQNDLTY 180
           +KFVQ EGGFACARDLV+HIR+K+GDYFGITIAGYPEAHPD IG++GLAT E YQ+DL Y
Sbjct: 120 EKFVQTEGGFACARDLVQHIRSKYGDYFGITIAGYPEAHPDVIGADGLATAEGYQSDLAY 179

Query: 181 LKSKVDAGADLIITQLFYDTDIFLKFANDCRQIGITCPIVPGIMPINNYKGFIRMTGFCK 240
           LKSKVDAGADLI+TQLFYDTDIFLKF NDCRQIGITCPIVPGIMPINNYKGFIRMTGFCK
Sbjct: 180 LKSKVDAGADLIVTQLFYDTDIFLKFVNDCRQIGITCPIVPGIMPINNYKGFIRMTGFCK 239

Query: 241 TKIPAEIMAALEPIKDNEEAVKAYGIHLGTEMCKKILAHGFKTLHLYTLNLEKSALAILK 300
           TKIPAEIMAALEPIKDNEEAVKAYGIHLGTEMCKKI+AHG KT+HLYTLN+EKSALAIL 
Sbjct: 240 TKIPAEIMAALEPIKDNEEAVKAYGIHLGTEMCKKIMAHGIKTVHLYTLNMEKSALAILT 299

Query: 301 NLGLIEET----SIPRTRPANAIQAKE 323
           +LGLIEE+    S+P  RP N  + KE
Sbjct: 300 SLGLIEESKISRSLPWRRPTNVFRVKE 326


>Medtr5g007060.1 | methylenetetrahydrofolate reductase | LC |
           chr5:1192998-1190936 | 20130731
          Length = 267

 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/48 (85%), Positives = 44/48 (91%)

Query: 89  MPVEKIDDALETIKSNGLQNVLALRGDPPHGQDKFVQVEGGFACARDL 136
           MPV+KID ALETIKSN +QNVLALRGDPPHGQ+KFVQ  GGFACARDL
Sbjct: 1   MPVDKIDHALETIKSNEIQNVLALRGDPPHGQEKFVQTGGGFACARDL 48